Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g034955 Medicago truncatula HOM05D007807 ORTHO05D000006 3.8e-75 284.6 133 100.0
Medtr7g108440 Medicago truncatula HOM05D002777 ORTHO05D001516 3.4e-23 112.1 106 45.3
Medtr3g465440 Medicago truncatula HOM05D000425 ORTHO05D000373 2.9e-19 99.0 94 48.9
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-13 80.5 98 38.8
Phvul.010G087401 Phaseolus vulgaris HOM05D000003 ORTHO05D000006 1.1e-13 80.5 92 42.4
Glyma.10G082200 Glycine max HOM05D002777 ORTHO05D000006 2.7e-12 75.9 91 36.3
Medtr2g067570 Medicago truncatula HOM05D000003 ORTHO05D000006 3.5e-12 75.5 101 38.6
Psat4g225800 Pisum sativum HOM05D007807 ORTHO05D001516 7.8e-12 74.3 120 31.7
Medtr5g038810 Medicago truncatula HOM05D000439 ORTHO05D002302 1.3e-11 73.6 83 44.6
Psat0s3204g0040 Pisum sativum HOM05D007807 ORTHO05D000006 1.7e-11 73.2 120 32.5
Psat3g104680 Pisum sativum HOM05D007807 ORTHO05D001516 1.7e-11 73.2 122 33.6
Psat3g133760 Pisum sativum HOM05D000003 ORTHO05D000004 2.3e-11 72.8 103 32.0
Psat2g036200 Pisum sativum HOM05D007807 ORTHO05D001516 2.9e-11 72.4 98 33.7
Medtr2g105880 Medicago truncatula HOM05D000003 ORTHO05D000006 5.0e-11 71.6 98 36.7
Psat3g173240 Pisum sativum HOM05D000003 ORTHO05D000004 5.0e-11 71.6 116 31.9
Psat2g122120 Pisum sativum HOM05D007807 ORTHO05D001516 6.6e-11 71.2 120 31.7
Psat4g004920 Pisum sativum HOM05D007807 ORTHO05D001516 6.6e-11 71.2 120 31.7
Medtr1g018785 Medicago truncatula HOM05D000003 ORTHO05D000006 8.6e-11 70.9 98 36.7
Lj4g0005812 Lotus japonicus HOM05D007807 ORTHO05D000006 1.1e-10 70.5 92 37.0
Psat6g225440 Pisum sativum HOM05D000003 ORTHO05D000006 1.1e-10 70.5 103 31.1
Psat0s3434g0160 Pisum sativum HOM05D007807 ORTHO05D001516 1.9e-10 69.7 103 31.1
Psat1g199520 Pisum sativum HOM05D007807 ORTHO05D001516 4.3e-10 68.6 120 30.8
Medtr7g451000 Medicago truncatula HOM05D000003 ORTHO05D000006 2.1e-09 66.2 77 45.5
Psat3g174320 Pisum sativum HOM05D007807 ORTHO05D001516 2.1e-09 66.2 121 33.1
Medtr0465s0020 Medicago truncatula HOM05D000003 ORTHO05D000006 6.1e-09 64.7 73 42.5
Medtr0062s0050 Medicago truncatula HOM05D000003 ORTHO05D000006 1.0e-08 63.9 93 38.7
Medtr0062s0080 Medicago truncatula HOM05D000003 ORTHO05D000006 1.0e-08 63.9 93 38.7
Medtr0938s0010 Medicago truncatula HOM05D000003 ORTHO05D000006 1.0e-08 63.9 93 38.7
Medtr7g108760 Medicago truncatula HOM05D008558 ORTHO05D000006 1.0e-08 63.9 98 33.7
Medtr8g058470 Medicago truncatula HOM05D008558 ORTHO05D000006 1.0e-08 63.9 98 33.7
TPR.G18505 Trifolium pratense HOM05D000003 ORTHO05D000004 1.0e-08 63.9 91 34.1
Medtr0032s0100 Medicago truncatula HOM05D000003 ORTHO05D000006 1.4e-08 63.5 93 38.7
Medtr6g016175 Medicago truncatula HOM05D000003 ORTHO05D000006 1.4e-08 63.5 103 36.9
Medtr3g448380 Medicago truncatula HOM05D000003 ORTHO05D000006 1.8e-08 63.2 98 35.7
Psat2g045280 Pisum sativum HOM05D010469 ORTHO05D001516 4.0e-08 62.0 91 34.1
Potri.019G047975 Populus trichocarpa HOM05D000003 ORTHO05D000006 4.0e-08 62.0 123 27.6
Lalb_Chr15g0080611 Lupinus albus HOM05D000003 ORTHO05D000006 5.2e-08 61.6 130 30.0
Psat0s1204g0040 Pisum sativum HOM05D007807 ORTHO05D001516 5.2e-08 61.6 74 37.8
Medtr5g021380 Medicago truncatula HOM05D000003 ORTHO05D000006 6.8e-08 61.2 98 36.7
Medtr7g057470 Medicago truncatula HOM05D000003 ORTHO05D000006 8.9e-08 60.8 96 38.5
Medtr7g057490 Medicago truncatula HOM05D000003 ORTHO05D000006 8.9e-08 60.8 96 38.5
Psat7g033120 Pisum sativum HOM05D007807 ORTHO05D001516 8.9e-08 60.8 76 32.9
Medtr6g048840 Medicago truncatula HOM05D000003 ORTHO05D000006 1.2e-07 60.5 97 34.0
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.0e-07 59.7 97 38.1
Medtr2g035690 Medicago truncatula HOM05D000003 ORTHO05D000006 2.0e-07 59.7 98 31.6
Psat1g154160 Pisum sativum HOM05D000003 ORTHO05D000004 2.0e-07 59.7 93 29.0
Medtr1g040450 Medicago truncatula HOM05D000003 ORTHO05D000006 2.6e-07 59.3 98 35.7
Psat5g290720 Pisum sativum HOM05D000003 ORTHO05D000004 3.4e-07 58.9 85 28.2
HanXRQChr04g0113211 Helianthus annuus HOM05D000003 ORTHO05D000004 7.5e-07 57.8 98 33.7
Potri.005G151275 Populus trichocarpa HOM05D000003 ORTHO05D000006 7.5e-07 57.8 112 29.5
QL10p002846 Quercus lobata HOM05D000003 ORTHO05D000006 7.5e-07 57.8 92 37.0
Medtr0426s0010 Medicago truncatula HOM05D000003 ORTHO05D000006 9.8e-07 57.4 77 39.0
Medtr1g068728 Medicago truncatula HOM05D000003 ORTHO05D000006 9.8e-07 57.4 77 37.7
Psat2g001200 Pisum sativum HOM05D007807 ORTHO05D000006 1.3e-06 57.0 93 31.2
Medtr4g054200 Medicago truncatula HOM05D008558 ORTHO05D000006 1.7e-06 56.6 77 39.0
BolC1t03151H Brassica oleracea HOM05D000003 ORTHO05D000006 2.2e-06 56.2 100 33.0
TPR.G32401 Trifolium pratense HOM05D000003 ORTHO05D000004 2.2e-06 56.2 110 30.0
Dinv23885 Davidia involucrata HOM05D000003 ORTHO05D000007 2.9e-06 55.8 102 34.3
Gohir.A04G039600 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.9e-06 55.8 90 34.4
Potri.004G128860 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.9e-06 55.8 98 28.6
Potri.004G128880 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.9e-06 55.8 98 28.6
Potri.004G128901 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.9e-06 55.8 98 28.6
Potri.004G128921 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.9e-06 55.8 98 28.6
Potri.004G128941 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.9e-06 55.8 98 28.6
Potri.004G128961 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.9e-06 55.8 98 28.6
CANSAT01G1362 Cannabis sativa HOM05D000003 ORTHO05D000006 3.7e-06 55.5 81 37.0
CiPaw.07G196000 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.7e-06 55.5 98 35.7
Dinv10916 Davidia involucrata HOM05D000003 ORTHO05D000006 3.7e-06 55.5 94 27.7
Medtr0032s0090 Medicago truncatula HOM05D000003 ORTHO05D000006 4.9e-06 55.1 93 35.5
Medtr1g062670 Medicago truncatula HOM05D000003 ORTHO05D000006 4.9e-06 55.1 90 31.1
Actinidia24025 Actinidia chinensis HOM05D000003 ORTHO05D000004 6.4e-06 54.7 99 35.4
Hma1.2p1_1077F.1_g254720 Hydrangea macrophylla HOM05D000003 ORTHO05D000006 8.3e-06 54.3 93 36.6
Potri.019G047420 Populus trichocarpa HOM05D000003 ORTHO05D000006 8.3e-06 54.3 93 28.0


User provided reference genes

Program Settings