Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g037140 Medicago truncatula HOM05D004965 ORTHO05D004401 7.2e-60 233.8 125 100.0
Psat2g116360 Pisum sativum HOM05D004965 ORTHO05D004401 3.1e-31 138.7 111 68.5
Lj2g0004313 Lotus japonicus HOM05D004965 ORTHO05D004401 4.4e-25 118.2 105 68.6
Glyma.02G025700 Glycine max HOM05D004965 ORTHO05D004401 3.0e-21 105.5 98 61.2
Lalb_Chr09g0326631 Lupinus albus HOM05D004965 ORTHO05D004401 1.1e-20 103.6 113 54.0
Phvul.002G079000 Phaseolus vulgaris HOM05D004965 ORTHO05D004401 5.6e-20 101.3 111 57.7
Glyma.01G038900 Glycine max HOM05D004965 ORTHO05D004401 4.7e-19 98.2 100 60.0
Lalb_Chr05g0217401 Lupinus albus HOM05D004965 ORTHO05D004401 6.2e-19 97.8 104 55.8
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 2.0e-17 92.8 107 51.4
Prupe.1G263100 Prunus persica HOM05D004965 ORTHO05D004401 5.4e-15 84.7 98 46.9
Ciclev10033175m.g Citrus clementina HOM05D004965 ORTHO05D004401 2.1e-14 82.8 101 49.5
MD13G1083500 Malus domestica HOM05D004965 ORTHO05D004401 4.6e-14 81.6 98 49.0
Lalb_Chr16g0382641 Lupinus albus HOM05D004965 ORTHO05D004401 6.0e-14 81.3 102 47.1
Duzib248G0243 Durio zibethinus HOM05D004965 ORTHO05D004401 1.0e-13 80.5 117 44.4
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 1.7e-13 79.7 102 51.0
Duzib251G0216 Durio zibethinus HOM05D004965 ORTHO05D004401 5.1e-13 78.2 112 45.5
MD16G1082900 Malus domestica HOM05D004965 ORTHO05D004401 1.1e-12 77.0 97 47.4
Duzib268G0529 Durio zibethinus HOM05D004965 ORTHO05D004401 7.3e-12 74.3 100 48.0
Manes.05G094200 Manihot esculenta HOM05D004965 ORTHO05D004401 7.3e-12 74.3 98 48.0
GSVIVG01020127001 Vitis vinifera HOM05D004965 ORTHO05D004401 1.2e-11 73.6 112 42.9
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 1.6e-11 73.2 97 47.4
Gorai.002G165000 Gossypium raimondii HOM05D004965 ORTHO05D004401 3.6e-11 72.0 115 47.0
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 3.6e-11 72.0 96 46.9
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 6.2e-11 71.2 106 43.4
arahy.Tifrunner.gnm1.ann1.0GIF91 Arachis hypogaea HOM05D004965 ORTHO05D004401 8.1e-11 70.9 111 45.0
CSS0043755 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 8.1e-11 70.9 99 43.4
FvH4_4g35400 Fragaria vesca HOM05D004965 ORTHO05D004401 8.1e-11 70.9 110 42.7
FAN12G3850 Fragaria x ananassa HOM05D004965 ORTHO05D004401 8.1e-11 70.9 97 46.4
Gohir.A01G142000 Gossypium hirsutum HOM05D004965 ORTHO05D004401 8.1e-11 70.9 110 45.5
RcHm_v2.0_Chr4g0445011 Rosa chinensis HOM05D004965 ORTHO05D004401 8.1e-11 70.9 119 40.3
Potri.010G039800 Populus trichocarpa HOM05D004965 ORTHO05D004401 1.1e-10 70.5 110 42.7
FAN07G0801 Fragaria x ananassa HOM05D004965 ORTHO05D004401 2.3e-10 69.3 110 41.8
FAN22G1750 Fragaria x ananassa HOM05D004965 ORTHO05D004401 2.3e-10 69.3 107 42.1
Gohir.A03G144700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 3.1e-10 68.9 58 62.1
Atru.chr11.1915 Acer truncatum HOM05D004965 ORTHO05D004401 4.0e-10 68.6 35 88.6
CsaV3_6G036050 Cucumis sativus L. HOM05D004965 ORTHO05D004401 4.0e-10 68.6 43 76.7
Gohir.D01G133500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 4.0e-10 68.6 108 52.8
CiPaw.05G143500 Carya illinoinensis HOM05D004965 ORTHO05D004401 6.8e-10 67.8 111 42.3
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 8.9e-10 67.4 47 72.3
Aqoxy3G03187 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 1.2e-09 67.0 107 42.1
MELO3C026507.2 Cucumis melo HOM05D004965 ORTHO05D004401 1.2e-09 67.0 43 74.4
Dinv31145 Davidia involucrata HOM05D004965 ORTHO05D004401 1.2e-09 67.0 96 40.6
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 1.5e-09 66.6 97 44.3
CiPaw.06G078100 Carya illinoinensis HOM05D004965 ORTHO05D004401 2.0e-09 66.2 106 40.6
Eucgr.B02578 Eucalyptus grandis HOM05D004965 ORTHO05D004401 2.0e-09 66.2 99 40.4
Gohir.D02G167800 Gossypium hirsutum HOM05D004965 ORTHO05D004401 2.0e-09 66.2 58 58.6
EL10Ac6g13083 Beta vulgaris HOM05D004965 ORTHO05D004401 2.6e-09 65.9 35 82.9
CANSAT01G1612 Cannabis sativa HOM05D004965 ORTHO05D004401 3.4e-09 65.5 130 39.2
MBI01_g13075_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 3.4e-09 65.5 98 42.9
vmacro16304 Vaccinium macrocarpon HOM05D004965 ORTHO05D004401 3.4e-09 65.5 90 44.4
Gorai.005G188200 Gossypium raimondii HOM05D004965 ORTHO05D004401 4.4e-09 65.1 93 43.0
Hund25308 Selenicereus undatus HOM05D004965 ORTHO05D004401 5.8e-09 64.7 34 85.3
DCAR_026576 Daucus carota HOM05D004965 ORTHO05D004401 7.5e-09 64.3 96 39.6
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 1.3e-08 63.5 108 40.7
Actinidia12285 Actinidia chinensis HOM05D004965 ORTHO05D004401 1.7e-08 63.2 87 47.1
ClCG08G009090 Citrullus lanatus HOM05D004965 ORTHO05D004401 1.7e-08 63.2 31 90.3
TAR369G0013 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.7e-08 63.2 98 42.9
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 2.2e-08 62.8 96 43.8
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 2.2e-08 62.8 39 71.8
CSS0011493 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 2.9e-08 62.4 87 46.0
PGR119G0489 Punica granatum HOM05D004965 ORTHO05D004401 3.7e-08 62.0 33 84.8
Sc04g0008760 Simmondsia chinensis HOM05D004965 ORTHO05D004401 4.9e-08 61.6 104 36.5
SalBow8G5011 Salvia bowleyana HOM05D004965 ORTHO05D004401 8.3e-08 60.8 47 57.4
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.4e-07 60.1 97 45.4
PGSC0003DMG400022630 Solanum tuberosum HOM05D004965 ORTHO05D004401 2.4e-07 59.3 96 39.6
Solyc05g006610.4 Solanum lycopersicum HOM05D004965 ORTHO05D004401 3.2e-07 58.9 33 78.8
Sopen05g002550 Solanum pennellii HOM05D004965 ORTHO05D004401 3.2e-07 58.9 33 78.8
HanXRQChr15g0474251 Helianthus annuus HOM05D004965 ORTHO05D004401 4.1e-07 58.5 93 41.9
Lsat_1_v5_gn_8_161261 Lactuca sativa HOM05D004965 ORTHO05D004401 4.1e-07 58.5 99 39.4
Potri.008G191500 Populus trichocarpa HOM05D004965 ORTHO05D004401 5.4e-07 58.2 98 36.7
MSTRG.2369 Avicennia marina HOM05D004965 ORTHO05D004401 9.2e-07 57.4 99 40.4
DCAR_006716 Daucus carota HOM05D004965 ORTHO05D004401 9.2e-07 57.4 88 38.6
Gohir.D07G223500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 9.2e-07 57.4 97 44.3
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 9.2e-07 57.4 41 63.4
Atru.chr8.2466 Acer truncatum HOM05D004965 ORTHO05D004401 1.2e-06 57.0 44 56.8
Actinidia06052 Actinidia chinensis HOM05D004965 ORTHO05D004401 1.2e-06 57.0 88 43.2
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 1.2e-06 57.0 97 40.2
Gorai.001G257800 Gossypium raimondii HOM05D004965 ORTHO05D004401 1.2e-06 57.0 97 44.3
Sabra10G0027200 Salix brachista HOM05D004965 ORTHO05D004401 1.2e-06 57.0 99 39.4
CiPaw.03G032200 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.6e-06 56.6 96 41.7
QL02p079418 Quercus lobata HOM05D004965 ORTHO05D004401 1.6e-06 56.6 96 39.6
TAR622G1192 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.6e-06 56.6 85 41.2
HanXRQChr08g0209111 Helianthus annuus HOM05D004965 ORTHO05D004401 2.7e-06 55.8 29 86.2
TWI36G1294 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 2.7e-06 55.8 34 70.6
ECA246G4714 Erigeron canadensis HOM05D004965 ORTHO05D004401 6.0e-06 54.7 97 39.2
Aqoxy3G00848 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 7.8e-06 54.3 96 37.5
TWI56G0241 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 7.8e-06 54.3 113 34.5


User provided reference genes

Program Settings