Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g010690 Medicago truncatula HOM05D000445 ORTHO05D000314 2.1e-28 128.3 61 100.0
Medtr4g047930 Medicago truncatula HOM05D000445 ORTHO05D000314 1.3e-14 82.4 40 92.5
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 6.5e-14 80.1 40 90.0
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 9.1e-08 59.7 43 67.4
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 9.1e-08 59.7 43 67.4
Sed0009579 Sechium edule HOM05D000445 ORTHO05D000314 2.0e-07 58.5 48 58.3
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 3.4e-07 57.8 43 67.4
AL1G45010 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 4.5e-07 57.4 39 71.8
AL2G20470 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 4.5e-07 57.4 39 71.8
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 4.5e-07 57.4 39 71.8
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 4.5e-07 57.4 39 71.8
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 4.5e-07 57.4 39 71.8
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 4.5e-07 57.4 39 71.8
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 4.5e-07 57.4 39 71.8
FvH4_c3g00160 Fragaria vesca HOM05D000445 ORTHO05D000314 5.9e-07 57.0 39 71.8
Lj2C1238G15 Lonicera japonica HOM05D000445 ORTHO05D000314 5.9e-07 57.0 39 71.8
Lj2C1238G34 Lonicera japonica HOM05D000445 ORTHO05D000314 5.9e-07 57.0 39 71.8
Lj2C1239G59 Lonicera japonica HOM05D000445 ORTHO05D000314 5.9e-07 57.0 39 71.8
Lju5009C0G1 Lonicera japonica HOM05D000445 ORTHO05D000314 5.9e-07 57.0 39 71.8
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 5.9e-07 57.0 39 71.8
Nn3g16153 Nelumbo nucifera HOM05D000445 ORTHO05D000314 5.9e-07 57.0 39 71.8
RcHm_v2.0_Chr2g0118451 Rosa chinensis HOM05D000445 ORTHO05D000314 5.9e-07 57.0 39 71.8
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 5.9e-07 57.0 39 71.8
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 5.9e-07 57.0 39 71.8
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 5.9e-07 57.0 39 71.8
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 1.0e-06 56.2 39 71.8
Hund01216 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund11510 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund19325 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund26851 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund26897 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund27472 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund27473 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund29661 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Hund29851 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.3e-06 55.8 39 69.2
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 1.7e-06 55.5 39 69.2
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 2.9e-06 54.7 39 69.2
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 2.9e-06 54.7 39 69.2
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 2.9e-06 54.7 39 69.2
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 2.9e-06 54.7 43 62.8
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 2.9e-06 54.7 39 69.2
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 3.8e-06 54.3 38 71.1
LjContig00318g0009654 Lotus japonicus HOM05D000445 ORTHO05D000314 5.0e-06 53.9 36 75.0
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 5.0e-06 53.9 36 75.0
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 5.0e-06 53.9 36 75.0
Nn1g10066 Nelumbo nucifera HOM05D000445 ORTHO05D000314 5.0e-06 53.9 38 68.4
Nn1g10127 Nelumbo nucifera HOM05D000445 ORTHO05D000314 5.0e-06 53.9 38 68.4
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 6.5e-06 53.5 36 72.2
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 6.5e-06 53.5 36 72.2
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 8.5e-06 53.1 36 72.2
Gohir.A03G089101 Gossypium hirsutum HOM05D000445 ORTHO05D000314 8.5e-06 53.1 39 66.7
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 8.5e-06 53.1 39 66.7
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 8.5e-06 53.1 39 66.7


User provided reference genes

Program Settings