Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g023540 Medicago truncatula HOM05D000192 ORTHO05D000123 4.9e-35 150.6 77 100.0
Phvul.002G113600 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 9.1e-13 76.6 69 58.0
Glyma.01G160800 Glycine max HOM05D000192 ORTHO05D000123 1.2e-12 76.3 69 58.0
Lj2g0008788 Lotus japonicus HOM05D000192 ORTHO05D000123 2.6e-12 75.1 69 59.4
Lj2g0007645 Lotus japonicus HOM05D000192 ORTHO05D000123 4.5e-12 74.3 67 61.2
Phvul.002G113400 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 4.5e-12 74.3 69 58.0
Glyma.11G083100 Glycine max HOM05D000192 ORTHO05D000123 5.9e-12 73.9 69 59.4
Glyma.01G160500 Glycine max HOM05D000192 ORTHO05D000123 7.7e-12 73.6 68 58.8
Glyma.11G083200 Glycine max HOM05D000192 ORTHO05D000123 1.3e-11 72.8 69 56.5
Phvul.002G113700 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 1.3e-11 72.8 69 56.5
Phvul.002G113300 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 1.7e-11 72.4 69 56.5
Glyma.01G160700 Glycine max HOM05D000192 ORTHO05D000123 2.2e-11 72.0 68 57.4
TPR.G25130 Trifolium pratense HOM05D000192 ORTHO05D000123 2.2e-11 72.0 71 57.7
Medtr5g023460 Medicago truncatula HOM05D000192 ORTHO05D000123 2.9e-11 71.6 67 58.2
Glyma.01G160900 Glycine max HOM05D000192 ORTHO05D000123 3.8e-11 71.2 70 55.7
VMungo1215G2216 Vigna mungo HOM05D000192 ORTHO05D000123 3.8e-11 71.2 68 55.9
Medtr5g023580 Medicago truncatula HOM05D000192 ORTHO05D000123 5.0e-11 70.9 70 55.7
TPR.G19243 Trifolium pratense HOM05D000192 ORTHO05D000123 5.0e-11 70.9 57 63.2
VMungo1215G1182 Vigna mungo HOM05D000192 ORTHO05D000123 6.5e-11 70.5 69 53.6
TPR.G25097 Trifolium pratense HOM05D000192 ORTHO05D000123 1.4e-10 69.3 68 57.4
TPR.G25102 Trifolium pratense HOM05D000192 ORTHO05D000123 1.4e-10 69.3 68 54.4
VMungo1215G0125 Vigna mungo HOM05D000192 ORTHO05D000123 2.5e-10 68.6 65 53.8
TPR.G25122 Trifolium pratense HOM05D000192 ORTHO05D000123 3.2e-10 68.2 68 54.4
Psat2g150800 Pisum sativum HOM05D000192 ORTHO05D000123 4.2e-10 67.8 69 55.1
TPR.G25143 Trifolium pratense HOM05D000192 ORTHO05D000123 4.2e-10 67.8 68 54.4
Lalb_Chr05g0212001 Lupinus albus HOM05D000192 ORTHO05D000123 5.5e-10 67.4 66 56.1
Medtr5g023320 Medicago truncatula HOM05D000192 ORTHO05D000123 7.2e-10 67.0 65 53.8
Glyma.11G083000 Glycine max HOM05D000192 ORTHO05D000123 9.4e-10 66.6 70 51.4
Medtr5g023370 Medicago truncatula HOM05D000192 ORTHO05D000123 9.4e-10 66.6 68 54.4
Lj2g0018274 Lotus japonicus HOM05D000192 ORTHO05D000123 1.2e-09 66.2 70 55.7
Medtr5g023340 Medicago truncatula HOM05D000192 ORTHO05D000123 1.2e-09 66.2 68 52.9
Medtr5g023390 Medicago truncatula HOM05D000192 ORTHO05D000123 1.2e-09 66.2 68 52.9
Medtr5g023350 Medicago truncatula HOM05D000192 ORTHO05D000123 1.6e-09 65.9 68 52.9
TPR.G28904 Trifolium pratense HOM05D000192 ORTHO05D000123 2.7e-09 65.1 65 55.4
VMungo0251G3742 Vigna mungo HOM05D000192 ORTHO05D000123 3.6e-09 64.7 70 52.9
Lalb_Chr05g0211981 Lupinus albus HOM05D000192 ORTHO05D000123 4.6e-09 64.3 69 56.5
Psat7g102560 Pisum sativum HOM05D000192 ORTHO05D000123 6.1e-09 63.9 74 48.6
VMungo1215G2151 Vigna mungo HOM05D000192 ORTHO05D000123 6.1e-09 63.9 69 47.8
Psat0s2508g0040 Pisum sativum HOM05D000192 ORTHO05D000123 1.0e-08 63.2 69 50.7
TWI09G0500 Tripterygium wilfordii HOM05D000192 ORTHO05D000123 1.4e-08 62.8 67 52.2
Medtr5g023520 Medicago truncatula HOM05D000192 ORTHO05D000123 1.8e-08 62.4 69 50.7
Medtr5g023600 Medicago truncatula HOM05D000192 ORTHO05D000123 1.8e-08 62.4 67 52.2
Lj2g0016809 Lotus japonicus HOM05D000192 ORTHO05D000123 2.3e-08 62.0 70 54.3
Psat7g102600 Pisum sativum HOM05D000192 ORTHO05D000123 2.3e-08 62.0 74 47.3
QL06p052508 Quercus lobata HOM05D000192 ORTHO05D000123 3.0e-08 61.6 66 50.0
Lalb_Chr05g0211991 Lupinus albus HOM05D000192 ORTHO05D000123 3.9e-08 61.2 69 53.6
TWI73G0614 Tripterygium wilfordii HOM05D000192 ORTHO05D000123 3.9e-08 61.2 67 52.2
Lj4g0008126 Lotus japonicus HOM05D000192 ORTHO05D000123 5.1e-08 60.8 70 50.0
Lalb_Chr09g0321351 Lupinus albus HOM05D000192 ORTHO05D000123 5.1e-08 60.8 65 55.4
Psat2g150760 Pisum sativum HOM05D000192 ORTHO05D000123 5.1e-08 60.8 69 56.5
Glyma.11G083401 Glycine max HOM05D000192 ORTHO05D000123 8.8e-08 60.1 49 67.3
Medtr8g074420 Medicago truncatula HOM05D000192 ORTHO05D000123 1.1e-07 59.7 69 47.8
Psat2g150560 Pisum sativum HOM05D000192 ORTHO05D000123 1.1e-07 59.7 69 53.6
Psat2g150680 Pisum sativum HOM05D000192 ORTHO05D000123 1.1e-07 59.7 69 53.6
Medtr5g023530 Medicago truncatula HOM05D000192 ORTHO05D000123 1.5e-07 59.3 65 50.8
DCAR_027626 Daucus carota HOM05D000192 ORTHO05D000123 2.6e-07 58.5 67 49.3
Lalb_Chr05g0211971 Lupinus albus HOM05D000192 ORTHO05D000123 2.6e-07 58.5 66 51.5
Lalb_Chr05g0212011 Lupinus albus HOM05D000192 ORTHO05D000123 2.6e-07 58.5 66 51.5
Prupe.7G178200 Prunus persica HOM05D000192 ORTHO05D000123 2.6e-07 58.5 68 48.5
TPR.G14978 Trifolium pratense HOM05D000192 ORTHO05D000123 2.6e-07 58.5 69 52.2
Medtr5g023550 Medicago truncatula HOM05D000192 ORTHO05D000123 3.3e-07 58.2 68 47.1
Lalb_Chr16g0391561 Lupinus albus HOM05D000192 ORTHO05D000123 4.4e-07 57.8 66 45.5
Medtr8g074510 Medicago truncatula HOM05D000192 ORTHO05D000123 4.4e-07 57.8 67 46.3
Medtr5g023470 Medicago truncatula HOM05D000192 ORTHO05D000123 5.7e-07 57.4 65 49.2
Phvul.003G268300 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 5.7e-07 57.4 76 48.7
Dinv40164 Davidia involucrata HOM05D000192 ORTHO05D000123 7.4e-07 57.0 67 46.3
TPR.G17448 Trifolium pratense HOM05D000192 ORTHO05D000123 7.4e-07 57.0 65 50.8
GSVIVG01007433001 Vitis vinifera HOM05D000192 ORTHO05D000123 7.4e-07 57.0 71 45.1
arahy.Tifrunner.gnm1.ann1.3KF6VB Arachis hypogaea HOM05D000192 ORTHO05D000123 9.7e-07 56.6 65 52.3
arahy.Tifrunner.gnm1.ann1.A8GCEE Arachis hypogaea HOM05D000192 ORTHO05D000123 9.7e-07 56.6 65 52.3
Glyma.02G042700 Glycine max HOM05D000192 ORTHO05D000123 9.7e-07 56.6 69 44.9
Lalb_Chr05g0229751 Lupinus albus HOM05D000192 ORTHO05D000123 1.3e-06 56.2 61 47.5
Lj2C489T15 Lonicera japonica HOM05D000192 ORTHO05D000123 1.7e-06 55.8 68 45.6
Medtr8g074450 Medicago truncatula HOM05D000192 ORTHO05D000123 1.7e-06 55.8 67 46.3
Duzib147G0483 Durio zibethinus HOM05D000192 ORTHO05D000123 2.2e-06 55.5 70 47.1
VMungo0251G0348 Vigna mungo HOM05D000192 ORTHO05D000123 2.2e-06 55.5 75 48.0
Cfa007048 Carpinus fangiana HOM05D000192 ORTHO05D000123 2.8e-06 55.1 69 49.3
arahy.Tifrunner.gnm1.ann1.4YX886 Arachis hypogaea HOM05D000192 ORTHO05D000123 3.7e-06 54.7 64 53.1
arahy.Tifrunner.gnm1.ann1.6UEV59 Arachis hypogaea HOM05D000192 ORTHO05D000123 3.7e-06 54.7 64 53.1
Lalb_Chr25g0282301 Lupinus albus HOM05D000192 ORTHO05D000123 3.7e-06 54.7 69 49.3
MD15G1234800 Malus domestica HOM05D000192 ORTHO05D000123 3.7e-06 54.7 64 48.4
Lalb_Chr19g0128981 Lupinus albus HOM05D000192 ORTHO05D000123 4.8e-06 54.3 69 49.3
TPR.G14985 Trifolium pratense HOM05D000192 ORTHO05D000123 4.8e-06 54.3 52 53.8
TAR376G1126 Trochodendron aralioides HOM05D000192 ORTHO05D000123 4.8e-06 54.3 70 38.6
Lj2C489T10 Lonicera japonica HOM05D000192 ORTHO05D000123 6.3e-06 53.9 68 45.6
Lj2C490T3 Lonicera japonica HOM05D000192 ORTHO05D000123 6.3e-06 53.9 67 46.3
GSVIVG01002748001 Vitis vinifera HOM05D000192 ORTHO05D000123 6.3e-06 53.9 68 42.6
GSVIVG01007245001 Vitis vinifera HOM05D000192 ORTHO05D000123 6.3e-06 53.9 68 42.6
Sabra05G0085700 Salix brachista HOM05D000192 ORTHO05D000123 8.2e-06 53.5 70 48.6


User provided reference genes

Program Settings