Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g014380 Medicago truncatula HOM05D002545 ORTHO05D002335 3.5e-134 481.5 223 100.0
TPR.G36671 Trifolium pratense HOM05D002545 ORTHO05D002335 7.1e-42 174.9 208 36.5
Medtr7g102890 Medicago truncatula HOM05D002545 ORTHO05D002335 2.4e-37 159.8 194 37.6
Medtr6g084160 Medicago truncatula HOM05D002545 ORTHO05D002335 1.2e-36 157.5 189 43.9
Medtr3g031290 Medicago truncatula HOM05D002545 ORTHO05D002335 2.4e-34 149.8 192 38.5
TPR.G37514 Trifolium pratense HOM05D002545 ORTHO05D002335 7.1e-34 148.3 187 38.5
Medtr3g065700 Medicago truncatula HOM05D002545 ORTHO05D002335 9.3e-34 147.9 185 36.2
Medtr6g044010 Medicago truncatula HOM05D002545 ORTHO05D002335 3.0e-32 142.9 186 37.6
Medtr8g078210 Medicago truncatula HOM05D002545 ORTHO05D002335 5.6e-31 138.7 104 58.7
Medtr5g053460 Medicago truncatula HOM05D002545 ORTHO05D002335 3.6e-30 136.0 182 41.2
Medtr5g041190 Medicago truncatula HOM05D002545 ORTHO05D002335 9.0e-29 131.3 190 33.2
Medtr8g037820 Medicago truncatula HOM05D002545 ORTHO05D002335 1.5e-28 130.6 135 39.3
Medtr8g024270 Medicago truncatula HOM05D002545 ORTHO05D002335 5.8e-28 128.6 193 31.1
Medtr2g104350 Medicago truncatula HOM05D002545 ORTHO05D002335 3.8e-27 125.9 199 29.1
Medtr1g046260 Medicago truncatula HOM05D002545 ORTHO05D002335 1.1e-26 124.4 148 40.5
Medtr4g061240 Medicago truncatula HOM05D002545 ORTHO05D002335 1.1e-26 124.4 129 41.1
Medtr4g036525 Medicago truncatula HOM05D002545 ORTHO05D002335 1.9e-26 123.6 101 52.5
Medtr5g080210 Medicago truncatula HOM05D002545 ORTHO05D002335 7.1e-26 121.7 145 38.6
Medtr3g052690 Medicago truncatula HOM05D002545 ORTHO05D002335 7.9e-25 118.2 139 37.4
Medtr5g054985 Medicago truncatula HOM05D002545 ORTHO05D002335 6.7e-24 115.2 129 39.5
Medtr2g062550 Medicago truncatula HOM05D002545 ORTHO05D002335 8.7e-24 114.8 189 31.2
Medtr5g036930 Medicago truncatula HOM05D002545 ORTHO05D002335 1.9e-23 113.6 87 50.6
Medtr1g055370 Medicago truncatula HOM05D002545 ORTHO05D002335 4.3e-23 112.5 87 48.3
Medtr0181s0040 Medicago truncatula HOM05D002545 ORTHO05D002335 2.1e-22 110.2 130 40.0
Medtr7g013900 Medicago truncatula HOM05D002545 ORTHO05D002335 4.8e-22 109.0 79 58.2
Medtr4g054990 Medicago truncatula HOM05D002545 ORTHO05D002335 2.4e-21 106.7 146 32.9
TPR.G36309 Trifolium pratense HOM05D002545 ORTHO05D002335 3.1e-21 106.3 148 33.8
Medtr5g025040 Medicago truncatula HOM05D002545 ORTHO05D002335 4.0e-21 105.9 102 44.1
TPR.G33155 Trifolium pratense HOM05D002545 ORTHO05D002335 9.0e-21 104.8 152 32.9
Medtr4g051010 Medicago truncatula HOM05D002545 ORTHO05D002335 2.0e-20 103.6 138 37.7
Medtr2g095160 Medicago truncatula HOM05D002545 ORTHO05D002335 2.6e-20 103.2 129 33.3
Medtr2g040320 Medicago truncatula HOM05D002545 ORTHO05D002335 1.7e-19 100.5 103 38.8
Medtr5g056220 Medicago truncatula HOM05D002545 ORTHO05D002335 1.7e-19 100.5 80 55.0
Medtr6g034085 Medicago truncatula HOM05D002545 ORTHO05D002335 6.4e-19 98.6 73 54.8
Medtr7g103360 Medicago truncatula HOM05D002545 ORTHO05D002335 6.4e-19 98.6 161 32.3
TPR.G7283 Trifolium pratense HOM05D002545 ORTHO05D002335 1.9e-18 97.1 133 36.1
Medtr5g054960 Medicago truncatula HOM05D002545 ORTHO05D002335 5.5e-18 95.5 112 37.5
TPR.G14179 Trifolium pratense HOM05D002545 ORTHO05D002335 1.6e-17 94.0 151 29.8
Medtr3g068165 Medicago truncatula HOM05D002545 ORTHO05D002335 2.1e-17 93.6 124 34.7
Medtr5g020880 Medicago truncatula HOM05D002545 ORTHO05D002335 2.7e-17 93.2 81 50.6
Medtr5g061110 Medicago truncatula HOM05D002545 ORTHO05D002335 4.6e-17 92.4 81 49.4
Medtr7g109880 Medicago truncatula HOM05D002545 ORTHO05D002335 6.0e-17 92.0 112 36.6
Medtr2g031500 Medicago truncatula HOM05D002545 ORTHO05D002335 1.8e-16 90.5 97 42.3
TPR.G17572 Trifolium pratense HOM05D002545 ORTHO05D002335 2.3e-16 90.1 144 31.9
Medtr6g016340 Medicago truncatula HOM05D002545 ORTHO05D002335 5.1e-16 89.0 154 31.2
TPR.G5246 Trifolium pratense HOM05D002545 ORTHO05D002335 4.3e-15 85.9 109 38.5
Medtr4g033220 Medicago truncatula HOM05D002545 ORTHO05D002335 7.4e-15 85.1 162 32.1
Medtr4g122170 Medicago truncatula HOM05D002545 ORTHO05D002335 7.4e-15 85.1 89 39.3
Medtr6g004570 Medicago truncatula HOM05D002545 ORTHO05D002335 1.3e-14 84.3 144 34.7
Medtr3g006390 Medicago truncatula HOM05D002545 ORTHO05D002335 6.2e-14 82.0 93 41.9
TPR.G35310 Trifolium pratense HOM05D002545 ORTHO05D002335 1.1e-13 81.3 126 31.7
TPR.G29823 Trifolium pratense HOM05D000003 ORTHO05D002335 2.4e-13 80.1 155 30.3
TPR.G39171 Trifolium pratense HOM05D002545 ORTHO05D002335 3.1e-13 79.7 97 35.1
Medtr8g027695 Medicago truncatula HOM05D002545 ORTHO05D002335 4.0e-13 79.3 46 69.6
Medtr5g069400 Medicago truncatula HOM05D002545 ORTHO05D002335 6.9e-13 78.6 88 43.2
TPR.G16000 Trifolium pratense HOM05D002545 ORTHO05D002335 9.0e-13 78.2 151 27.2
Medtr2g087750 Medicago truncatula HOM05D002545 ORTHO05D002335 2.0e-12 77.0 68 42.6
TPR.G11793 Trifolium pratense HOM05D002545 ORTHO05D002335 3.4e-12 76.3 130 27.7
ECA238G4438 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.5e-12 75.9 203 25.1
Medtr5g038480 Medicago truncatula HOM05D002545 ORTHO05D002335 2.2e-11 73.6 133 30.8
Medtr8g006020 Medicago truncatula HOM05D002545 ORTHO05D002335 2.9e-11 73.2 93 36.6
Medtr8g058405 Medicago truncatula HOM05D002545 ORTHO05D002335 2.9e-11 73.2 118 33.9
Medtr8g074940 Medicago truncatula HOM05D002545 ORTHO05D002335 8.4e-11 71.6 104 32.7
ECA246G5162 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-10 70.9 217 25.3
TPR.G40225 Trifolium pratense HOM05D000003 ORTHO05D000004 1.4e-10 70.9 222 23.4
ECA236G1963 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.9e-10 70.5 200 27.0
HanXRQChr15g0497301 Helianthus annuus HOM05D000003 ORTHO05D000004 1.9e-10 70.5 206 24.8
TPR.G9826 Trifolium pratense HOM05D002545 ORTHO05D002335 1.9e-10 70.5 143 25.9
Phvul.007G108600 Phaseolus vulgaris HOM05D009310 ORTHO05D010885 2.5e-10 70.1 120 30.8
Lj2g0012929 Lotus japonicus HOM05D009310 ORTHO05D002335 3.2e-10 69.7 108 29.6
ECA232G3889 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.1e-10 68.6 165 27.9
Medtr5g068470 Medicago truncatula HOM05D002545 ORTHO05D002335 7.1e-10 68.6 78 44.9
Medtr2g076890 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-09 67.4 134 31.3
Medtr7g022630 Medicago truncatula HOM05D002545 ORTHO05D002335 2.7e-09 66.6 55 43.6
TPR.G13582 Trifolium pratense HOM05D000003 ORTHO05D002335 2.7e-09 66.6 209 23.4
Lalb_Chr12g0196281 Lupinus albus HOM05D011108 ORTHO05D010885 3.5e-09 66.2 126 27.0
Aqoxy5G02498 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.6e-09 65.9 203 26.1
Medtr7g027170 Medicago truncatula HOM05D002545 ORTHO05D002335 7.9e-09 65.1 128 28.9
Phvul.007G129600 Phaseolus vulgaris HOM05D009310 ORTHO05D010885 7.9e-09 65.1 119 28.6
TPR.G10611 Trifolium pratense HOM05D001713 ORTHO05D001669 1.0e-08 64.7 128 29.7
TPR.G14763 Trifolium pratense HOM05D015915 ORTHO05D017839 1.0e-08 64.7 122 29.5
ECA232G3635 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.3e-08 64.3 208 23.1
CANSAT35G1373 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-08 63.9 180 21.7
ECA232G4857 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.3e-08 63.5 202 25.2
MBI01_g27612_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.3e-08 63.5 144 28.5
Medtr6g087750 Medicago truncatula HOM05D002545 ORTHO05D002335 2.3e-08 63.5 54 46.3
Medtr8g079590 Medicago truncatula HOM05D002545 ORTHO05D002335 2.3e-08 63.5 80 38.8
Medtr2g077630 Medicago truncatula HOM05D002545 ORTHO05D002335 3.0e-08 63.2 85 35.3
Atru.chr11.2510 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-08 62.8 119 28.6
BcaC08g42937 Brassica carinata HOM05D000003 ORTHO05D000925 3.9e-08 62.8 188 26.1
Medtr4g028380 Medicago truncatula HOM05D002545 ORTHO05D002335 5.1e-08 62.4 111 31.5
ECA233G6064 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.7e-08 62.0 162 24.7
Medtr1g040225 Medicago truncatula HOM05D002545 ORTHO05D002335 8.7e-08 61.6 55 45.5
TPR.G35652 Trifolium pratense HOM05D002545 ORTHO05D002335 8.7e-08 61.6 84 31.0
Medtr5g035400 Medicago truncatula HOM05D002545 ORTHO05D002335 1.1e-07 61.2 90 36.7
Phvul.003G252800 Phaseolus vulgaris HOM05D009310 ORTHO05D010885 1.5e-07 60.8 97 28.9
Os02g0118800 Oryza sativa ssp. japonica HOM05D019224 ORTHO05D012385 2.5e-07 60.1 191 23.6
Medtr4g022870 Medicago truncatula HOM05D002545 ORTHO05D002335 3.3e-07 59.7 103 28.2
PSO357G0590 Papaver somniferum HOM05D000003 ORTHO05D000004 4.3e-07 59.3 158 27.8
QL06p022241 Quercus lobata HOM05D000200 ORTHO05D000262 4.3e-07 59.3 191 23.0
QL04p048819 Quercus lobata HOM05D003044 ORTHO05D001869 5.7e-07 58.9 212 24.5
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 7.4e-07 58.5 150 28.0
ECA246G1543 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.4e-07 58.5 150 26.7
HanXRQChr09g0246731 Helianthus annuus HOM05D000003 ORTHO05D000004 7.4e-07 58.5 167 23.4
Medtr3g017430 Medicago truncatula HOM05D002545 ORTHO05D002335 9.6e-07 58.2 58 41.4
Medtr4g062340 Medicago truncatula HOM05D002545 ORTHO05D002335 9.6e-07 58.2 59 39.0
TPR.G24808 Trifolium pratense HOM05D002545 ORTHO05D002335 9.6e-07 58.2 80 33.8
Glyma.06G179701 Glycine max HOM05D009310 ORTHO05D010885 1.3e-06 57.8 65 33.8
PSO675G4334 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-06 57.8 167 24.6
Medtr1g072480 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-06 57.4 70 40.0
Medtr8g079570 Medicago truncatula HOM05D002545 ORTHO05D002335 1.6e-06 57.4 62 38.7
HanXRQChr01g0027891 Helianthus annuus HOM05D000003 ORTHO05D000004 2.1e-06 57.0 202 21.3
Atru.chr6.1197 Acer truncatum HOM05D000003 ORTHO05D002259 2.8e-06 56.6 99 28.3
BcaB05g23837 Brassica carinata HOM05D000003 ORTHO05D000925 2.8e-06 56.6 191 26.2
BcaC02g10519 Brassica carinata HOM05D001239 ORTHO05D000925 2.8e-06 56.6 147 26.5
Glyma.01G182350 Glycine max HOM05D002545 ORTHO05D046754 2.8e-06 56.6 128 29.7
Medtr4g088860 Medicago truncatula HOM05D002545 ORTHO05D002335 2.8e-06 56.6 47 53.2
Medtr6g072090 Medicago truncatula HOM05D002545 ORTHO05D002335 2.8e-06 56.6 70 32.9
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 2.8e-06 56.6 160 23.1
PGSC0003DMG400044008 Solanum tuberosum HOM05D000003 ORTHO05D000283 2.8e-06 56.6 119 28.6
CANSAT64G1703 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-06 56.2 174 26.4
ECA246G2574 Erigeron canadensis HOM05D000014 ORTHO05D000093 6.3e-06 55.5 164 22.6
HanXRQChr17g0550341 Helianthus annuus HOM05D000003 ORTHO05D000004 8.2e-06 55.1 157 21.0
Medtr4g052370 Medicago truncatula HOM05D002545 ORTHO05D002335 8.2e-06 55.1 49 40.8
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 8.2e-06 55.1 167 22.2


User provided reference genes

Program Settings