Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g044380 Medicago truncatula HOM05D013293 ORTHO05D015165 1.3e-123 446.4 226 100.0
Medtr5g044340 Medicago truncatula HOM05D013293 ORTHO05D015165 1.8e-56 223.4 228 60.5
Medtr5g043500 Medicago truncatula HOM05D013293 ORTHO05D015165 1.2e-49 200.7 205 55.6
Medtr5g044470 Medicago truncatula HOM05D013293 ORTHO05D015165 2.7e-49 199.5 160 65.6
Medtr5g044450 Medicago truncatula HOM05D013293 ORTHO05D015165 3.9e-48 195.7 162 64.8
Medtr5g044350 Medicago truncatula HOM05D013293 ORTHO05D015165 6.7e-48 194.9 202 54.5
Medtr4g113220 Medicago truncatula HOM05D013293 ORTHO05D015165 9.7e-47 191.0 161 65.2
Medtr5g093120 Medicago truncatula HOM05D013293 ORTHO05D015165 6.3e-22 108.6 199 40.7
Medtr5g093190 Medicago truncatula HOM05D013293 ORTHO05D015165 7.7e-20 101.7 214 36.0
Medtr5g093150 Medicago truncatula HOM05D013293 ORTHO05D015165 9.4e-18 94.7 186 36.0
Medtr7g106100 Medicago truncatula HOM05D002687 ORTHO05D002052 1.8e-13 80.5 201 28.9
Psat6g069120 Pisum sativum HOM05D013293 ORTHO05D015165 1.8e-13 80.5 164 38.4
TPR.G35571 Trifolium pratense HOM05D002687 ORTHO05D002052 5.4e-13 79.0 203 32.0
Medtr5g093140 Medicago truncatula HOM05D013293 ORTHO05D015165 1.6e-12 77.4 158 35.4
Psat0s3916g0200 Pisum sativum HOM05D002687 ORTHO05D002052 1.3e-11 74.3 204 32.4
Cfa016686 Carpinus fangiana HOM05D002687 ORTHO05D002052 6.5e-11 72.0 158 31.6
FvH4_6g20177 Fragaria vesca HOM05D002687 ORTHO05D002052 1.9e-10 70.5 145 30.3
FAN14G3199 Fragaria x ananassa HOM05D029328 ORTHO05D002052 1.9e-10 70.5 145 30.3
Ca_09050_v3 Cicer arietinum L. HOM05D002687 ORTHO05D002052 2.1e-09 67.0 163 30.1
Psat7g254840 Pisum sativum HOM05D014482 ORTHO05D019002 2.7e-09 66.6 161 31.1
Medtr4g011390 Medicago truncatula HOM05D014482 ORTHO05D019002 6.1e-09 65.5 139 35.3
RcHm_v2.0_Chr3g0475711 Rosa chinensis HOM05D002687 ORTHO05D002052 1.0e-08 64.7 188 28.7
Cpa.g.sc1142.1 Carica papaya HOM05D002687 ORTHO05D002052 1.4e-08 64.3 144 31.9
Nn6g34716 Nelumbo nucifera HOM05D002687 ORTHO05D002052 1.8e-08 63.9 157 28.7
Prupe.7G097000 Prunus persica HOM05D002687 ORTHO05D002052 1.8e-08 63.9 139 28.8
CiPaw.09G020300 Carya illinoinensis HOM05D002687 ORTHO05D002052 3.0e-08 63.2 158 31.0
QL07p036935 Quercus lobata HOM05D002687 ORTHO05D002052 5.2e-08 62.4 144 25.7
BcaC02g10865 Brassica carinata HOM05D002687 ORTHO05D002052 2.6e-07 60.1 132 28.8
C04p24310 Brassica napus HOM05D002687 ORTHO05D002052 2.6e-07 60.1 132 28.8
BolC4t23929H Brassica oleracea HOM05D002687 ORTHO05D002052 2.6e-07 60.1 132 28.8
TAR369G0448 Trochodendron aralioides HOM05D002687 ORTHO05D002052 4.4e-07 59.3 157 26.1
A07p18100 Brassica napus HOM05D002687 ORTHO05D002052 5.7e-07 58.9 130 29.2
BraA07t29528Z Brassica rapa HOM05D002687 ORTHO05D002052 7.5e-07 58.5 130 29.2
Dinv08137 Davidia involucrata HOM05D002687 ORTHO05D002052 7.5e-07 58.5 142 26.1
CiPaw.10G094600 Carya illinoinensis HOM05D002687 ORTHO05D002052 9.8e-07 58.2 158 29.1
Nn2g14281 Nelumbo nucifera HOM05D002687 ORTHO05D002052 9.8e-07 58.2 186 26.3
PSO339G2661 Papaver somniferum HOM05D002687 ORTHO05D002052 9.8e-07 58.2 143 25.2
Sc21g0006860 Simmondsia chinensis HOM05D002687 ORTHO05D002052 1.3e-06 57.8 129 28.7
Ah.15g100060 Amaranthus hybridus HOM05D002687 ORTHO05D002052 1.7e-06 57.4 144 27.1
Medtr3g102440 Medicago truncatula HOM05D014482 ORTHO05D019002 2.2e-06 57.0 201 27.4
Rhsim01G0201900 Rhododendron simsii HOM05D002687 ORTHO05D002052 2.2e-06 57.0 141 28.4
Cpa.g.sc104.46 Carica papaya HOM05D002687 ORTHO05D002052 2.8e-06 56.6 185 26.5
TAR623G1724 Trochodendron aralioides HOM05D002687 ORTHO05D002052 3.7e-06 56.2 156 25.0
Ca_04960_v3 Cicer arietinum L. HOM05D014482 ORTHO05D019002 4.9e-06 55.8 195 28.2
Dinv31751 Davidia involucrata HOM05D002687 ORTHO05D002052 4.9e-06 55.8 133 25.6
TAR633G0261 Trochodendron aralioides HOM05D002687 ORTHO05D002052 8.3e-06 55.1 156 25.6


User provided reference genes

Program Settings