Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g030350 Medicago truncatula HOM05D008363 ORTHO05D010508 3.7e-67 258.1 130 100.0
Psat2g136320 Pisum sativum HOM05D008363 ORTHO05D010508 5.8e-28 127.9 143 51.7
Ca_06083_v3 Cicer arietinum L. HOM05D008363 ORTHO05D010508 5.2e-21 104.8 145 49.0
Glyma.09G204700 Glycine max HOM05D008363 ORTHO05D010508 1.2e-20 103.6 141 46.8
TAR633G2165 Trochodendron aralioides HOM05D008363 ORTHO05D010508 2.6e-12 75.9 131 39.7
Glyma.01G018200 Glycine max HOM05D008363 ORTHO05D010508 5.8e-12 74.7 63 65.1
MD16G1273800 Malus domestica HOM05D008363 ORTHO05D010508 1.9e-10 69.7 146 36.3
TWI60G0018 Tripterygium wilfordii HOM05D008363 ORTHO05D010508 2.4e-10 69.3 127 37.0
PGR042G3791 Punica granatum HOM05D008363 ORTHO05D010508 4.2e-10 68.6 128 35.2
TAR636G2722 Trochodendron aralioides HOM05D008363 ORTHO05D010508 9.3e-10 67.4 147 35.4
CsaV3_3G001670 Cucumis sativus L. HOM05D008363 ORTHO05D010508 1.2e-09 67.0 132 35.6
Prupe.5G035100 Prunus persica HOM05D008363 ORTHO05D010508 2.7e-09 65.9 126 36.5
MD06G1034800 Malus domestica HOM05D008363 ORTHO05D010508 3.5e-09 65.5 148 35.1
Aqoxy5G00023 Aquilegia oxysepala HOM05D008363 ORTHO05D010508 6.6e-08 61.2 129 34.1
PGR031G1477 Punica granatum HOM05D008363 ORTHO05D010508 8.7e-08 60.8 132 34.8
Cpa.g.sc227.8 Carica papaya HOM05D008363 ORTHO05D010508 1.9e-07 59.7 150 32.0
Manes.15G182300 Manihot esculenta HOM05D008363 ORTHO05D010508 2.5e-07 59.3 125 32.8
CANSAT21G1194 Cannabis sativa HOM05D008363 ORTHO05D010508 3.3e-07 58.9 141 32.6
RcHm_v2.0_Chr7g0209801 Rosa chinensis HOM05D008363 ORTHO05D010508 3.3e-07 58.9 145 31.0
Ciclev10013884m.g Citrus clementina HOM05D008363 ORTHO05D010508 4.3e-07 58.5 130 31.5
FAN04G2847 Fragaria x ananassa HOM05D008363 ORTHO05D010508 4.3e-07 58.5 145 32.4
FAN13G1991 Fragaria x ananassa HOM05D008363 ORTHO05D010508 5.6e-07 58.2 145 31.7
Thecc.03G227000 Theobroma cacao HOM05D008363 ORTHO05D010508 5.6e-07 58.2 134 33.6
FAN08G0799 Fragaria x ananassa HOM05D008363 ORTHO05D010508 9.6e-07 57.4 145 31.7
Duzib205G1194 Durio zibethinus HOM05D008363 ORTHO05D010508 1.3e-06 57.0 133 33.1
FvH4_5g22141 Fragaria vesca HOM05D008363 ORTHO05D010508 2.1e-06 56.2 126 33.3
FAN18G1001 Fragaria x ananassa HOM05D008363 ORTHO05D010508 2.1e-06 56.2 126 33.3
Gohir.D03G171900 Gossypium hirsutum HOM05D008363 ORTHO05D010508 6.2e-06 54.7 150 32.7


User provided reference genes

Program Settings