Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g007110 Medicago truncatula HOM05D000051 ORTHO05D000015 9.2e-60 233.4 123 100.0
Medtr5g007090 Medicago truncatula HOM05D000051 ORTHO05D000015 3.9e-34 148.3 111 68.5
Medtr5g007130 Medicago truncatula HOM05D000051 ORTHO05D000015 8.7e-34 147.1 96 75.0
Medtr5g005700 Medicago truncatula HOM05D000051 ORTHO05D000015 4.3e-33 144.8 124 64.5
Glyma.17G194900 Glycine max HOM05D000051 ORTHO05D000015 3.2e-28 128.6 124 58.1
Medtr1g025870 Medicago truncatula HOM05D000051 ORTHO05D000015 2.1e-27 125.9 122 54.9
TPR.G26409 Trifolium pratense HOM05D000051 ORTHO05D000015 4.6e-27 124.8 110 56.4
TPR.G16797 Trifolium pratense HOM05D000051 ORTHO05D000015 1.1e-25 120.2 123 58.5
VMungo1080G0904 Vigna mungo HOM05D000051 ORTHO05D000015 1.5e-25 119.8 124 53.2
Lj1g0022871 Lotus japonicus HOM05D000051 ORTHO05D000015 1.9e-25 119.4 125 57.6
TPR.G16810 Trifolium pratense HOM05D000051 ORTHO05D000015 1.3e-24 116.7 125 56.0
TPR.G16816 Trifolium pratense HOM05D000051 ORTHO05D000015 1.3e-24 116.7 123 56.1
Medtr2g072710 Medicago truncatula HOM05D000051 ORTHO05D000015 2.4e-23 112.5 110 60.9
Medtr2g072720 Medicago truncatula HOM05D000051 ORTHO05D000015 2.4e-23 112.5 124 53.2
Glyma.13G263100 Glycine max HOM05D000051 ORTHO05D000015 3.1e-23 112.1 124 52.4
arahy.Tifrunner.gnm1.ann1.AI520R Arachis hypogaea HOM05D000051 ORTHO05D000015 7.6e-22 107.5 123 54.5
arahy.Tifrunner.gnm1.ann1.U4L8N2 Arachis hypogaea HOM05D000051 ORTHO05D000015 7.6e-22 107.5 123 54.5
Medtr4g032845 Medicago truncatula HOM05D000051 ORTHO05D000015 2.5e-20 102.4 107 55.1
arahy.Tifrunner.gnm1.ann1.NSP7CP Arachis hypogaea HOM05D000051 ORTHO05D000015 4.2e-20 101.7 110 52.7
arahy.Tifrunner.gnm1.ann1.L5GG2G Arachis hypogaea HOM05D000051 ORTHO05D000015 7.2e-20 100.9 110 51.8
Medtr5g006480 Medicago truncatula HOM05D000051 ORTHO05D000015 9.3e-20 100.5 87 62.1
Medtr6g022350 Medicago truncatula HOM05D000051 ORTHO05D000015 3.6e-19 98.6 105 49.5
Medtr2g072730 Medicago truncatula HOM05D000051 ORTHO05D000015 1.0e-18 97.1 110 53.6
TPR.G7505 Trifolium pratense HOM05D000051 ORTHO05D000015 1.4e-18 96.7 120 50.8
TPR.G29389 Trifolium pratense HOM05D000051 ORTHO05D000015 1.8e-18 96.3 113 52.2
TPR.G3816 Trifolium pratense HOM05D000051 ORTHO05D000015 1.5e-17 93.2 115 52.2
Medtr2g072650 Medicago truncatula HOM05D000051 ORTHO05D000015 3.3e-17 92.0 112 53.6
Lj3g0011429 Lotus japonicus HOM05D000051 ORTHO05D000015 5.7e-17 91.3 110 52.7
arahy.Tifrunner.gnm1.ann1.H22LZM Arachis hypogaea HOM05D000051 ORTHO05D000015 7.4e-17 90.9 123 49.6
arahy.Tifrunner.gnm1.ann1.FIN1P6 Arachis hypogaea HOM05D000051 ORTHO05D000015 3.1e-15 85.5 109 49.5
arahy.Tifrunner.gnm1.ann1.HYYB50 Arachis hypogaea HOM05D000051 ORTHO05D000015 3.1e-15 85.5 119 44.5
Lj2g0025192 Lotus japonicus HOM05D000051 ORTHO05D000015 3.1e-15 85.5 110 47.3
Medtr8g006910 Medicago truncatula HOM05D000051 ORTHO05D000015 6.9e-15 84.3 76 64.5
Lj2g0017050 Lotus japonicus HOM05D000051 ORTHO05D000015 9.1e-15 84.0 120 44.2
Lj2g0008890 Lotus japonicus HOM05D000051 ORTHO05D000015 1.4e-12 76.6 110 43.6
arahy.Tifrunner.gnm1.ann1.ELME12 Arachis hypogaea HOM05D002329 ORTHO05D000015 1.9e-12 76.3 121 45.5
Glyma.17G193700 Glycine max HOM05D000051 ORTHO05D000015 1.9e-12 76.3 111 45.0
Glyma.13G262900 Glycine max HOM05D000051 ORTHO05D000015 5.5e-12 74.7 110 44.5
arahy.Tifrunner.gnm1.ann1.NZKQ1I Arachis hypogaea HOM05D000051 ORTHO05D000015 2.1e-11 72.8 88 51.1
Glyma.13G262800 Glycine max HOM05D000051 ORTHO05D000015 2.1e-11 72.8 125 40.8
Medtr1g115250 Medicago truncatula HOM05D000051 ORTHO05D000015 2.1e-11 72.8 108 47.2
TPR.G4055 Trifolium pratense HOM05D000051 ORTHO05D000015 6.1e-11 71.2 110 41.8
Glyma.15G242200 Glycine max HOM05D000051 ORTHO05D000015 3.9e-10 68.6 110 39.1
Medtr3g018680 Medicago truncatula HOM05D000051 ORTHO05D000015 3.9e-10 68.6 105 41.9
Medtr7g094030 Medicago truncatula HOM05D000051 ORTHO05D030175 3.9e-10 68.6 90 46.7
Medtr7g094050 Medicago truncatula HOM05D000051 ORTHO05D000015 5.1e-10 68.2 90 47.8
Phvul.005G070500 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 8.8e-10 67.4 109 39.4
TPR.G15633 Trifolium pratense HOM05D000051 ORTHO05D000015 4.4e-09 65.1 122 39.3
Glyma.13G262700 Glycine max HOM05D000051 ORTHO05D000015 2.2e-08 62.8 110 38.2
TPR.G16809 Trifolium pratense HOM05D000051 ORTHO05D000015 2.8e-08 62.4 88 42.0
Medtr4g036215 Medicago truncatula HOM05D000096 ORTHO05D000045 4.8e-08 61.6 68 52.9
Phvul.005G065100 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 4.8e-08 61.6 110 40.0
VMungo1080G1404 Vigna mungo HOM05D000051 ORTHO05D000015 4.8e-08 61.6 109 39.4
Ca_16248_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 6.3e-08 61.2 107 41.1
TPR.G6877 Trifolium pratense HOM05D000051 ORTHO05D000015 1.8e-07 59.7 125 34.4
Medtr2g072530 Medicago truncatula HOM05D000051 ORTHO05D000015 3.1e-07 58.9 109 33.9
Glyma.15G242400 Glycine max HOM05D000051 ORTHO05D000015 4.1e-07 58.5 111 35.1
Lalb_Chr03g0031401 Lupinus albus HOM05D000051 ORTHO05D000015 4.1e-07 58.5 122 38.5
Phvul.005G064900 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 4.1e-07 58.5 110 35.5
arahy.Tifrunner.gnm1.ann1.45LTGK Arachis hypogaea HOM05D000051 ORTHO05D000015 7.0e-07 57.8 124 37.1
Medtr2g082880 Medicago truncatula HOM05D000051 ORTHO05D000015 7.0e-07 57.8 85 43.5
arahy.Tifrunner.gnm1.ann1.GLFE0R Arachis hypogaea HOM05D000051 ORTHO05D000015 9.1e-07 57.4 124 37.1
TPR.G16802 Trifolium pratense HOM05D000051 ORTHO05D000015 1.2e-06 57.0 122 34.4
TPR.G6826 Trifolium pratense HOM05D000051 ORTHO05D000015 1.2e-06 57.0 111 35.1
VMungo1080G0675 Vigna mungo HOM05D000051 ORTHO05D000015 2.0e-06 56.2 110 35.5


User provided reference genes

Program Settings