Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g016930 Medicago truncatula HOM05D006615 ORTHO05D007999 2.1e-28 128.3 61 100.0
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 2.5e-18 94.7 55 83.6
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 1.6e-17 92.0 55 81.8
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 9.0e-16 86.3 55 72.7
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 2.0e-15 85.1 53 71.7
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 4.5e-15 84.0 53 69.8
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 4.5e-15 84.0 53 71.7
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 2.2e-14 81.6 53 69.8
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 3.8e-14 80.9 55 67.3
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 3.8e-14 80.9 53 69.8
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 6.5e-14 80.1 53 67.9
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 6.5e-14 80.1 53 67.9
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 6.5e-14 80.1 53 67.9
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 1.4e-13 79.0 53 67.9
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 1.4e-13 79.0 53 67.9
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 2.5e-13 78.2 53 67.9
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 3.2e-13 77.8 53 66.0
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 5.5e-13 77.0 53 67.9
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 7.2e-13 76.6 53 66.0
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 9.4e-13 76.3 52 61.5
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 2.1e-12 75.1 53 64.2
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 2.7e-12 74.7 53 64.2
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 4.6e-12 73.9 53 62.3
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 7.9e-12 73.2 54 51.9
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 1.5e-10 68.9 53 56.6
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 9.7e-10 66.2 55 63.6
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 9.7e-10 66.2 54 46.3
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.7e-09 65.5 53 56.6
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.7e-09 65.5 53 56.6
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 6.3e-09 63.5 53 52.8
SEGI_04005 Sequoiadendron giganteum HOM05D003534 ORTHO05D004911 1.8e-08 62.0 52 50.0
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 1.5e-07 58.9 55 52.7
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 4.5e-07 57.4 53 52.8
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 5.9e-07 57.0 29 86.2
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 7.7e-07 56.6 55 52.7
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 7.7e-07 56.6 53 50.9
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.3e-06 55.8 53 50.9
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 1.3e-06 55.8 53 50.9
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.3e-06 55.8 53 52.8
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.7e-06 55.5 53 49.1
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 1.7e-06 55.5 53 50.9
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 1.7e-06 55.5 32 68.8
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 3.8e-06 54.3 55 49.1
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 6.5e-06 53.5 55 50.9


User provided reference genes

Program Settings