Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 7.8e-89 330.5 172 100.0
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 3.6e-70 268.5 181 81.2
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 1.3e-59 233.4 152 77.6
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 6.2e-54 214.5 150 74.0
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 1.8e-53 213.0 182 67.6
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 9.9e-52 207.2 173 69.4
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 5.4e-50 201.4 185 63.8
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 2.7e-49 199.1 172 62.8
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 1.6e-46 189.9 185 61.1
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 3.7e-46 188.7 177 63.3
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 6.9e-45 184.5 177 62.1
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 5.5e-42 174.9 151 64.9
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 7.1e-42 174.5 178 57.9
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 1.2e-41 173.7 172 56.4
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 1.2e-41 173.7 91 89.0
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 1.0e-40 170.6 163 62.0
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 3.0e-40 169.1 151 60.3
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 3.9e-40 168.7 150 60.7
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 1.9e-39 166.4 151 61.6
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 1.3e-38 163.7 152 59.9
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 2.8e-38 162.5 147 57.1
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 4.8e-38 161.8 150 60.0
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 1.1e-37 160.6 177 55.9
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 2.4e-37 159.5 153 59.5
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 4.0e-37 158.7 159 54.7
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 9.0e-37 157.5 180 54.4
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 1.2e-36 157.1 175 55.4
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 1.2e-36 157.1 175 55.4
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 1.5e-36 156.8 147 57.1
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.5e-36 156.8 147 57.1
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 1.5e-36 156.8 176 52.3
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 2.0e-36 156.4 147 57.1
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 3.4e-36 155.6 152 56.6
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 7.6e-36 154.5 147 56.5
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 3.8e-35 152.1 138 60.1
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 1.1e-34 150.6 174 51.7
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 1.4e-34 150.2 172 52.3
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 9.3e-34 147.5 137 59.9
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 4.6e-33 145.2 141 56.7
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 4.6e-33 145.2 141 56.7
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 1.3e-32 143.7 160 51.9
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 1.8e-32 143.3 154 54.5
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 1.8e-32 143.3 152 55.3
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 3.0e-32 142.5 183 50.8
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 4.3e-31 138.7 183 50.3
TPR.G25136 Trifolium pratense HOM05D000373 ORTHO05D001763 4.3e-31 138.7 154 59.1
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 5.7e-31 138.3 143 57.3
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 9.7e-31 137.5 155 54.2
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 1.6e-30 136.7 139 52.5
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 4.8e-30 135.2 133 57.1
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 8.2e-30 134.4 140 55.0
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 1.8e-29 133.3 129 54.3
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 1.8e-29 133.3 145 53.1
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 4.1e-29 132.1 125 55.2
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 1.5e-28 130.2 100 67.0
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 1.5e-28 130.2 100 67.0
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 2.6e-28 129.4 147 51.0
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 3.4e-28 129.0 120 55.0
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 4.5e-28 128.6 146 51.4
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 5.9e-28 128.3 164 50.0
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 1.0e-27 127.5 140 52.1
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 1.7e-27 126.7 140 51.4
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 1.7e-27 126.7 147 51.0
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 3.8e-27 125.6 140 50.0
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 6.5e-27 124.8 140 52.1
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 8.5e-27 124.4 149 50.3
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 8.5e-27 124.4 140 51.4
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 1.1e-26 124.0 148 48.6
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 1.1e-26 124.0 152 48.7
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 1.1e-26 124.0 179 49.2
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 1.9e-26 123.2 140 50.7
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 1.9e-26 123.2 138 47.8
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 1.9e-26 123.2 179 48.0
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 2.5e-26 122.9 138 51.4
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 2.5e-26 122.9 140 51.4
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 2.5e-26 122.9 140 51.4
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 2.5e-26 122.9 140 51.4
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 7.2e-26 121.3 138 47.1
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 7.2e-26 121.3 155 45.2
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 7.2e-26 121.3 142 50.0
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 9.3e-26 120.9 140 50.7
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 9.3e-26 120.9 140 50.7
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 1.6e-25 120.2 124 58.9
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 3.6e-25 119.0 117 55.6
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 6.1e-25 118.2 129 51.2
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 1.8e-24 116.7 132 49.2
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 1.1e-23 114.0 123 51.2
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 3.3e-23 112.5 131 49.6
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 1.3e-22 110.5 109 55.0
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 2.2e-22 109.8 108 54.6
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 2.8e-22 109.4 152 46.7
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 8.2e-22 107.8 105 56.2
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 1.7e-19 100.1 98 56.1
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 2.9e-19 99.4 119 44.5
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 2.6e-15 86.3 103 46.6
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 1.4e-13 80.5 102 46.1
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 1.8e-13 80.1 85 55.3
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 2.2e-11 73.2 63 61.9
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 8.5e-11 71.2 96 46.9
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 4.2e-10 68.9 59 59.3
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 4.7e-09 65.5 94 40.4
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 8.0e-09 64.7 67 56.7
ATR0346G001 Amborella trichopoda HOM05D003374 ORTHO05D009470 1.0e-08 64.3 49 61.2


User provided reference genes

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