Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 5.7e-276 953.7 492 100.0
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 1.6e-241 839.3 495 88.1
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 5.6e-223 777.7 494 82.8
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 9.9e-204 713.8 498 76.7
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 1.7e-200 703.0 500 76.4
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 1.1e-199 700.3 500 76.6
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 3.3e-199 698.7 502 76.3
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 2.4e-197 692.6 499 74.3
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 4.4e-196 688.3 502 74.9
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 2.3e-192 676.0 501 74.3
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 2.3e-192 676.0 501 74.3
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 5.8e-188 661.4 393 86.3
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 5.9e-140 501.9 501 59.5
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 1.1e-138 497.7 502 60.0
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 2.1e-137 493.4 502 59.0
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 3.6e-137 492.7 503 58.1
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 8.8e-136 488.0 498 57.4
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 1.3e-134 484.2 495 57.6
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 3.7e-134 482.6 497 56.7
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 9.1e-133 478.0 502 58.2
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.6e-132 476.5 500 57.4
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 1.7e-131 473.8 500 57.0
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 2.9e-131 473.0 503 56.9
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 5.5e-130 468.8 500 56.2
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 9.4e-130 468.0 502 56.2
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 1.6e-129 467.2 495 56.0
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 6.1e-129 465.3 500 56.4
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 1.2e-127 461.1 508 56.9
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 2.0e-127 460.3 503 56.1
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 9.8e-127 458.0 501 55.3
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 3.7e-126 456.1 502 54.2
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 8.3e-126 454.9 503 55.9
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 2.0e-124 450.3 500 56.0
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.0e-124 450.3 560 51.1
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 4.5e-124 449.1 500 53.4
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 5.9e-124 448.7 498 55.4
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.0e-123 448.0 560 50.9
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.9e-122 443.7 561 50.8
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 5.5e-122 442.2 504 55.4
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 4.0e-120 436.0 524 52.1
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 2.6e-119 433.3 472 54.0
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 4.9e-118 429.1 499 53.9
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 8.3e-118 428.3 531 52.5
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 1.8e-117 427.2 560 49.5
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 4.1e-117 426.0 501 52.7
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 1.2e-116 424.5 510 52.2
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 1.0e-115 421.4 451 56.1
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 8.9e-112 408.3 576 46.5
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 4.4e-111 406.0 506 49.8
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 5.7e-111 405.6 506 49.8
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 1.8e-109 400.6 498 50.4
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 2.4e-109 400.2 493 50.7
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 9.2e-109 398.3 513 51.5
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 7.8e-108 395.2 496 51.0
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 1.0e-107 394.8 498 50.0
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 6.6e-107 392.1 500 50.2
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 6.6e-107 392.1 516 51.2
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 1.9e-106 390.6 507 49.9
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 4.4e-103 379.4 515 47.8
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 5.8e-103 379.0 438 54.3
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 1.3e-102 377.9 510 47.5
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 2.9e-102 376.7 499 50.3
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 1.1e-98 364.8 517 46.0
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 4.3e-98 362.8 360 58.3
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 1.2e-95 354.8 506 47.4
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 1.5e-95 354.4 432 51.6
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.5e-92 343.2 413 52.3
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 7.3e-90 335.5 443 48.3
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 8.4e-86 322.0 501 45.3
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 1.0e-83 315.1 504 43.1
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 2.3e-83 313.9 533 42.4
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 3.9e-83 313.2 474 48.3
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 2.1e-81 307.4 501 43.3
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 6.0e-76 289.3 376 50.5
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 3.9e-75 286.6 504 42.1
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 1.5e-74 284.6 510 41.8
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 4.8e-73 279.6 410 48.5
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 3.9e-67 260.0 425 44.7
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 1.1e-61 241.9 327 46.2
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 7.1e-61 239.2 260 55.0
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 1.1e-37 162.2 310 42.3
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 1.1e-37 162.2 310 39.4
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 8.8e-27 125.9 263 38.0
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 1.5e-26 125.2 282 36.9
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 4.8e-25 120.2 154 51.9
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 2.0e-23 114.8 79 79.7
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.1e-21 109.0 76 77.6
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.5e-21 108.6 159 41.5
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 4.2e-21 107.1 318 30.8
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 7.2e-21 106.3 68 85.3
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 8.0e-20 102.8 183 41.5
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 8.8e-19 99.4 53 96.2
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 1.2e-18 99.0 562 27.8
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 9.1e-16 89.4 54 75.9
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 1.6e-15 88.6 62 64.5
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 1.1e-13 82.4 62 59.7
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 4.2e-13 80.5 44 90.9
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 8.8e-11 72.8 40 87.5
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 7.5e-10 69.7 61 62.3
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 7.5e-10 69.7 61 62.3
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 1.3e-09 68.9 151 43.0
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 1.3e-06 58.9 53 56.6


User provided reference genes

Program Settings