Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g020090 Medicago truncatula HOM05D009242 ORTHO05D011305 7.8e-52 206.8 103 100.0
Medtr5g020110 Medicago truncatula HOM05D009242 ORTHO05D011305 1.0e-35 153.3 103 72.8
Psat2g159760 Pisum sativum HOM05D009242 ORTHO05D011305 5.1e-35 151.0 105 76.2
Glyma.01G175800 Glycine max HOM05D009242 ORTHO05D011305 4.3e-34 147.9 110 68.2
Glyma.11G068100 Glycine max HOM05D009242 ORTHO05D011305 3.1e-32 141.7 109 68.8
Ca_24845_v3 Cicer arietinum L. HOM05D009242 ORTHO05D011305 1.3e-30 136.3 104 70.2
VMungo1215G2912 Vigna mungo HOM05D009242 ORTHO05D011305 4.9e-30 134.4 108 67.6
TPR.G22291 Trifolium pratense HOM05D009242 ORTHO05D011305 3.2e-29 131.7 106 67.0
Phvul.002G030100 Phaseolus vulgaris HOM05D009242 ORTHO05D011305 6.6e-27 124.0 108 64.8
Lj2g0022231 Lotus japonicus HOM05D009242 ORTHO05D011305 4.7e-25 117.9 112 56.2
Lalb_Chr05g0212791 Lupinus albus HOM05D009242 ORTHO05D011305 3.2e-21 105.1 103 54.4
Haze_15093 Corylus avellana HOM05D009242 ORTHO05D011305 5.1e-19 97.8 108 50.9
Potri.007G026000 Populus trichocarpa HOM05D009242 ORTHO05D011305 5.1e-19 97.8 110 46.4
Cfa004304 Carpinus fangiana HOM05D009242 ORTHO05D011305 2.5e-18 95.5 109 50.5
CiPaw.01G037600 Carya illinoinensis HOM05D009242 ORTHO05D011305 6.2e-17 90.9 106 48.1
Sabra07G0023000 Salix brachista HOM05D009242 ORTHO05D011305 1.3e-14 83.2 105 45.7
Aqoxy6G01102 Aquilegia oxysepala HOM05D009242 ORTHO05D011305 1.9e-13 79.3 110 42.7
QL06p045968 Quercus lobata HOM05D009242 ORTHO05D011305 7.1e-13 77.4 119 44.5
QL06p045982 Quercus lobata HOM05D009242 ORTHO05D011305 7.1e-13 77.4 119 44.5
QL08p007142 Quercus lobata HOM05D009242 ORTHO05D011305 7.1e-13 77.4 119 44.5
Cc07_g09490 Coffea canephora HOM05D009242 ORTHO05D011305 9.3e-13 77.0 111 44.1
Dinv39982 Davidia involucrata HOM05D009242 ORTHO05D011305 1.2e-12 76.6 104 43.3
Sc07g0000420 Simmondsia chinensis HOM05D009242 ORTHO05D011305 2.1e-12 75.9 114 43.0
DCAR_000730 Daucus carota HOM05D009242 ORTHO05D011305 1.7e-11 72.8 109 41.3
SalBow5G0014 Salvia bowleyana HOM05D009242 ORTHO05D011305 3.9e-11 71.6 102 39.2
COL.COLO4_22085 Corchorus olitorius HOM05D009242 ORTHO05D011305 1.9e-10 69.3 120 35.0
Solyc03g034057.1 Solanum lycopersicum HOM05D039626 ORTHO05D011305 1.1e-08 63.5 141 32.6
Oeu017200.1 Olea europaea HOM05D009242 ORTHO05D011305 3.1e-08 62.0 94 37.2
Nn1g04998 Nelumbo nucifera HOM05D009242 ORTHO05D011305 4.0e-08 61.6 109 36.7
Sopen03g006830 Solanum pennellii HOM05D039626 ORTHO05D011305 1.2e-07 60.1 141 29.8
unitig_46.g18667 Utricularia gibba HOM05D009242 ORTHO05D011305 3.4e-07 58.5 106 35.8
ATR0733G105 Amborella trichopoda HOM05D009242 ORTHO05D011305 5.8e-07 57.8 104 36.5
Lsat_1_v5_gn_2_76241 Lactuca sativa HOM05D009242 ORTHO05D011305 4.9e-06 54.7 103 30.1


User provided reference genes

Program Settings