Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g017550 Medicago truncatula HOM05D000135 ORTHO05D000203 8.4e-44 181.0 92 100.0
Medtr5g017510 Medicago truncatula HOM05D000135 ORTHO05D000203 5.4e-35 151.8 93 86.0
Medtr5g017560 Medicago truncatula HOM05D000135 ORTHO05D000203 5.4e-35 151.8 93 86.0
TPR.G21277 Trifolium pratense HOM05D000135 ORTHO05D000203 7.8e-34 147.9 91 84.6
Ca_24776_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 1.3e-33 147.1 92 77.2
Phvul.002G019300 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 1.3e-28 130.6 93 73.1
Glyma.11G056500 Glycine max HOM05D000135 ORTHO05D000203 4.9e-28 128.6 92 69.6
Lj2g0000548 Lotus japonicus HOM05D000135 ORTHO05D000203 8.4e-28 127.9 92 67.4
Glyma.01G185600 Glycine max HOM05D000135 ORTHO05D000203 7.1e-27 124.8 92 67.4
VMungo1215G0656 Vigna mungo HOM05D000135 ORTHO05D000203 9.3e-27 124.4 93 68.8
Psat2g166920 Pisum sativum HOM05D000135 ORTHO05D000203 3.0e-25 119.4 85 75.3
Lalb_Chr16g0378511 Lupinus albus HOM05D000135 ORTHO05D000203 8.7e-25 117.9 102 61.8
VMungo0251G3415 Vigna mungo HOM05D000135 ORTHO05D000203 4.5e-21 105.5 93 61.3
Medtr5g017540 Medicago truncatula HOM05D000135 ORTHO05D000203 3.9e-17 92.4 59 78.0
Phvul.003G244275 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 5.1e-17 92.0 90 52.2
arahy.Tifrunner.gnm1.ann1.77Y3FG Arachis hypogaea HOM05D000135 ORTHO05D000203 2.5e-16 89.7 92 54.3
arahy.Tifrunner.gnm1.ann1.D3D30P Arachis hypogaea HOM05D000135 ORTHO05D000203 4.8e-15 85.5 92 53.3
Glyma.05G085200 Glycine max HOM05D000135 ORTHO05D000203 4.8e-15 85.5 97 50.5
Glyma.17G175400 Glycine max HOM05D000135 ORTHO05D000203 6.9e-14 81.6 98 51.0
Gohir.D03G021400 Gossypium hirsutum HOM05D000135 ORTHO05D000203 1.5e-13 80.5 88 53.4
Gorai.003G023100 Gossypium raimondii HOM05D000135 ORTHO05D000203 1.5e-13 80.5 88 53.4
Sabra07G0038000 Salix brachista HOM05D000135 ORTHO05D000203 2.2e-12 76.6 104 46.2
Gohir.A11G191800 Gossypium hirsutum HOM05D000135 ORTHO05D000203 3.8e-12 75.9 94 51.1
arahy.Tifrunner.gnm1.ann1.JMIG5W Arachis hypogaea HOM05D000135 ORTHO05D000203 6.5e-12 75.1 93 47.3
COL.COLO4_11402 Corchorus olitorius HOM05D000135 ORTHO05D000203 6.5e-12 75.1 92 45.7
Potri.007G042900 Populus trichocarpa HOM05D000135 ORTHO05D000203 8.4e-12 74.7 104 45.2
Gohir.D11G198300 Gossypium hirsutum HOM05D000135 ORTHO05D000203 1.1e-11 74.3 93 51.6
Gorai.007G212400 Gossypium raimondii HOM05D000135 ORTHO05D000203 1.1e-11 74.3 93 51.6
Haze_15414 Corylus avellana HOM05D000135 ORTHO05D000203 1.4e-11 73.9 70 52.9
Manes.13G127700 Manihot esculenta HOM05D000135 ORTHO05D000203 3.2e-11 72.8 76 56.6
QL06p041758 Quercus lobata HOM05D000135 ORTHO05D000203 3.2e-11 72.8 93 48.4
Thecc.01G054700 Theobroma cacao HOM05D000135 ORTHO05D000203 4.2e-11 72.4 89 46.1
Duzib147G1692 Durio zibethinus HOM05D000135 ORTHO05D000203 5.5e-11 72.0 92 48.9
Cfa004010 Carpinus fangiana HOM05D000135 ORTHO05D000203 7.1e-11 71.6 70 51.4
FAN19G0794 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.1e-10 70.1 89 43.8
MSTRG.15389 Avicennia marina HOM05D000135 ORTHO05D000203 4.6e-10 68.9 89 44.9
Duzib187G0789 Durio zibethinus HOM05D000135 ORTHO05D000203 1.0e-09 67.8 84 48.8
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 2.3e-09 66.6 94 45.7
SalBow5G1733 Salvia bowleyana HOM05D000135 ORTHO05D000203 2.3e-09 66.6 76 51.3
SalBow5G5503 Salvia bowleyana HOM05D000135 ORTHO05D000203 2.3e-09 66.6 76 51.3
FAN26G2503 Fragaria x ananassa HOM05D000955 ORTHO05D003340 3.9e-09 65.9 72 47.2
TAR381G0503 Trochodendron aralioides HOM05D000135 ORTHO05D000203 5.1e-09 65.5 91 47.3
TAR628G0143 Trochodendron aralioides HOM05D000135 ORTHO05D000203 5.1e-09 65.5 92 46.7
TAR628G0636 Trochodendron aralioides HOM05D000135 ORTHO05D000203 5.1e-09 65.5 92 46.7
Actinidia36498 Actinidia chinensis HOM05D000135 ORTHO05D000203 8.7e-09 64.7 99 44.4
Cfa004515 Carpinus fangiana HOM05D000135 ORTHO05D000203 8.7e-09 64.7 91 42.9
CiPaw.05G006300 Carya illinoinensis HOM05D000135 ORTHO05D000203 8.7e-09 64.7 96 42.7
FvH4_1g15930 Fragaria vesca HOM05D000135 ORTHO05D000203 8.7e-09 64.7 72 45.8
TWI53G1405 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 8.7e-09 64.7 83 49.4
Ciclev10029994m.g Citrus clementina HOM05D000135 ORTHO05D000203 1.1e-08 64.3 89 42.7
MELO3C020900.2 Cucumis melo HOM05D000135 ORTHO05D000203 1.1e-08 64.3 92 46.7
Atru.chr3.341 Acer truncatum HOM05D000135 ORTHO05D000203 1.5e-08 63.9 97 43.3
CsaV3_2G016890 Cucumis sativus L. HOM05D000135 ORTHO05D000203 1.5e-08 63.9 92 46.7
PGR142G3781 Punica granatum HOM05D000135 ORTHO05D000203 1.9e-08 63.5 96 41.7
PGR142G2931 Punica granatum HOM05D000135 ORTHO05D000203 3.3e-08 62.8 96 43.8
QL11p035985 Quercus lobata HOM05D000135 ORTHO05D000203 3.3e-08 62.8 84 44.0
ClCG02G012820 Citrullus lanatus HOM05D000135 ORTHO05D000203 4.3e-08 62.4 75 45.3
Haze_10074 Corylus avellana HOM05D000135 ORTHO05D000203 4.3e-08 62.4 63 50.8
MD02G1171100 Malus domestica HOM05D000135 ORTHO05D000203 4.3e-08 62.4 88 40.9
CANSAT01G1352 Cannabis sativa HOM05D000135 ORTHO05D000203 5.7e-08 62.0 99 40.4
Aqoxy5G01242 Aquilegia oxysepala HOM05D000135 ORTHO05D000203 7.4e-08 61.6 92 43.5
CANSAT25G3257 Cannabis sativa HOM05D000135 ORTHO05D000203 1.3e-07 60.8 94 41.5
CSS0005567 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 1.6e-07 60.5 92 42.4
Ah.02g124280 Amaranthus hybridus HOM05D000135 ORTHO05D000203 2.2e-07 60.1 101 44.6
CiPaw.01G018900 Carya illinoinensis HOM05D000135 ORTHO05D000203 2.2e-07 60.1 89 47.2
Ca_18679_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 3.7e-07 59.3 94 41.5
Sc18g0004060 Simmondsia chinensis HOM05D000135 ORTHO05D000203 3.7e-07 59.3 92 46.7
Dinv39860 Davidia involucrata HOM05D000135 ORTHO05D000203 6.3e-07 58.5 71 50.7
Lj4g0025559 Lotus japonicus HOM05D000135 ORTHO05D000203 6.3e-07 58.5 95 44.2
Prupe.8G123900 Prunus persica HOM05D000135 ORTHO05D000203 8.2e-07 58.2 91 40.7
Solyc02g065000.1 Solanum lycopersicum HOM05D000135 ORTHO05D000203 1.1e-06 57.8 54 57.4
Sopen02g015130 Solanum pennellii HOM05D000135 ORTHO05D000203 1.1e-06 57.8 54 57.4
FvH4_2g06140 Fragaria vesca HOM05D000135 ORTHO05D000203 1.4e-06 57.4 94 38.3
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.4e-06 57.4 94 38.3
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.4e-06 57.4 94 38.3
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.4e-06 57.4 94 38.3
MD10G1094100 Malus domestica HOM05D000135 ORTHO05D000203 1.4e-06 57.4 95 40.0
Ah.11g040630 Amaranthus hybridus HOM05D000135 ORTHO05D000203 1.8e-06 57.0 79 45.6
CSS0001406 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 1.8e-06 57.0 96 43.8
ECA238G2850 Erigeron canadensis HOM05D000135 ORTHO05D000203 1.8e-06 57.0 91 38.5
FAN23G1378 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.8e-06 57.0 43 58.1
MD05G1080100 Malus domestica HOM05D000135 ORTHO05D000203 1.8e-06 57.0 79 44.3
Sed0008130 Sechium edule HOM05D000135 ORTHO05D000203 1.8e-06 57.0 71 46.5
PGSC0003DMG400039532 Solanum tuberosum HOM05D000135 ORTHO05D000203 1.8e-06 57.0 54 57.4
Atru.chr5.2711 Acer truncatum HOM05D000135 ORTHO05D000203 2.4e-06 56.6 94 38.3
CAN.G165.18 Capsicum annuum HOM05D000135 ORTHO05D000203 2.4e-06 56.6 83 48.2
FAN01G2430 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.4e-06 56.6 81 42.0
FAN01G2941 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.4e-06 56.6 81 42.0
Glyma.07G212000 Glycine max HOM05D000135 ORTHO05D000203 3.1e-06 56.2 85 44.7
TPR.G28489 Trifolium pratense HOM05D000135 ORTHO05D000203 3.1e-06 56.2 106 37.7
Cfa004516 Carpinus fangiana HOM05D000135 ORTHO05D000203 4.1e-06 55.8 78 46.2
Hma1.2p1_0370F.1_g137840 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 4.1e-06 55.8 78 47.4
MD15G1282600 Malus domestica HOM05D000135 ORTHO05D000203 5.3e-06 55.5 92 41.3
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 5.3e-06 55.5 83 48.2
CSS0017640 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 6.9e-06 55.1 96 42.7
Glyma.02G133000 Glycine max HOM05D000135 ORTHO05D000203 6.9e-06 55.1 86 48.8
PSO210G1763 Papaver somniferum HOM05D000135 ORTHO05D000203 6.9e-06 55.1 91 42.9
Aqoxy5G01243 Aquilegia oxysepala HOM05D000135 ORTHO05D000203 9.0e-06 54.7 78 46.2
PSO170G0143 Papaver somniferum HOM05D000135 ORTHO05D000203 9.0e-06 54.7 91 42.9


User provided reference genes

Program Settings