Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g030990 Medicago truncatula HOM05D007928 ORTHO05D009207 8.4e-69 263.5 124 100.0
TPR.G37018 Trifolium pratense HOM05D007928 ORTHO05D009207 2.0e-46 189.1 102 87.3
Psat2g133800 Pisum sativum HOM05D007928 ORTHO05D009207 3.2e-36 155.2 83 86.7
Glyma.01G020400 Glycine max HOM05D007928 ORTHO05D009207 4.0e-26 121.7 93 63.4
Lj2g0015328 Lotus japonicus HOM05D007928 ORTHO05D009207 4.0e-26 121.7 105 60.0
VMungo1215G2120 Vigna mungo HOM05D007928 ORTHO05D009207 4.0e-26 121.7 95 66.3
Glyma.09G201900 Glycine max HOM05D007928 ORTHO05D009207 6.7e-26 120.9 113 56.6
Lalb_Chr09g0325821 Lupinus albus HOM05D007928 ORTHO05D009207 6.7e-26 120.9 120 57.5
Lalb_Chr16g0381521 Lupinus albus HOM05D007928 ORTHO05D009207 2.6e-25 119.0 120 57.5
Phvul.002G143700 Phaseolus vulgaris HOM05D007928 ORTHO05D009207 2.2e-24 115.9 95 63.2
Cfa006837 Carpinus fangiana HOM05D007928 ORTHO05D009207 2.7e-22 109.0 104 54.8
Haze_03925 Corylus avellana HOM05D007928 ORTHO05D009207 6.5e-21 104.4 91 57.1
COL.COLO4_11686 Corchorus olitorius HOM05D007928 ORTHO05D009207 2.7e-19 99.0 106 50.0
Duzib147G1143 Durio zibethinus HOM05D007928 ORTHO05D009207 8.0e-19 97.4 106 52.8
RcHm_v2.0_Chr2g0110091 Rosa chinensis HOM05D007928 ORTHO05D009207 1.8e-18 96.3 107 48.6
Thecc.01G084700 Theobroma cacao HOM05D007928 ORTHO05D009207 2.3e-18 95.9 106 50.0
Manes.12G121900 Manihot esculenta HOM05D007928 ORTHO05D009207 4.0e-18 95.1 94 51.1
Atru.chr3.1179 Acer truncatum HOM05D007928 ORTHO05D009207 2.6e-17 92.4 101 48.5
CiPaw.08G144700 Carya illinoinensis HOM05D007928 ORTHO05D009207 1.7e-16 89.7 85 55.3
Prupe.6G209000 Prunus persica HOM05D007928 ORTHO05D009207 1.7e-16 89.7 98 48.0
FAN26G1033 Fragaria x ananassa HOM05D007928 ORTHO05D009207 2.2e-16 89.4 112 45.5
arahy.Tifrunner.gnm1.ann1.WFP9WJ Arachis hypogaea HOM05D007928 ORTHO05D009207 6.3e-16 87.8 120 45.0
FvH4_1g19100 Fragaria vesca HOM05D007928 ORTHO05D009207 1.1e-15 87.0 113 44.2
FAN19G2807 Fragaria x ananassa HOM05D007928 ORTHO05D009207 1.1e-15 87.0 113 44.2
Gohir.A12G082800 Gossypium hirsutum HOM05D007928 ORTHO05D009207 1.1e-15 87.0 104 48.1
Gorai.008G088800 Gossypium raimondii HOM05D007928 ORTHO05D009207 1.1e-15 87.0 104 48.1
CiPaw.07G043300 Carya illinoinensis HOM05D007928 ORTHO05D009207 4.1e-15 85.1 85 51.8
Gorai.007G230900 Gossypium raimondii HOM05D007928 ORTHO05D009207 9.1e-15 84.0 111 42.3
Cpa.g.sc129.13 Carica papaya HOM05D007928 ORTHO05D009207 1.2e-14 83.6 108 45.4
FAN23G2934 Fragaria x ananassa HOM05D007928 ORTHO05D009207 1.6e-14 83.2 95 47.4
Gohir.D11G215100 Gossypium hirsutum HOM05D007928 ORTHO05D009207 2.0e-14 82.8 111 42.3
Gohir.A11G208300 Gossypium hirsutum HOM05D007928 ORTHO05D009207 2.7e-14 82.4 111 43.2
TAR628G0787 Trochodendron aralioides HOM05D007928 ORTHO05D009207 3.5e-14 82.0 78 50.0
Ciclev10026783m.g Citrus clementina HOM05D007928 ORTHO05D009207 5.9e-14 81.3 94 45.7
arahy.Tifrunner.gnm1.ann1.K7GD79 Arachis hypogaea HOM05D007928 ORTHO05D009207 1.3e-13 80.1 106 43.4
arahy.Tifrunner.gnm1.ann1.ZD5YIK Arachis hypogaea HOM05D007928 ORTHO05D009207 1.3e-13 80.1 106 43.4
CsaV3_6G044800 Cucumis sativus L. HOM05D007928 ORTHO05D009207 2.2e-13 79.3 100 41.0
GSVIVG01003863001 Vitis vinifera HOM05D007928 ORTHO05D009207 6.5e-13 77.8 90 41.1
Gorai.007G058100 Gossypium raimondii HOM05D007928 ORTHO05D009207 1.1e-12 77.0 94 45.7
ClCG01G018220 Citrullus lanatus HOM05D007928 ORTHO05D009207 1.9e-12 76.3 92 44.6
Gohir.A11G049900 Gossypium hirsutum HOM05D007928 ORTHO05D009207 9.4e-12 73.9 72 51.4
MBI16_g14338_MAGBIO Magnolia biondii HOM05D007928 ORTHO05D009207 2.1e-11 72.8 91 41.8
MBI16_g36545_MAGBIO Magnolia biondii HOM05D007928 ORTHO05D009207 2.1e-11 72.8 109 38.5
MELO3C007699.2 Cucumis melo HOM05D007928 ORTHO05D009207 4.7e-11 71.6 90 43.3
Nn5g29796 Nelumbo nucifera HOM05D007928 ORTHO05D009207 6.1e-11 71.2 95 41.1
Oeu030822.1 Olea europaea HOM05D007928 ORTHO05D009207 6.1e-11 71.2 83 51.8
Cc07_g07960 Coffea canephora HOM05D007928 ORTHO05D009207 8.0e-11 70.9 94 44.7
Actinidia16387 Actinidia chinensis HOM05D007928 ORTHO05D009207 1.0e-10 70.5 91 41.8
Migut.H00287 Erythranthe guttata HOM05D007928 ORTHO05D009207 2.3e-10 69.3 108 44.4
Oeu054747.1 Olea europaea HOM05D007928 ORTHO05D009207 2.3e-10 69.3 89 42.7
SGA_v2.0_scaffold149G36512 Striga asiatica HOM05D007928 ORTHO05D009207 2.3e-10 69.3 75 52.0
Nn1g05659 Nelumbo nucifera HOM05D007928 ORTHO05D009207 6.8e-10 67.8 81 40.7
Nitab4.5_0000036g0450 Nicotiana tabacum HOM05D007928 ORTHO05D009207 6.8e-10 67.8 86 44.2
Solyc02g063380.1 Solanum lycopersicum HOM05D007928 ORTHO05D009207 8.8e-10 67.4 97 41.2
Sopen02g014470 Solanum pennellii HOM05D007928 ORTHO05D009207 8.8e-10 67.4 97 40.2
CDE01G0331 Ceratophyllum demersum HOM05D007928 ORTHO05D009207 1.2e-09 67.0 83 42.2
Sed0026702 Sechium edule HOM05D007928 ORTHO05D009207 1.2e-09 67.0 96 41.7
PGSC0003DMG400010390 Solanum tuberosum HOM05D007928 ORTHO05D009207 1.2e-09 67.0 96 39.6
Dinv36974 Davidia involucrata HOM05D007928 ORTHO05D009207 1.5e-09 66.6 75 48.0
SalBow3G1764 Salvia bowleyana HOM05D007928 ORTHO05D009207 1.5e-09 66.6 78 50.0
SalBow3G2359 Salvia bowleyana HOM05D007928 ORTHO05D009207 1.5e-09 66.6 78 50.0
Sed0007366 Sechium edule HOM05D007928 ORTHO05D009207 3.4e-09 65.5 89 41.6
Rhsim08G0088100 Rhododendron simsii HOM05D007928 ORTHO05D009207 4.4e-09 65.1 90 42.2
MBI16_g07262_MAGBIO Magnolia biondii HOM05D007928 ORTHO05D009207 7.5e-09 64.3 98 40.8
Oeu050985.1 Olea europaea HOM05D007928 ORTHO05D009207 7.5e-09 64.3 83 48.2
Nitab4.5_0007512g0040 Nicotiana tabacum HOM05D007928 ORTHO05D009207 9.8e-09 63.9 79 45.6
Nitab4.5_0003051g0030 Nicotiana tabacum HOM05D007928 ORTHO05D009207 2.2e-08 62.8 73 42.5
Sc03g0000550 Simmondsia chinensis HOM05D007928 ORTHO05D009207 2.2e-08 62.8 92 38.0
Peaxi162Scf00703g00018 Petunia axillaris HOM05D007928 ORTHO05D009207 4.1e-07 58.5 92 37.0
Migut.L00450 Erythranthe guttata HOM05D007928 ORTHO05D009207 9.2e-07 57.4 102 41.2
PGSC0003DMG400030657 Solanum tuberosum HOM05D007928 ORTHO05D009207 9.2e-07 57.4 107 38.3
Sopen02g036180 Solanum pennellii HOM05D007928 ORTHO05D009207 1.2e-06 57.0 104 37.5
Lsat_1_v5_gn_3_81040 Lactuca sativa HOM05D007928 ORTHO05D009207 1.6e-06 56.6 94 43.6
Peaxi162Scf00943g00053 Petunia axillaris HOM05D007928 ORTHO05D009207 2.0e-06 56.2 100 39.0
Lsat_1_v5_gn_4_157120 Lactuca sativa HOM05D011897 ORTHO05D009207 5.9e-06 54.7 83 34.9


User provided reference genes

Program Settings