Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 0.0e+00 1156.7 726 100.0
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 5.0e-262 907.9 754 79.2
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 1.6e-244 849.7 721 70.3
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 1.3e-222 776.9 739 64.5
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 9.2e-216 754.2 744 66.5
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 2.1e-196 689.9 801 56.8
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 2.9e-193 679.5 684 67.7
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 9.6e-165 584.7 551 61.3
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 1.7e-161 573.9 801 52.8
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 7.2e-160 568.5 685 52.8
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 6.1e-151 538.9 551 58.1
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 9.4e-144 515.0 547 55.9
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.6e-143 514.2 741 48.0
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 1.8e-142 510.8 585 53.8
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.2e-140 503.8 719 49.7
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 2.8e-140 503.4 719 50.3
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 1.4e-139 501.1 588 52.0
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 5.3e-139 499.2 563 52.9
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 7.7e-138 495.4 545 52.5
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 7.7e-138 495.4 756 48.7
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 1.5e-136 491.1 541 53.6
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 1.8e-134 484.2 728 44.8
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 6.7e-134 482.3 546 54.2
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 1.5e-133 481.1 778 43.4
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 7.5e-133 478.8 547 51.4
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 2.8e-132 476.9 569 51.1
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 2.8e-132 476.9 547 52.1
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 2.8e-132 476.9 547 51.9
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 1.1e-131 474.9 547 52.3
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 5.3e-131 472.6 770 42.9
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 1.2e-130 471.5 730 46.3
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 4.5e-130 469.5 566 49.8
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 2.7e-127 460.3 722 48.1
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 4.7e-127 459.5 724 47.4
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 8.0e-127 458.8 574 48.3
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 1.4e-126 458.0 559 50.1
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.4e-126 458.0 722 47.9
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 1.5e-125 454.5 584 47.4
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 4.4e-125 453.0 727 43.2
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 7.5e-125 452.2 810 40.2
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 9.1e-123 445.3 549 49.4
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 1.6e-122 444.5 534 50.4
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 2.7e-122 443.7 595 46.2
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 5.9e-122 442.6 586 46.2
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 4.2e-120 436.4 568 47.4
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.6e-119 434.5 545 48.3
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 8.0e-119 432.2 742 42.3
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 2.3e-118 430.6 547 48.3
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 5.2e-118 429.5 547 47.7
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 8.8e-118 428.7 566 46.3
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 1.5e-117 427.9 723 42.3
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 4.4e-117 426.4 552 46.6
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 2.7e-114 417.2 535 46.9
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 3.8e-113 413.3 606 44.1
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 7.3e-112 409.1 540 47.0
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 2.8e-111 407.1 735 40.8
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 2.8e-111 407.1 491 49.5
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 6.1e-111 406.0 591 44.3
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 2.3e-110 404.1 540 46.5
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 5.2e-110 402.9 732 39.9
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 1.5e-109 401.4 537 49.2
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 3.4e-109 400.2 397 58.2
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 4.4e-109 399.8 492 48.0
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 5.7e-109 399.4 727 37.8
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 5.7e-109 399.4 727 37.8
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 9.8e-109 398.7 727 40.0
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 3.7e-108 396.7 556 45.9
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 4.9e-108 396.4 538 45.2
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 6.4e-108 396.0 536 46.3
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 9.2e-107 392.1 728 40.5
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 1.6e-106 391.3 582 44.2
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 1.5e-104 384.8 537 45.3
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 2.3e-102 377.5 584 44.5
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 4.1e-99 366.7 417 53.5
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 3.0e-97 360.5 573 45.0
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 2.5e-88 330.9 324 63.0
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 5.4e-83 313.2 440 45.0
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 3.5e-82 310.5 535 40.2
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 1.8e-78 298.1 776 37.2
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 4.2e-75 287.0 756 32.7
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 3.0e-73 280.8 561 36.7
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 9.0e-70 269.2 516 36.8
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 7.9e-66 256.1 742 32.3
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 1.8e-65 255.0 260 58.8
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.5e-64 251.9 389 41.1
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 6.4e-60 236.5 526 32.5
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 4.6e-58 230.3 368 39.4
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 2.0e-53 214.9 245 52.7
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 3.2e-51 207.6 520 30.8
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 7.4e-48 196.4 508 31.9
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 2.5e-35 154.8 313 37.7
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 1.1e-32 146.0 184 47.3
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.3e-25 121.7 169 49.1
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 9.1e-22 109.8 122 51.6
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 2.1e-18 98.6 125 50.4
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.9e-12 78.2 81 58.0
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.9e-12 78.2 137 36.5
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 4.2e-11 74.3 152 34.9
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 1.6e-10 72.4 69 55.1
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 8.0e-10 70.1 76 51.3
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 3.0e-09 68.2 87 43.7
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 4.4e-08 64.3 87 41.4
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 9.8e-08 63.2 87 41.4


User provided reference genes

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