Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g015230 Medicago truncatula HOM05D007502 ORTHO05D010230 1.7e-88 329.3 173 100.0
Ca_24677_v3 Cicer arietinum L. HOM05D007502 ORTHO05D010230 4.1e-45 185.3 147 70.7
Lalb_Chr05g0213781 Lupinus albus HOM05D007502 ORTHO05D010230 1.3e-38 163.7 171 59.1
Psat2g171920 Pisum sativum HOM05D007502 ORTHO05D010230 1.1e-37 160.6 124 73.4
VMungo1215G1334 Vigna mungo HOM05D007502 ORTHO05D010230 2.2e-35 152.9 208 51.4
Glyma.11G046600 Glycine max HOM05D007502 ORTHO05D010230 8.5e-35 151.0 157 63.1
Lj2g0008607 Lotus japonicus HOM05D007502 ORTHO05D010230 1.8e-32 143.3 189 55.0
TPR.G9337 Trifolium pratense HOM05D007502 ORTHO05D010230 5.1e-32 141.7 132 65.2
Phvul.002G009800 Phaseolus vulgaris HOM05D007502 ORTHO05D010230 5.3e-29 131.7 175 54.9
arahy.Tifrunner.gnm1.ann1.69I0H7 Arachis hypogaea HOM05D007502 ORTHO05D010230 4.5e-28 128.6 163 55.8
arahy.Tifrunner.gnm1.ann1.W7GVX2 Arachis hypogaea HOM05D007502 ORTHO05D010230 7.2e-26 121.3 166 53.6
QL06p039372 Quercus lobata HOM05D007502 ORTHO05D010230 1.1e-21 107.5 167 43.7
Glyma.01G195100 Glycine max HOM05D007502 ORTHO05D010230 4.1e-21 105.5 110 60.9
Cfa004764 Carpinus fangiana HOM05D007502 ORTHO05D010230 7.0e-21 104.8 179 41.3
CiPaw.01G003100 Carya illinoinensis HOM05D007502 ORTHO05D010230 1.3e-19 100.5 177 42.9
Prupe.6G218900 Prunus persica HOM05D007502 ORTHO05D010230 1.7e-19 100.1 161 43.5
Ciclev10027603m.g Citrus clementina HOM05D007502 ORTHO05D010230 5.5e-18 95.1 171 42.1
Gohir.A11G213400 Gossypium hirsutum HOM05D007502 ORTHO05D010230 7.2e-18 94.7 160 42.5
Gorai.007G225000 Gossypium raimondii HOM05D007502 ORTHO05D010230 7.2e-18 94.7 164 42.7
Gohir.D11G209800 Gossypium hirsutum HOM05D007502 ORTHO05D010230 9.4e-18 94.4 160 42.5
CSS0024819 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 2.1e-17 93.2 169 39.6
Cpa.g.c26343.2 Carica papaya HOM05D007502 ORTHO05D010230 5.2e-16 88.6 174 40.8
MD15G1299000 Malus domestica HOM05D007502 ORTHO05D010230 6.8e-16 88.2 157 41.4
Haze_10361 Corylus avellana HOM05D007502 ORTHO05D010230 8.8e-16 87.8 186 37.6
GSVIVG01002329001 Vitis vinifera HOM05D007502 ORTHO05D010230 4.4e-15 85.5 168 37.5
CANSAT01G3167 Cannabis sativa HOM05D007502 ORTHO05D010230 5.7e-15 85.1 165 38.8
Cc07_g07260 Coffea canephora HOM05D007502 ORTHO05D010230 2.4e-13 79.7 133 39.1
RcHm_v2.0_Chr2g0108411 Rosa chinensis HOM05D007502 ORTHO05D010230 1.2e-12 77.4 151 41.7
PGSC0003DMG401021412 Solanum tuberosum HOM05D007502 ORTHO05D010230 1.2e-12 77.4 144 36.1
COL.COLO4_11595 Corchorus olitorius HOM05D007502 ORTHO05D010230 2.0e-12 76.6 173 36.4
Thecc.01G074400 Theobroma cacao HOM05D007502 ORTHO05D010230 2.0e-12 76.6 177 35.6
Solyc02g092200.3 Solanum lycopersicum HOM05D007502 ORTHO05D010230 2.7e-12 76.3 150 36.0
vmacro05426 Vaccinium macrocarpon HOM05D007502 ORTHO05D010230 2.7e-12 76.3 166 37.3
Potri.007G006000 Populus trichocarpa HOM05D007502 ORTHO05D010230 3.5e-12 75.9 169 39.1
Sopen02g036770 Solanum pennellii HOM05D007502 ORTHO05D010230 6.5e-11 71.6 159 35.2
Duzib187G0517 Durio zibethinus HOM05D007502 ORTHO05D010230 8.5e-11 71.2 189 34.9
BcaB02g09909 Brassica carinata HOM05D007502 ORTHO05D010230 1.9e-10 70.1 174 33.9
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 1.9e-10 70.1 154 40.9
Eucgr.I00691 Eucalyptus grandis HOM05D007502 ORTHO05D010230 1.9e-10 70.1 177 31.1
Thhalv10005075m.g Eutrema salsugineum HOM05D007502 ORTHO05D010230 4.2e-10 68.9 137 40.9
Peaxi162Scf00548g00223 Petunia axillaris HOM05D007502 ORTHO05D010230 5.5e-10 68.6 98 43.9
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 9.4e-10 67.8 156 38.5
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 9.4e-10 67.8 156 38.5
TAR628G1349 Trochodendron aralioides HOM05D007502 ORTHO05D010230 1.6e-09 67.0 151 37.1
MSTRG.3478 Avicennia marina HOM05D007502 ORTHO05D010230 4.7e-09 65.5 116 38.8
CARHR279950 Cardamine hirsuta HOM05D007502 ORTHO05D010230 8.0e-09 64.7 155 40.0
DCAR_025816 Daucus carota HOM05D007502 ORTHO05D010230 1.0e-08 64.3 159 34.0
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 1.8e-08 63.5 143 36.4
CSS0004026 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 2.3e-08 63.2 127 38.6
Lsat_1_v5_gn_2_82580 Lactuca sativa HOM05D007502 ORTHO05D010230 2.3e-08 63.2 180 32.8
Nitab4.5_0000142g0280 Nicotiana tabacum HOM05D007502 ORTHO05D010230 2.3e-08 63.2 178 28.7
A06p32780 Brassica napus HOM05D007502 ORTHO05D011692 3.0e-08 62.8 161 36.0
Actinidia11971 Actinidia chinensis HOM05D007502 ORTHO05D010230 4.0e-08 62.4 166 30.7
CDE06G1988 Ceratophyllum demersum HOM05D007502 ORTHO05D010230 8.8e-08 61.2 111 36.9
RhsimUnG0241800 Rhododendron simsii HOM05D007502 ORTHO05D010230 8.8e-08 61.2 148 37.8
AT5G67640 Arabidopsis thaliana HOM05D007502 ORTHO05D010230 1.5e-07 60.5 182 33.5
Haze_15266 Corylus avellana HOM05D064528 ORTHO05D043735 3.4e-07 59.3 99 39.4
ECA238G4396 Erigeron canadensis HOM05D007502 ORTHO05D010230 3.7e-06 55.8 167 32.3
Lsat_1_v5_gn_5_174300 Lactuca sativa HOM05D007502 ORTHO05D010230 4.9e-06 55.5 115 35.7
SalBow5G4540 Salvia bowleyana HOM05D007502 ORTHO05D010230 4.9e-06 55.5 129 39.5
Sabra07G0004300 Salix brachista HOM05D007502 ORTHO05D010230 6.3e-06 55.1 177 32.8
Carub.0008s2683 Capsella rubella HOM05D007502 ORTHO05D010230 8.3e-06 54.7 194 31.4


User provided reference genes

Program Settings