Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 8.0e-101 370.5 202 100.0
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 5.0e-79 298.1 213 83.1
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 8.6e-63 244.2 216 70.4
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 1.6e-61 240.0 201 71.1
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 9.8e-59 230.7 212 66.5
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 1.7e-58 229.9 200 69.5
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 1.9e-54 216.5 181 75.1
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 1.6e-53 213.4 207 65.7
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 1.2e-48 197.2 187 59.9
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 2.7e-48 196.1 189 61.9
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 4.6e-48 195.3 187 61.0
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 4.6e-48 195.3 149 76.5
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 2.3e-47 193.0 178 60.1
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 5.1e-47 191.8 188 61.2
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 8.6e-47 191.0 192 60.9
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.1e-46 190.7 185 59.5
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 2.5e-46 189.5 190 59.5
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 7.3e-46 188.0 192 60.4
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 4.7e-45 185.3 185 57.8
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 5.2e-44 181.8 186 61.8
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 6.8e-44 181.4 185 56.8
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 6.8e-44 181.4 175 62.3
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 6.8e-44 181.4 182 59.9
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 1.2e-43 180.6 187 59.9
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 2.6e-43 179.5 180 57.2
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 3.4e-43 179.1 185 56.8
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 4.4e-43 178.7 187 55.1
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 7.6e-43 177.9 192 56.2
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 9.9e-43 177.6 178 62.4
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 1.7e-42 176.8 188 60.1
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 1.7e-42 176.8 188 60.1
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 2.2e-42 176.4 188 60.1
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 2.2e-42 176.4 188 60.1
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 2.9e-42 176.0 177 62.7
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 2.9e-42 176.0 188 60.1
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 3.8e-42 175.6 179 55.3
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 4.2e-41 172.2 188 57.4
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 7.1e-41 171.4 195 53.8
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.2e-40 170.6 240 45.8
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 1.2e-40 170.6 186 57.5
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 2.7e-40 169.5 181 55.2
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 3.5e-40 169.1 181 60.2
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 4.6e-40 168.7 194 55.2
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 6.0e-40 168.3 175 60.0
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 1.0e-39 167.5 187 58.8
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 1.7e-39 166.8 151 61.6
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 1.7e-39 166.8 181 54.1
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 5.1e-39 165.2 184 55.4
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 6.6e-39 164.9 180 57.8
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 6.6e-39 164.9 181 54.1
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 2.5e-38 162.9 190 53.2
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 2.5e-38 162.9 190 56.3
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 9.6e-38 161.0 180 57.2
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 8.1e-37 157.9 151 65.6
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 1.4e-36 157.1 206 51.5
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 2.4e-36 156.4 206 49.5
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 4.0e-36 155.6 170 56.5
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 2.0e-35 153.3 190 52.6
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 4.4e-35 152.1 183 50.8
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 5.8e-35 151.8 151 55.0
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 7.6e-35 151.4 159 60.4
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 8.4e-34 147.9 182 53.8
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 1.9e-33 146.7 177 54.2
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 3.2e-33 146.0 204 48.0
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 9.3e-33 144.4 178 52.8
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 9.3e-33 144.4 171 55.0
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 2.1e-32 143.3 188 51.6
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 2.1e-32 143.3 201 48.3
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 2.7e-32 142.9 179 51.4
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 3.5e-32 142.5 175 54.9
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 3.5e-32 142.5 175 54.9
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 1.3e-31 140.6 177 54.2
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 2.3e-31 139.8 189 49.2
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 3.0e-31 139.4 187 47.6
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 8.7e-31 137.9 166 51.2
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 1.1e-30 137.5 168 53.6
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 1.1e-30 137.5 168 53.6
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 1.1e-30 137.5 184 47.3
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 1.9e-30 136.7 183 47.5
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 7.3e-30 134.8 177 52.0
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 2.1e-29 133.3 150 55.3
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 6.2e-29 131.7 189 45.0
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 8.1e-29 131.3 175 48.6
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 8.1e-29 131.3 175 48.6
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 1.4e-28 130.6 161 51.6
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 4.0e-28 129.0 137 57.7
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 5.3e-28 128.6 128 62.5
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 6.9e-28 128.3 188 46.8
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 9.0e-28 127.9 128 57.8
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 2.0e-27 126.7 156 46.8
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 3.4e-27 125.9 176 45.5
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 9.9e-27 124.4 185 43.2
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 1.4e-25 120.6 150 55.3
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 2.1e-24 116.7 163 52.8
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 1.1e-20 104.4 107 63.6
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 1.0e-18 97.8 102 63.7
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 2.9e-18 96.3 191 38.7
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 3.2e-17 92.8 97 50.5
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 4.2e-17 92.4 143 40.6
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 7.1e-17 91.7 176 37.5
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 6.0e-16 88.6 108 59.3
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 2.3e-15 86.7 150 42.7
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 1.4e-12 77.4 179 39.7
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 2.2e-10 70.1 191 37.2
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 3.8e-10 69.3 75 52.0
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 2.5e-09 66.6 74 50.0
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 1.8e-07 60.5 176 35.8
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 1.8e-07 60.5 176 35.8


User provided reference genes

Program Settings