Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g011930 Medicago truncatula HOM05D001463 ORTHO05D001282 2.9e-60 235.0 114 100.0
Ca_05913_v3 Cicer arietinum L. HOM05D001463 ORTHO05D001282 1.1e-22 110.2 151 47.0
Medtr5g081360 Medicago truncatula HOM05D001463 ORTHO05D001282 1.4e-22 109.8 150 48.7
Medtr5g012280 Medicago truncatula HOM05D001463 ORTHO05D001282 4.6e-21 104.8 147 51.0
Psat2g037000 Pisum sativum HOM05D001463 ORTHO05D001282 6.6e-20 100.9 145 47.6
Glyma.02G252500 Glycine max HOM05D001463 ORTHO05D001282 7.3e-19 97.4 148 42.6
Glyma.14G064100 Glycine max HOM05D001463 ORTHO05D001282 1.2e-16 90.1 156 41.7
TPR.G25823 Trifolium pratense HOM05D001463 ORTHO05D001282 8.4e-15 84.0 101 48.5
Phvul.001G238300 Phaseolus vulgaris HOM05D001463 ORTHO05D001282 7.1e-14 80.9 155 37.4
CiPaw.01G293300 Carya illinoinensis HOM05D001463 ORTHO05D001282 3.0e-12 75.5 91 47.3
LjContig00141g0012501 Lotus japonicus HOM05D001463 ORTHO05D001282 8.7e-12 73.9 156 35.9
CiPaw.02G188100 Carya illinoinensis HOM05D001463 ORTHO05D001282 2.5e-11 72.4 59 59.3
Potri.008G061700 Populus trichocarpa HOM05D001463 ORTHO05D001282 4.3e-11 71.6 157 36.3
LjContig00141g0025360 Lotus japonicus HOM05D001463 ORTHO05D001282 5.6e-11 71.2 155 35.5
VMungo1383G2188 Vigna mungo HOM05D001463 ORTHO05D001282 5.6e-11 71.2 148 35.1
Lalb_Chr18g0052921 Lupinus albus HOM05D001463 ORTHO05D001282 1.6e-10 69.7 157 36.3
Haze_17151 Corylus avellana HOM05D001463 ORTHO05D001282 3.6e-10 68.6 154 35.7
Cpa.g.sc19.255 Carica papaya HOM05D001463 ORTHO05D001282 4.8e-10 68.2 153 36.6
Cc02_g07230 Coffea canephora HOM05D001463 ORTHO05D001282 1.1e-09 67.0 60 51.7
Potri.010G196400 Populus trichocarpa HOM05D001463 ORTHO05D001282 1.1e-09 67.0 60 55.0
Glyma.18G033302 Glycine max HOM05D001463 ORTHO05D001282 1.4e-09 66.6 159 34.0
Manes.07G122500 Manihot esculenta HOM05D001463 ORTHO05D001282 1.4e-09 66.6 60 55.0
QL08p062024 Quercus lobata HOM05D001463 ORTHO05D001282 4.0e-09 65.1 80 46.2
CsaV3_5G008550 Cucumis sativus L. HOM05D001463 ORTHO05D001282 6.9e-09 64.3 156 35.9
Dinv16275 Davidia involucrata HOM05D001463 ORTHO05D001282 1.2e-08 63.5 60 53.3
Lalb_Chr10g0104861 Lupinus albus HOM05D001463 ORTHO05D001282 2.0e-08 62.8 137 40.1
Sabra08G0045300 Salix brachista HOM05D001463 ORTHO05D001282 2.0e-08 62.8 53 56.6
GSVIVG01016436001 Vitis vinifera HOM05D001463 ORTHO05D001282 2.0e-08 62.8 62 54.8
MELO3C026564.2 Cucumis melo HOM05D001463 ORTHO05D001282 2.6e-08 62.4 156 33.3
CSS0007705 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 3.4e-08 62.0 60 53.3
Actinidia02381 Actinidia chinensis HOM05D001463 ORTHO05D001282 2.2e-07 59.3 64 48.4
Eucgr.J00967 Eucalyptus grandis HOM05D001463 ORTHO05D001282 3.8e-07 58.5 62 51.6
HanXRQChr07g0202081 Helianthus annuus HOM05D001463 ORTHO05D001282 3.8e-07 58.5 82 43.9
Potri.009G038300 Populus trichocarpa HOM05D001463 ORTHO05D001282 3.8e-07 58.5 57 52.6
QL01p028214 Quercus lobata HOM05D001463 ORTHO05D001282 3.8e-07 58.5 56 51.8
TAR369G0036 Trochodendron aralioides HOM05D001463 ORTHO05D001282 6.4e-07 57.8 62 51.6
MD11G1091200 Malus domestica HOM05D001463 ORTHO05D001282 8.4e-07 57.4 62 48.4
Dinv34453 Davidia involucrata HOM05D001463 ORTHO05D001282 1.1e-06 57.0 60 50.0
HanXRQChr07g0202041 Helianthus annuus HOM05D001463 ORTHO05D001282 1.4e-06 56.6 82 42.7
HanXRQChr07g0202061 Helianthus annuus HOM05D001463 ORTHO05D001282 1.4e-06 56.6 82 42.7
Lsat_1_v5_gn_2_117121 Lactuca sativa HOM05D001463 ORTHO05D001282 1.4e-06 56.6 60 51.7
Prupe.6G067400 Prunus persica HOM05D001463 ORTHO05D001282 1.4e-06 56.6 62 46.8
Nn2g11290 Nelumbo nucifera HOM05D001463 ORTHO05D001282 1.9e-06 56.2 66 50.0
vmacro07015 Vaccinium macrocarpon HOM05D001463 ORTHO05D001282 1.9e-06 56.2 57 49.1
ECA238G2806 Erigeron canadensis HOM05D001463 ORTHO05D001282 2.4e-06 55.8 60 51.7
MD03G1083100 Malus domestica HOM05D001463 ORTHO05D001282 2.4e-06 55.8 57 50.9
Rhsim03G0137600 Rhododendron simsii HOM05D001463 ORTHO05D001282 2.4e-06 55.8 52 51.9
Hund16038 Selenicereus undatus HOM05D001463 ORTHO05D001282 2.4e-06 55.8 56 51.8
Atru.chr12.267 Acer truncatum HOM05D001463 ORTHO05D001282 3.2e-06 55.5 61 49.2
COL.COLO4_25564 Corchorus olitorius HOM05D001463 ORTHO05D001282 3.2e-06 55.5 61 50.8
TWI31G0608 Tripterygium wilfordii HOM05D001463 ORTHO05D001282 3.2e-06 55.5 57 47.4
Hund04907 Selenicereus undatus HOM05D001463 ORTHO05D001282 4.2e-06 55.1 63 49.2
Thecc.10G031300 Theobroma cacao HOM05D001463 ORTHO05D001282 4.2e-06 55.1 60 48.3
Sabra10G0151000 Salix brachista HOM05D001463 ORTHO05D001282 5.5e-06 54.7 55 49.1
Sed0003709 Sechium edule HOM05D001463 ORTHO05D001282 7.1e-06 54.3 55 47.3
Manes.02G126600 Manihot esculenta HOM05D001463 ORTHO05D001282 9.3e-06 53.9 57 49.1


User provided reference genes

Program Settings