Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g039510 Medicago truncatula HOM05D005718 ORTHO05D004853 4.4e-253 877.5 443 100.0
Medtr5g039515 Medicago truncatula HOM05D005718 ORTHO05D004853 2.5e-99 366.7 374 55.3
TPR.G18060 Trifolium pratense HOM05D001219 ORTHO05D001017 2.3e-28 131.0 215 36.7
TPR.G18912 Trifolium pratense HOM05D005718 ORTHO05D004853 9.8e-27 125.6 232 34.1
Medtr8g469580 Medicago truncatula HOM05D012339 ORTHO05D004853 8.9e-20 102.4 205 32.7
Medtr5g095400 Medicago truncatula HOM05D005718 ORTHO05D004853 3.4e-19 100.5 216 30.1
Medtr5g095430 Medicago truncatula HOM05D005718 ORTHO05D004853 7.5e-19 99.4 216 30.1
TPR.G14209 Trifolium pratense HOM05D012339 ORTHO05D004853 1.7e-18 98.2 267 30.7
Ca_28401_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.2e-18 97.8 209 31.6
Ca_02739_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.7e-18 97.1 239 31.0
Ca_11946_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.9e-18 96.7 223 31.4
TPR.G8591 Trifolium pratense HOM05D005718 ORTHO05D004853 8.3e-18 95.9 234 29.5
Ca_02193_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.4e-17 95.1 221 31.2
TPR.G8600 Trifolium pratense HOM05D005718 ORTHO05D004853 1.8e-17 94.7 226 28.8
Ca_12186_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.1e-17 93.6 209 32.1
Ca_03088_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.4e-17 93.2 239 31.0
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 7.0e-17 92.8 211 30.8
Ca_28548_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.2e-17 92.4 209 31.6
Ca_02735_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.2e-16 92.0 193 33.7
Medtr5g095330 Medicago truncatula HOM05D005718 ORTHO05D004853 1.2e-16 92.0 212 29.2
Ca_20280_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.6e-16 91.7 239 28.0
Ca_20635_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.6e-16 91.7 239 30.5
Medtr8g056180 Medicago truncatula HOM05D012339 ORTHO05D004853 1.6e-16 91.7 222 29.7
Ca_13647_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.0e-16 91.3 241 30.7
Medtr1g044605 Medicago truncatula HOM05D012339 ORTHO05D004853 2.0e-16 91.3 230 29.6
Medtr6g088860 Medicago truncatula HOM05D012339 ORTHO05D004853 2.7e-16 90.9 242 29.8
Medtr6g466450 Medicago truncatula HOM05D012339 ORTHO05D004853 2.7e-16 90.9 242 29.8
Ca_01955_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.6e-16 90.1 218 30.7
Ca_05501_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.6e-16 90.1 215 30.7
Ca_27869_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.6e-16 90.1 269 29.4
Ca_12054_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.9e-16 89.7 187 34.2
Ca_14684_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 7.8e-16 89.4 190 33.7
Ca_24171_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.0e-15 89.0 193 31.1
Ca_19825_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.3e-15 88.6 269 28.6
Medtr0126s0010 Medicago truncatula HOM05D012339 ORTHO05D004853 1.7e-15 88.2 144 38.9
TPR.G8609 Trifolium pratense HOM05D005718 ORTHO05D004853 1.7e-15 88.2 219 28.8
Ca_27659_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.0e-15 86.7 194 30.9
Ca_20722_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.6e-15 86.3 193 30.1
Ca_28538_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.6e-15 86.3 187 32.1
TPR.G30973 Trifolium pratense HOM05D005718 ORTHO05D004853 6.6e-15 86.3 231 30.3
Ca_19976_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.1e-14 85.5 219 30.6
Ca_24064_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.5e-14 85.1 178 33.7
Ca_14596_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.5e-14 84.3 192 31.2
Ca_26688_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.3e-14 84.0 217 29.0
Ca_26948_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.3e-14 84.0 195 30.3
Ca_08870_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.6e-14 83.2 170 32.4
Ca_23989_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 7.3e-14 82.8 190 31.6
VMungo0251G0465 Vigna mungo HOM05D009155 ORTHO05D004853 2.1e-13 81.3 233 27.0
Ca_07541_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.6e-13 80.5 189 33.3
VMungo0647G1863 Vigna mungo HOM05D009155 ORTHO05D004853 3.6e-13 80.5 232 25.9
VMungo1383G1533 Vigna mungo HOM05D009155 ORTHO05D004853 1.4e-12 78.6 232 25.0
Ca_12947_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.3e-12 77.8 163 31.9
Medtr5g079810 Medicago truncatula HOM05D012339 ORTHO05D004853 3.1e-12 77.4 174 33.3
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 3.1e-12 77.4 266 27.4
Medtr5g095270 Medicago truncatula HOM05D005718 ORTHO05D004853 4.0e-12 77.0 158 29.7
arahy.Tifrunner.gnm1.ann1.I277IB Arachis hypogaea HOM05D005718 ORTHO05D004853 5.2e-12 76.6 210 28.6
Medtr7g070630 Medicago truncatula HOM05D012339 ORTHO05D004853 1.2e-11 75.5 255 28.6
arahy.Tifrunner.gnm1.ann1.F53IXF Arachis hypogaea HOM05D005718 ORTHO05D004853 3.4e-11 73.9 210 28.1
Ca_26515_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 9.8e-11 72.4 201 28.9
Ca_17770_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.2e-10 71.2 236 26.3
Ca_16582_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.4e-10 69.7 212 27.8
Ca_05037_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 1.4e-09 68.6 166 30.1
Medtr5g095310 Medicago truncatula HOM05D005718 ORTHO05D004853 2.4e-09 67.8 155 30.3
PGSC0003DMG400037716 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.4e-09 67.8 185 23.8
Ca_27856_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.4e-09 66.6 209 27.8
Ca_05339_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 7.0e-09 66.2 212 27.4
Medtr6g023550 Medicago truncatula HOM05D005718 ORTHO05D004853 9.2e-09 65.9 168 29.2
Medtr3g455890 Medicago truncatula HOM05D012339 ORTHO05D004853 1.2e-08 65.5 185 28.1
TPR.G929 Trifolium pratense HOM05D067369 ORTHO05D004853 1.2e-08 65.5 117 32.5
Ca_18815_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.0e-08 64.7 202 27.7
Ca_31245_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.0e-08 64.7 138 33.3
Ca_02606_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.6e-08 63.5 127 34.6
Ca_12320_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 7.8e-08 62.8 126 33.3
Medtr8g009850 Medicago truncatula HOM05D005718 ORTHO05D004853 1.0e-07 62.4 212 24.1
Ca_31163_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.7e-07 61.6 126 33.3
arahy.Tifrunner.gnm1.ann1.N9HB9M Arachis hypogaea HOM05D005718 ORTHO05D004853 3.0e-07 60.8 224 25.9
Ca_02986_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.0e-07 60.8 215 28.4
PGSC0003DMG400034761 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.0e-07 60.1 183 24.0
PGSC0003DMG400038274 Solanum tuberosum HOM05D003150 ORTHO05D003532 6.6e-07 59.7 194 23.7
Medtr3g080720 Medicago truncatula HOM05D012339 ORTHO05D004853 1.1e-06 58.9 182 30.8
Medtr6g065960 Medicago truncatula HOM05D012339 ORTHO05D004853 1.1e-06 58.9 130 31.5
Ca_31178_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.9e-06 58.2 163 28.2
Ca_28531_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.6e-06 56.6 126 31.7
Ca_30618_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.6e-06 56.6 126 31.7
VMungo1383G2102 Vigna mungo HOM05D009155 ORTHO05D004853 7.3e-06 56.2 222 23.9


User provided reference genes

Program Settings