Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g018140 Medicago truncatula HOM05D000529 ORTHO05D000472 5.6e-33 143.7 72 100.0
TPR.G11364 Trifolium pratense HOM05D000529 ORTHO05D000472 4.6e-19 97.4 56 85.7
TPR.G1688 Trifolium pratense HOM05D000529 ORTHO05D000472 1.8e-18 95.5 56 85.7
Ca_24796_v3 Cicer arietinum L. HOM05D000529 ORTHO05D000472 4.3e-17 90.9 56 82.1
Medtr5g018210 Medicago truncatula HOM05D000529 ORTHO05D000472 5.7e-17 90.5 56 80.4
Medtr5g018060 Medicago truncatula HOM05D000529 ORTHO05D000472 7.4e-17 90.1 56 78.6
TPR.G40614 Trifolium pratense HOM05D000529 ORTHO05D000472 1.6e-16 89.0 56 76.8
Medtr5g018070 Medicago truncatula HOM05D000529 ORTHO05D000472 2.2e-16 88.6 55 80.0
Psat2g164720 Pisum sativum HOM05D000529 ORTHO05D000472 2.2e-16 88.6 55 76.4
TPR.G11341 Trifolium pratense HOM05D000529 ORTHO05D000472 2.4e-15 85.1 56 71.4
Phvul.002G021700 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 4.5e-14 80.9 55 69.1
arahy.Tifrunner.gnm1.ann1.4KB2JU Arachis hypogaea HOM05D000529 ORTHO05D000472 1.3e-13 79.3 54 66.7
VMungo1215G3170 Vigna mungo HOM05D000529 ORTHO05D000472 2.9e-13 78.2 56 67.9
Lj2g0013161 Lotus japonicus HOM05D000529 ORTHO05D000472 3.2e-12 74.7 56 62.5
Glyma.01G183400 Glycine max HOM05D000529 ORTHO05D000472 5.5e-12 73.9 52 67.3
Glyma.11G058900 Glycine max HOM05D000529 ORTHO05D000472 7.2e-12 73.6 56 66.1
Medtr5g018120 Medicago truncatula HOM05D000529 ORTHO05D000472 4.6e-11 70.9 48 72.9
Lalb_Chr05g0213151 Lupinus albus HOM05D000529 ORTHO05D000472 3.0e-10 68.2 54 61.1
Lj4g0018288 Lotus japonicus HOM05D000529 ORTHO05D000472 4.8e-08 60.8 47 61.7
Potri.007G039300 Populus trichocarpa HOM05D000529 ORTHO05D000472 1.8e-07 58.9 42 64.3
Glyma.01G183300 Glycine max HOM05D000529 ORTHO05D000472 5.3e-07 57.4 48 56.2
Lj7A52G17 Lonicera japonica HOM05D000529 ORTHO05D000472 1.2e-06 56.2 48 58.3
Glyma.17G180300 Glycine max HOM05D000529 ORTHO05D000472 1.5e-06 55.8 42 59.5
Lj4g0017861 Lotus japonicus HOM05D000529 ORTHO05D000472 1.5e-06 55.8 45 57.8
HanXRQChr14g0430731 Helianthus annuus HOM05D000529 ORTHO05D000472 2.0e-06 55.5 47 55.3
Lalb_Chr16g0388441 Lupinus albus HOM05D000529 ORTHO05D000472 2.0e-06 55.5 51 52.9
Manes.12G094100 Manihot esculenta HOM05D000529 ORTHO05D000472 2.0e-06 55.5 40 65.0
GSVIVG01034429001 Vitis vinifera HOM05D000529 ORTHO05D000472 2.0e-06 55.5 41 58.5
QL06p043096 Quercus lobata HOM05D000529 ORTHO05D000472 2.6e-06 55.1 46 54.3
QL06p043133 Quercus lobata HOM05D000529 ORTHO05D000472 2.6e-06 55.1 46 54.3
Potri.007G039100 Populus trichocarpa HOM05D000529 ORTHO05D000472 3.4e-06 54.7 48 54.2
Potri.007G039201 Populus trichocarpa HOM05D000529 ORTHO05D000472 3.4e-06 54.7 41 56.1
Sabra07G0035100 Salix brachista HOM05D000529 ORTHO05D000472 3.4e-06 54.7 47 55.3
GSVIVG01034433001 Vitis vinifera HOM05D000529 ORTHO05D000472 3.4e-06 54.7 41 58.5
Cfa003972 Carpinus fangiana HOM05D000529 ORTHO05D000472 4.5e-06 54.3 38 63.2
GSVIVG01003571001 Vitis vinifera HOM05D000529 ORTHO05D000472 4.5e-06 54.3 38 63.2
GSVIVG01007143001 Vitis vinifera HOM05D000529 ORTHO05D000472 4.5e-06 54.3 38 63.2
Haze_15448 Corylus avellana HOM05D000529 ORTHO05D000472 5.9e-06 53.9 46 52.2
Medtr8g479430 Medicago truncatula HOM05D000529 ORTHO05D000472 5.9e-06 53.9 45 55.6
arahy.Tifrunner.gnm1.ann1.HV9GRN Arachis hypogaea HOM05D000529 ORTHO05D000472 7.7e-06 53.5 55 47.3
HanXRQChr02g0048181 Helianthus annuus HOM05D000529 ORTHO05D000472 7.7e-06 53.5 42 59.5
QL06p043050 Quercus lobata HOM05D000529 ORTHO05D000472 7.7e-06 53.5 46 52.2
GSVIVG01034432001 Vitis vinifera HOM05D000529 ORTHO05D000472 7.7e-06 53.5 41 56.1


User provided reference genes

Program Settings