Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g030310 Medicago truncatula HOM05D009512 ORTHO05D010730 1.0e-58 229.9 121 100.0
Medtr5g430440 Medicago truncatula HOM05D009512 ORTHO05D010730 8.5e-58 226.9 121 99.2
TPR.G1037 Trifolium pratense HOM05D009512 ORTHO05D010730 2.3e-47 192.2 121 83.5
Medtr5g030290 Medicago truncatula HOM05D009512 ORTHO05D010730 2.5e-41 172.2 121 77.7
Medtr5g430430 Medicago truncatula HOM05D009512 ORTHO05D010730 2.5e-41 172.2 121 77.7
Psat2g136400 Pisum sativum HOM05D009512 ORTHO05D010730 4.7e-40 167.9 121 67.8
Ca_06084_v3 Cicer arietinum L. HOM05D009512 ORTHO05D010730 1.1e-36 156.8 121 69.4
Lj2g0024897 Lotus japonicus HOM05D009512 ORTHO05D010730 1.9e-25 119.4 112 59.8
Phvul.002G141000 Phaseolus vulgaris HOM05D009512 ORTHO05D010730 4.3e-25 118.2 125 47.2
Glyma.09G205000 Glycine max HOM05D009512 ORTHO05D010730 9.5e-25 117.1 128 51.6
arahy.Tifrunner.gnm1.ann1.JQZ01T Arachis hypogaea HOM05D009512 ORTHO05D010730 6.2e-24 114.4 122 55.7
arahy.Tifrunner.gnm1.ann1.KKPN0I Arachis hypogaea HOM05D009512 ORTHO05D010730 6.2e-24 114.4 122 55.7
Glyma.01G018000 Glycine max HOM05D009512 ORTHO05D010730 6.2e-24 114.4 127 48.8
MD12G1166300 Malus domestica HOM05D009512 ORTHO05D010730 1.6e-11 73.2 122 33.6
Sed0026474 Sechium edule HOM05D009512 ORTHO05D010730 3.3e-09 65.5 96 36.5
ClCG10G001530 Citrullus lanatus HOM05D009512 ORTHO05D010730 3.6e-08 62.0 80 41.2
AUR62003685 Chenopodium quinoa HOM05D011998 ORTHO05D010730 4.7e-08 61.6 99 38.4
QL12p005029 Quercus lobata HOM05D009512 ORTHO05D010730 4.7e-08 61.6 96 45.8
EL10Ac6g15177 Beta vulgaris HOM05D011998 ORTHO05D010730 3.1e-07 58.9 68 44.1
AUR62017997 Chenopodium quinoa HOM05D011998 ORTHO05D010730 3.1e-07 58.9 99 36.4
Ah.03g143310 Amaranthus hybridus HOM05D011998 ORTHO05D010730 6.8e-07 57.8 64 43.8
Prupe.5G034700 Prunus persica HOM05D009512 ORTHO05D010730 1.2e-06 57.0 41 51.2
Aqoxy1G03922 Aquilegia oxysepala HOM05D009512 ORTHO05D010730 2.0e-06 56.2 36 58.3
AUR62017995 Chenopodium quinoa HOM05D011998 ORTHO05D010730 2.6e-06 55.8 43 53.5
Nitab4.5_0000271g0320 Nicotiana tabacum HOM05D000379 ORTHO05D000254 4.4e-06 55.1 38 55.3


User provided reference genes

Program Settings