Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g022330 Medicago truncatula HOM05D000825 ORTHO05D264371 3.8e-38 161.0 81 100.0
Medtr1g068955 Medicago truncatula HOM05D000825 ORTHO05D002486 9.2e-16 86.7 112 50.9
Ca_04493_v3 Cicer arietinum L. HOM05D000825 ORTHO05D002486 9.5e-13 76.6 111 45.9
Lalb_Chr14g0364441 Lupinus albus HOM05D000825 ORTHO05D002486 3.4e-10 68.2 112 40.2
arahy.Tifrunner.gnm1.ann1.5PC8HY Arachis hypogaea HOM05D000825 ORTHO05D002486 6.4e-09 63.9 112 37.5
arahy.Tifrunner.gnm1.ann1.S8KTUY Arachis hypogaea HOM05D000825 ORTHO05D002486 6.4e-09 63.9 112 37.5
Psat0s2968g0080 Pisum sativum HOM05D000825 ORTHO05D002486 6.4e-09 63.9 110 39.1
Dinv37009 Davidia involucrata HOM05D000825 ORTHO05D002486 8.3e-09 63.5 112 36.6
Phvul.001G109700 Phaseolus vulgaris HOM05D000825 ORTHO05D002486 8.3e-09 63.5 73 49.3
Eucgr.K01489 Eucalyptus grandis HOM05D000825 ORTHO05D002486 1.1e-08 63.2 112 36.6
Thecc.05G293300 Theobroma cacao HOM05D000825 ORTHO05D002486 1.1e-08 63.2 112 36.6
Atru.chr2.1326 Acer truncatum HOM05D000825 ORTHO05D002486 1.4e-08 62.8 112 38.4
Atru.chr2.1328 Acer truncatum HOM05D000825 ORTHO05D002486 1.4e-08 62.8 112 38.4
CANSAT78G1525 Cannabis sativa HOM05D000825 ORTHO05D002486 1.9e-08 62.4 73 47.9
Lj1g0005192 Lotus japonicus HOM05D000825 ORTHO05D002486 1.9e-08 62.4 112 34.8
Atru.chr2.1329_Atru.chr2.1330 Acer truncatum HOM05D000825 ORTHO05D002486 2.4e-08 62.0 112 36.6
Duzib128G1900 Durio zibethinus HOM05D000825 ORTHO05D002486 2.4e-08 62.0 112 36.6
Glyma.16G042000 Glycine max HOM05D000825 ORTHO05D002486 2.4e-08 62.0 110 38.2
HanXRQChr13g0398061 Helianthus annuus HOM05D000825 ORTHO05D002486 2.4e-08 62.0 73 46.6
Lalb_Chr22g0359281 Lupinus albus HOM05D000825 ORTHO05D002486 2.4e-08 62.0 110 38.2
Zm00001eb300950 Zea mays HOM05D000825 ORTHO05D002486 2.4e-08 62.0 73 47.9
Cc06_g22850 Coffea canephora HOM05D000825 ORTHO05D002486 3.2e-08 61.6 112 35.7
arahy.Tifrunner.gnm1.ann1.VLF0GV Arachis hypogaea HOM05D000825 ORTHO05D002486 5.4e-08 60.8 73 43.8
CANSAT78G1851 Cannabis sativa HOM05D000825 ORTHO05D002486 5.4e-08 60.8 73 47.9
TWI60G0180 Tripterygium wilfordii HOM05D000825 ORTHO05D002486 5.4e-08 60.8 73 45.2
VMungo1383G3286 Vigna mungo HOM05D000825 ORTHO05D002486 5.4e-08 60.8 73 47.9
arahy.Tifrunner.gnm1.ann1.7KI1S0 Arachis hypogaea HOM05D000825 ORTHO05D002486 7.1e-08 60.5 112 33.9
arahy.Tifrunner.gnm1.ann1.Y46Q6K Arachis hypogaea HOM05D000825 ORTHO05D002486 7.1e-08 60.5 112 33.9
Ciclev10024548m.g Citrus clementina HOM05D000825 ORTHO05D002486 7.1e-08 60.5 112 34.8
COL.COLO4_13614 Corchorus olitorius HOM05D000825 ORTHO05D002486 7.1e-08 60.5 73 45.2
Gohir.D11G268400 Gossypium hirsutum HOM05D000825 ORTHO05D002486 7.1e-08 60.5 110 36.4
Gorai.007G288200 Gossypium raimondii HOM05D000825 ORTHO05D002486 7.1e-08 60.5 110 36.4
Gohir.A11G258400 Gossypium hirsutum HOM05D000825 ORTHO05D002486 9.2e-08 60.1 110 35.5
Sc25g0004970 Simmondsia chinensis HOM05D000825 ORTHO05D002486 9.2e-08 60.1 112 35.7
Duzib128G0256 Durio zibethinus HOM05D000825 ORTHO05D002486 1.2e-07 59.7 73 46.6
Duzib128G0749 Durio zibethinus HOM05D000825 ORTHO05D002486 1.2e-07 59.7 73 46.6
Eucgr.K01487 Eucalyptus grandis HOM05D000825 ORTHO05D002486 1.2e-07 59.7 73 43.8
Nn2g15882 Nelumbo nucifera HOM05D000825 ORTHO05D002486 1.2e-07 59.7 112 35.7
arahy.Tifrunner.gnm1.ann1.YI114N Arachis hypogaea HOM05D000825 ORTHO05D002486 1.6e-07 59.3 73 42.5
BraA01t04544Z Brassica rapa HOM05D000825 ORTHO05D002486 1.6e-07 59.3 73 45.2
Lj2A357T93 Lonicera japonica HOM05D000825 ORTHO05D002486 1.6e-07 59.3 110 36.4
MSTRG.26072 Avicennia marina HOM05D000825 ORTHO05D002486 2.1e-07 58.9 112 33.9
BcaB06g26205 Brassica carinata HOM05D000825 ORTHO05D002486 2.1e-07 58.9 73 45.2
A01p41130 Brassica napus HOM05D000825 ORTHO05D002486 2.1e-07 58.9 73 45.2
A01p41180 Brassica napus HOM05D000825 ORTHO05D002486 2.1e-07 58.9 73 45.2
BNapus_Darmor_BZH_scaffold_78p00530 Brassica napus HOM05D000825 ORTHO05D002486 2.1e-07 58.9 73 45.2
BNapus_Darmor_BZH_scaffold_78p00580 Brassica napus HOM05D000825 ORTHO05D002486 2.1e-07 58.9 73 45.2
CAN.G628.44 Capsicum annuum HOM05D000825 ORTHO05D002486 2.1e-07 58.9 112 35.7
ECA233G2301 Erigeron canadensis HOM05D000825 ORTHO05D002486 2.1e-07 58.9 73 42.5
Sabra19G0041500 Salix brachista HOM05D000825 ORTHO05D002486 2.1e-07 58.9 79 45.6
CDE10G0767 Ceratophyllum demersum HOM05D000001 ORTHO05D000003 2.7e-07 58.5 112 35.7
QL07p020172 Quercus lobata HOM05D000825 ORTHO05D002486 2.7e-07 58.5 110 36.4
PSO063G2104 Papaver somniferum HOM05D000825 ORTHO05D002486 3.5e-07 58.2 76 43.4
TPR.G32804 Trifolium pratense HOM05D000825 ORTHO05D002486 3.5e-07 58.2 111 35.1
unitig_746.g26798 Utricularia gibba HOM05D000825 ORTHO05D002486 3.5e-07 58.2 73 47.9
GSVIVG01033387001 Vitis vinifera HOM05D000825 ORTHO05D002486 3.5e-07 58.2 73 43.8
Ciclev10023854m.g Citrus clementina HOM05D000825 ORTHO05D002486 4.6e-07 57.8 83 39.8
Medtr7g094510 Medicago truncatula HOM05D000825 ORTHO05D002486 4.6e-07 57.8 112 36.6
AUR62032072 Chenopodium quinoa HOM05D000825 ORTHO05D002486 6.0e-07 57.4 73 43.8
Hma1.2p1_0860F.1_g229510 Hydrangea macrophylla HOM05D000825 ORTHO05D002486 6.0e-07 57.4 112 33.9
Hma1.2p1_3767F.1_g337530 Hydrangea macrophylla HOM05D000825 ORTHO05D002486 6.0e-07 57.4 112 33.9
Cc06_g22860 Coffea canephora HOM05D000825 ORTHO05D002486 7.8e-07 57.0 112 33.9
Nn2g14900 Nelumbo nucifera HOM05D000326 ORTHO05D002486 7.8e-07 57.0 110 34.5
Potri.019G033500 Populus trichocarpa HOM05D000825 ORTHO05D002486 7.8e-07 57.0 79 43.0
TWI34G1055 Tripterygium wilfordii HOM05D000825 ORTHO05D002486 7.8e-07 57.0 110 35.5
HanXRQChr02g0054131 Helianthus annuus HOM05D000825 ORTHO05D002486 1.0e-06 56.6 73 41.1
Nitab4.5_0000615g0040 Nicotiana tabacum HOM05D000825 ORTHO05D002486 1.0e-06 56.6 112 33.9
PGR142G2447 Punica granatum HOM05D000825 ORTHO05D002486 1.0e-06 56.6 74 40.5
THA.LOC104827269 Tarenaya hassleriana HOM05D000825 ORTHO05D002486 1.0e-06 56.6 73 41.1
EL10Ac3g06810 Beta vulgaris HOM05D000825 ORTHO05D002486 1.3e-06 56.2 112 33.0
AUR62032675 Chenopodium quinoa HOM05D000825 ORTHO05D002486 1.3e-06 56.2 73 42.5
Lsat_1_v5_gn_6_36801 Lactuca sativa HOM05D000825 ORTHO05D002486 1.3e-06 56.2 73 41.1
Potri.013G059100 Populus trichocarpa HOM05D000825 ORTHO05D002486 1.3e-06 56.2 73 43.8
SalBow1G2359 Salvia bowleyana HOM05D000825 ORTHO05D002486 1.3e-06 56.2 73 42.5
Sopen06g027370 Solanum pennellii HOM05D000825 ORTHO05D002486 1.3e-06 56.2 73 43.8
TAR633G0342 Trochodendron aralioides HOM05D000825 ORTHO05D002486 1.3e-06 56.2 73 42.5
Ca_08565_v3 Cicer arietinum L. HOM05D000825 ORTHO05D002486 1.7e-06 55.8 73 42.5
Lsat_1_v5_gn_6_36821 Lactuca sativa HOM05D000825 ORTHO05D002486 1.7e-06 55.8 73 41.1
Manes.09G142200 Manihot esculenta HOM05D000825 ORTHO05D002486 1.7e-06 55.8 112 34.8
PSO017G6123 Papaver somniferum HOM05D000825 ORTHO05D002486 1.7e-06 55.8 76 42.1
Eucgr.K01488 Eucalyptus grandis HOM05D000825 ORTHO05D002486 2.3e-06 55.5 73 42.5
CANSAT78G0766 Cannabis sativa HOM05D000825 ORTHO05D002486 3.0e-06 55.1 73 42.5
CARHR078120 Cardamine hirsuta HOM05D000825 ORTHO05D002486 3.0e-06 55.1 73 42.5
Cc00_g30330 Coffea canephora HOM05D000825 ORTHO05D002486 3.0e-06 55.1 112 33.0
PGR142G3507 Punica granatum HOM05D000825 ORTHO05D002486 3.0e-06 55.1 73 41.1
Solyc06g071070.1 Solanum lycopersicum HOM05D000825 ORTHO05D002486 3.0e-06 55.1 73 42.5
TAR623G0134 Trochodendron aralioides HOM05D000825 ORTHO05D002486 3.0e-06 55.1 73 43.8
Actinidia22090 Actinidia chinensis HOM05D000825 ORTHO05D002486 3.9e-06 54.7 112 33.0
C05p63070 Brassica napus HOM05D000825 ORTHO05D002486 3.9e-06 54.7 73 41.1
Migut.K00014 Erythranthe guttata HOM05D000825 ORTHO05D002486 3.9e-06 54.7 73 42.5
Thhalv10021320m.g Eutrema salsugineum HOM05D000825 ORTHO05D002486 3.9e-06 54.7 73 39.7
Rhsim09G0004900 Rhododendron simsii HOM05D000825 ORTHO05D002486 3.9e-06 54.7 112 33.0
Atru.chr2.1356 Acer truncatum HOM05D000825 ORTHO05D002486 5.1e-06 54.3 73 41.1
Atru.chr2.1373 Acer truncatum HOM05D000825 ORTHO05D002486 5.1e-06 54.3 73 41.1
ECA233G6063 Erigeron canadensis HOM05D000825 ORTHO05D002486 5.1e-06 54.3 73 38.4
Nitab4.5_0002825g0040 Nicotiana tabacum HOM05D000825 ORTHO05D002486 5.1e-06 54.3 73 41.1
Sp3g02950 Schrenkiella parvula HOM05D000825 ORTHO05D002486 5.1e-06 54.3 73 38.4
A01p41100 Brassica napus HOM05D000825 ORTHO05D002486 6.6e-06 53.9 72 43.1
A05p43370 Brassica napus HOM05D000825 ORTHO05D002486 6.6e-06 53.9 73 39.7
Cpa.g.sc51.99 Carica papaya HOM05D000825 ORTHO05D002486 6.6e-06 53.9 72 40.3
CiPaw.05G144700 Carya illinoinensis HOM05D000825 ORTHO05D002486 6.6e-06 53.9 73 41.1
Potri.013G059000 Populus trichocarpa HOM05D000825 ORTHO05D002486 6.6e-06 53.9 112 33.0
Sabra13G0052500 Salix brachista HOM05D000825 ORTHO05D002486 6.6e-06 53.9 73 41.1
Ah.13g075300 Amaranthus hybridus HOM05D000825 ORTHO05D002486 8.6e-06 53.5 112 31.2
AT3G03980 Arabidopsis thaliana HOM05D000825 ORTHO05D002486 8.6e-06 53.5 73 39.7
BcaC04g18716 Brassica carinata HOM05D000825 ORTHO05D002486 8.6e-06 53.5 73 42.5
C09p58770 Brassica napus HOM05D000825 ORTHO05D002486 8.6e-06 53.5 73 42.5
Carub.0003s0323 Capsella rubella HOM05D000825 ORTHO05D002486 8.6e-06 53.5 73 41.1
CAN.G65.119 Capsicum annuum HOM05D000825 ORTHO05D002486 8.6e-06 53.5 73 43.8
QL07p020142 Quercus lobata HOM05D000326 ORTHO05D002486 8.6e-06 53.5 71 43.7
PGSC0003DMG400033099 Solanum tuberosum HOM05D000825 ORTHO05D002486 8.6e-06 53.5 73 41.1


User provided reference genes

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