Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g023310 Medicago truncatula HOM05D000045 ORTHO05D000067 1.8e-62 242.3 109 100.0
TPR.G14927 Trifolium pratense HOM05D000045 ORTHO05D000067 4.4e-21 104.8 157 38.2
TPR.G32734 Trifolium pratense HOM05D000045 ORTHO05D000067 4.9e-20 101.3 157 37.6
TPR.G21972 Trifolium pratense HOM05D000045 ORTHO05D000067 1.4e-19 99.8 157 38.2
TPR.G36472 Trifolium pratense HOM05D000045 ORTHO05D000067 8.0e-15 84.0 161 34.8
Prupe.2G013600 Prunus persica HOM05D000045 ORTHO05D000067 6.8e-14 80.9 135 34.8
TAR035G0002 Trochodendron aralioides HOM05D000045 ORTHO05D000067 1.2e-13 80.1 156 32.1
TWI12G1008 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.5e-13 79.7 117 39.3
CiPaw.04G006000 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.6e-13 79.0 146 32.9
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.4e-13 78.6 156 31.4
FvH4_2g24401 Fragaria vesca HOM05D000045 ORTHO05D000067 4.4e-13 78.2 121 38.0
CiPaw.01G219800 Carya illinoinensis HOM05D000045 ORTHO05D000067 9.8e-13 77.0 157 31.2
CiPaw.08G134300 Carya illinoinensis HOM05D000045 ORTHO05D000067 9.8e-13 77.0 157 29.9
CiPaw.01G071100 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.3e-12 76.6 157 31.2
CiPaw.16G049800 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.7e-12 76.3 157 31.8
Lj7C67T4 Lonicera japonica HOM05D000045 ORTHO05D000067 1.7e-12 76.3 156 31.4
Prupe.4G256500 Prunus persica HOM05D000045 ORTHO05D000067 1.7e-12 76.3 153 31.4
TAR371G0903 Trochodendron aralioides HOM05D000045 ORTHO05D000067 2.2e-12 75.9 156 30.8
CiPaw.10G080500 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.9e-12 75.5 157 29.3
Atru.chr11.228 Acer truncatum HOM05D000045 ORTHO05D000067 4.9e-12 74.7 157 30.6
CiPaw.03G259700 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.9e-12 74.7 157 30.6
CSS0025960 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.4e-12 74.3 138 32.6
CiPaw.10G145800 Carya illinoinensis HOM05D000045 ORTHO05D000067 6.4e-12 74.3 157 30.6
CiPaw.01G228200 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.3e-12 73.9 157 29.9
CiPaw.07G176900 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.3e-12 73.9 157 29.9
Prupe.8G014900 Prunus persica HOM05D000045 ORTHO05D000067 1.1e-11 73.6 157 31.2
Atru.chr8.388 Acer truncatum HOM05D000045 ORTHO05D000067 1.4e-11 73.2 157 29.9
Aqoxy7G02166 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.4e-11 73.2 156 33.3
CiPaw.01G072300 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.4e-11 73.2 157 30.6
CiPaw.15G043900 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.4e-11 73.2 134 34.3
CiPaw.06G017700 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.9e-11 72.8 157 29.9
CiPaw.11G070100 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.4e-11 72.4 145 32.4
ECA238G2966 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.4e-11 72.4 155 29.7
CiPaw.15G141000 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.2e-11 72.0 158 29.7
CiPaw.15G163100 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.2e-11 72.0 157 29.9
CSS0045445 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.1e-11 71.6 156 30.1
CiPaw.02G091900 Carya illinoinensis HOM05D000045 ORTHO05D000067 5.4e-11 71.2 157 29.9
CiPaw.15G062800 Carya illinoinensis HOM05D000045 ORTHO05D000067 7.0e-11 70.9 157 29.9
Os11g0681300 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 7.0e-11 70.9 156 28.2
TWI09G0930 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.0e-11 70.9 156 31.4
CSS0003188 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.2e-11 70.5 156 29.5
CSS0011877 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.2e-11 70.5 156 29.5
CSS0029137 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.2e-11 70.5 156 29.5
CSS0031906 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.2e-11 70.5 156 29.5
CSS0038307 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.2e-11 70.5 157 28.0
CiPaw.03G222600 Carya illinoinensis HOM05D000045 ORTHO05D000067 9.2e-11 70.5 157 29.9
ECA240G0947 Erigeron canadensis HOM05D000045 ORTHO05D000067 9.2e-11 70.5 155 29.7
PSO017G6224 Papaver somniferum HOM05D000045 ORTHO05D000067 9.2e-11 70.5 150 32.0
CSS0044669 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-10 70.1 156 29.5
CiPaw.05G024400 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.0e-10 69.3 157 28.0
CiPaw.13G125900 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.0e-10 69.3 113 35.4
ECA234G4538 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.0e-10 69.3 156 26.9
CSS0013592 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.7e-10 68.9 138 31.9
CiPaw.01G139200 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.7e-10 68.9 155 28.4
CiPaw.05G188500 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.7e-10 68.9 157 29.3
CiPaw.06G047200 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.7e-10 68.9 157 29.9
CSS0042980 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.5e-10 68.6 156 29.5
CiPaw.16G119700 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.5e-10 68.6 157 28.7
COL.COLO4_12305 Corchorus olitorius HOM05D000045 ORTHO05D000067 3.5e-10 68.6 90 40.0
ECA238G0146 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.5e-10 68.6 155 29.7
ECA240G2379 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.5e-10 68.6 155 29.7
CSS0002504 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.8e-10 67.4 156 28.8
CSS0007725 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.8e-10 67.4 156 28.2
CSS0010592 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.8e-10 67.4 156 28.8
CSS0014852 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.8e-10 67.4 156 28.8
CSS0021605 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.8e-10 67.4 156 28.8
CSS0049497 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.8e-10 67.4 171 27.5
CiPaw.04G062400 Carya illinoinensis HOM05D000045 ORTHO05D000067 7.8e-10 67.4 134 30.6
Ca_08878_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000067 7.8e-10 67.4 130 32.3
TPR.G40309 Trifolium pratense HOM05D000045 ORTHO05D000067 7.8e-10 67.4 96 42.7
CSS0022608 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.0e-09 67.0 156 28.2
CSS0021811 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.3e-09 66.6 156 28.2
CSS0041042 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.3e-09 66.6 156 28.2
Lj2g0018924 Lotus japonicus HOM05D000045 ORTHO05D000067 1.7e-09 66.2 80 42.5
TWI38G2084 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.7e-09 66.2 144 29.9
CSS0038133 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.3e-09 65.9 155 29.0
CSS0012477 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.0e-09 65.5 156 27.6
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.0e-09 65.5 172 27.9
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 3.0e-09 65.5 157 28.0
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 3.0e-09 65.5 157 28.0
CSS0010009 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.0e-09 64.7 156 28.8
CSS0018417 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.0e-09 64.7 156 28.8
CSS0030058 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.0e-09 64.7 81 38.3
CSS0048636 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.0e-09 64.7 156 28.8
ECA234G4595 Erigeron canadensis HOM05D000045 ORTHO05D000067 5.0e-09 64.7 155 28.4
CSS0028932 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.6e-09 64.3 160 27.5
COL.COLO4_27566 Corchorus olitorius HOM05D000045 ORTHO05D000067 6.6e-09 64.3 150 29.3
TPR.G38495 Trifolium pratense HOM05D000045 ORTHO05D000067 6.6e-09 64.3 79 44.3
CSS0031250 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.1e-08 63.5 156 28.8
CSS0033027 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.1e-08 63.5 156 27.6
CSS0014163 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.5e-08 63.2 156 28.2
CiPaw.07G200600 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.5e-08 63.2 80 42.5
TWI14G0305 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.5e-08 63.2 80 41.2
TWI31G0500 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.9e-08 62.8 172 29.1
TWI79G1737 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.9e-08 62.8 130 30.0
TWI81G0958 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.9e-08 62.8 172 29.1
CSS0024404 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-08 62.4 156 27.6
TWI79G0782 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.5e-08 62.4 153 30.1
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.3e-08 62.0 153 28.8
TWI23G1327 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.3e-08 62.0 153 28.8
CiPaw.07G027200 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.3e-08 61.6 80 40.0
PSO170G5073 Papaver somniferum HOM05D000045 ORTHO05D000067 4.3e-08 61.6 150 30.0
CSS0028315 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.6e-08 61.2 143 28.7
TWI09G1457 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.6e-08 61.2 153 30.1
TWI63G1556 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.6e-08 61.2 117 33.3
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.3e-08 60.8 80 38.8
PSO063G5377 Papaver somniferum HOM05D000045 ORTHO05D000067 7.3e-08 60.8 80 36.2
QL02p026731 Quercus lobata HOM05D000045 ORTHO05D000067 7.3e-08 60.8 150 27.3
QL93p2012_0049 Quercus lobata HOM05D000045 ORTHO05D000067 7.3e-08 60.8 150 27.3
PSO675G3853 Papaver somniferum HOM05D000045 ORTHO05D000067 9.5e-08 60.5 80 41.2
TPR.G27944 Trifolium pratense HOM05D000045 ORTHO05D000067 9.5e-08 60.5 154 27.3
TWI60G1550 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.5e-08 60.5 153 28.8
PSO017G2907 Papaver somniferum HOM05D000045 ORTHO05D000067 1.2e-07 60.1 80 37.5
PSO210G6153 Papaver somniferum HOM05D000045 ORTHO05D000067 1.2e-07 60.1 80 36.2
TWI34G0144 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-07 60.1 153 30.1
TWI60G1535 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-07 60.1 153 29.4
TWI81G0019 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-07 60.1 80 40.0
PSO339G4192 Papaver somniferum HOM05D000045 ORTHO05D000067 1.6e-07 59.7 80 36.2
TWI12G1108 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.6e-07 59.7 72 43.1
TWI81G0182 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.6e-07 59.7 80 41.2
PSO528G0040 Papaver somniferum HOM05D000045 ORTHO05D000067 2.1e-07 59.3 80 36.2
TWI73G0003 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.1e-07 59.3 141 28.4
TPR.G4145 Trifolium pratense HOM05D000045 ORTHO05D000067 2.8e-07 58.9 79 40.5
PSO017G1702 Papaver somniferum HOM05D000045 ORTHO05D000067 3.6e-07 58.5 82 35.4
PSO063G4984 Papaver somniferum HOM05D000045 ORTHO05D000067 3.6e-07 58.5 154 27.9
CSS0038184 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.7e-07 58.2 80 37.5
CiPaw.16G024000 Carya illinoinensis HOM05D000045 ORTHO05D000067 6.2e-07 57.8 114 32.5
TWI56G0267 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.2e-07 57.8 80 38.8
TWI60G1422 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.2e-07 57.8 80 38.8
TAR624G1384 Trochodendron aralioides HOM05D000045 ORTHO05D000067 6.2e-07 57.8 154 25.3
CSS0031467 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.0e-07 57.4 117 30.8
CiPaw.09G196800 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.1e-06 57.0 80 37.5
CiPaw.13G117300 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.1e-06 57.0 80 37.5
PSO675G4083 Papaver somniferum HOM05D000045 ORTHO05D000067 1.1e-06 57.0 80 36.2
TWI39G0068 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-06 57.0 80 40.0
TWI39G0460 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-06 57.0 80 40.0
CiPaw.01G259100 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.4e-06 56.6 80 37.5
TWI31G0318 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.8e-06 56.2 78 38.5
TWI56G1189 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.8e-06 56.2 145 28.3
TWI77G0811 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.8e-06 56.2 83 36.1
ECA236G2762 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.3e-06 55.8 155 26.5
Atru.chr1.1264 Acer truncatum HOM05D000045 ORTHO05D000067 3.1e-06 55.5 80 38.8
PSO407G0414 Papaver somniferum HOM05D000045 ORTHO05D000067 3.1e-06 55.5 153 26.8
PSO675G1020 Papaver somniferum HOM05D000045 ORTHO05D000067 3.1e-06 55.5 160 24.4
CiPaw.05G005200 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.0e-06 55.1 80 36.2
ECA233G5204 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.0e-06 55.1 79 35.4
TWI15G0461 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.0e-06 55.1 80 38.8
CANSAT56G2885 Cannabis sativa HOM05D000045 ORTHO05D000067 5.2e-06 54.7 144 27.8
Ca_20299_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000067 5.2e-06 54.7 79 36.7
FvH4_4g07801 Fragaria vesca HOM05D000045 ORTHO05D000067 5.2e-06 54.7 80 36.2
PSO017G0532 Papaver somniferum HOM05D000045 ORTHO05D000067 5.2e-06 54.7 80 35.0
PSO384G4836 Papaver somniferum HOM05D000045 ORTHO05D000067 5.2e-06 54.7 79 36.7
PSO478G0574 Papaver somniferum HOM05D000045 ORTHO05D000067 5.2e-06 54.7 79 36.7
PSO832G1352 Papaver somniferum HOM05D000045 ORTHO05D000067 5.2e-06 54.7 79 36.7
FvH4_4g15802 Fragaria vesca HOM05D000045 ORTHO05D000067 6.8e-06 54.3 117 32.5
RhsimUnG0033900 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.8e-06 54.3 81 37.0
TPR.G24936 Trifolium pratense HOM05D000045 ORTHO05D000067 6.8e-06 54.3 79 36.7
CiPaw.15G125700 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.9e-06 53.9 131 31.3
PSO063G2828 Papaver somniferum HOM05D000045 ORTHO05D000067 8.9e-06 53.9 80 35.0
TWI12G1011 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.9e-06 53.9 78 37.2


User provided reference genes

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