Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 2.2e-132 475.7 252 100.0
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 1.9e-99 366.3 252 80.6
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 2.0e-93 346.3 252 73.8
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 5.8e-93 344.7 252 74.2
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 1.4e-91 340.1 252 75.0
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 3.0e-89 332.4 253 72.7
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 3.9e-89 332.0 253 72.7
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 1.7e-84 316.6 251 70.5
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 1.1e-83 313.9 252 68.7
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 2.5e-83 312.8 252 69.0
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 9.3e-83 310.8 252 65.5
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 3.5e-82 308.9 252 70.6
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 4.6e-82 308.5 252 68.7
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 6.0e-82 308.1 253 68.8
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 6.0e-82 308.1 252 67.5
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.0e-81 307.4 253 68.8
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.0e-81 307.4 254 68.9
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.3e-81 307.0 252 65.9
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 2.3e-81 306.2 248 68.1
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 5.1e-81 305.1 253 65.6
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 8.7e-81 304.3 252 67.1
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.1e-80 303.9 211 74.4
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 1.5e-80 303.5 252 67.5
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.5e-80 303.5 211 73.0
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 2.5e-80 302.8 251 66.5
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 3.3e-80 302.4 253 66.0
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 3.3e-80 302.4 252 66.7
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 4.3e-80 302.0 255 65.1
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 5.7e-80 301.6 252 65.5
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 5.7e-80 301.6 212 75.9
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 7.4e-80 301.2 211 74.4
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 7.4e-80 301.2 211 74.4
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 1.3e-79 300.4 252 66.3
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 2.2e-79 299.7 250 66.8
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.8e-79 299.3 250 64.8
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 2.8e-79 299.3 211 73.5
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.3e-79 298.1 252 65.9
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.3e-79 298.1 252 65.9
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 1.1e-78 297.4 253 64.0
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 1.1e-78 297.4 252 64.7
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 1.1e-78 297.4 209 72.2
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.8e-78 296.6 252 66.7
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 3.1e-78 295.8 211 73.5
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 4.1e-78 295.4 252 64.3
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 5.3e-78 295.0 252 65.9
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.2e-77 293.9 261 64.4
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 1.5e-77 293.5 207 73.9
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 2.0e-77 293.1 209 73.7
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 5.9e-77 291.6 250 63.6
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 1.0e-76 290.8 211 71.6
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 1.0e-76 290.8 213 73.2
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 2.2e-76 289.7 206 73.8
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 8.5e-76 287.7 252 63.9
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 1.1e-75 287.3 253 62.1
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 1.4e-75 287.0 253 61.3
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 1.9e-75 286.6 209 70.3
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 2.5e-75 286.2 258 62.4
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 3.2e-75 285.8 209 69.9
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 7.2e-75 284.6 231 65.8
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 9.4e-75 284.3 252 60.3
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.6e-74 283.5 253 61.7
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 2.1e-74 283.1 212 71.2
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 3.6e-74 282.3 252 61.5
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 3.6e-74 282.3 252 61.1
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 3.6e-74 282.3 204 74.0
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 4.6e-74 282.0 253 62.8
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 7.9e-74 281.2 244 65.6
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 7.9e-74 281.2 253 61.3
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 7.9e-74 281.2 253 61.3
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 7.9e-74 281.2 212 69.8
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 2.3e-73 279.6 252 60.7
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 3.9e-73 278.9 208 67.8
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 5.1e-73 278.5 223 65.9
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 5.1e-73 278.5 252 60.7
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 5.1e-73 278.5 252 60.3
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 5.1e-73 278.5 231 67.1
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 7.4e-72 274.6 253 62.1
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 1.8e-70 270.0 209 66.5
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 1.8e-70 270.0 236 64.8
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 3.1e-70 269.2 207 67.6
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 4.1e-70 268.9 262 58.4
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 4.1e-70 268.9 245 60.8
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 6.9e-70 268.1 206 67.0
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 9.1e-70 267.7 252 61.1
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 3.4e-69 265.8 212 65.1
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 1.4e-67 260.4 246 58.9
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 3.2e-67 259.2 253 60.5
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.1e-64 250.8 233 60.5
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.5e-64 250.4 212 60.8
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 2.8e-63 246.1 220 58.6
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 4.1e-62 242.3 246 57.3
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.5e-61 240.4 229 58.1
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 5.9e-61 238.4 244 55.7
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 9.4e-59 231.1 201 62.7
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 1.0e-57 227.6 206 57.8
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 4.4e-56 222.2 209 54.5
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 9.7e-56 221.1 222 56.3
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 2.6e-53 213.0 232 52.2
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 5.5e-51 205.3 184 64.1
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 2.0e-48 196.8 252 53.2
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 6.3e-47 191.8 227 46.3
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 4.2e-43 179.1 211 49.3
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 7.2e-35 151.8 183 51.4
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.6e-34 150.6 98 80.6
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 1.6e-29 134.0 128 60.2
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 2.1e-26 123.6 129 58.9
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 8.0e-26 121.7 207 38.6
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 2.6e-24 116.7 79 77.2
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 2.0e-16 90.5 207 31.4
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 1.6e-13 80.9 156 32.1
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 4.6e-13 79.3 65 67.7
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 1.8e-09 67.4 50 70.0
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 8.9e-09 65.1 52 63.5


User provided reference genes

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