Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g103655 Medicago truncatula HOM05D000135 ORTHO05D000816 3.1e-19 99.0 49 100.0
Medtr4g103630 Medicago truncatula HOM05D000135 ORTHO05D000816 2.9e-17 92.4 49 93.9
Medtr4g103650 Medicago truncatula HOM05D000135 ORTHO05D000816 1.2e-15 87.0 45 95.6
TPR.G30002 Trifolium pratense HOM05D000135 ORTHO05D000816 1.2e-15 87.0 49 87.8
Ca_00913_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 8.8e-14 80.9 49 81.6
Ca_29979_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 8.8e-14 80.9 49 81.6
Psat0s3961g0080 Pisum sativum HOM05D000135 ORTHO05D000816 1.1e-13 80.5 46 84.8
Psat0s3961g0120 Pisum sativum HOM05D000135 ORTHO05D000816 3.3e-13 79.0 48 79.2
Psat4g065400 Pisum sativum HOM05D000135 ORTHO05D000816 8.2e-12 74.3 48 77.1
Lalb_Chr08g0237071 Lupinus albus HOM05D000135 ORTHO05D000816 3.5e-10 68.9 49 63.3
Glyma.17G128900 Glycine max HOM05D000135 ORTHO05D000816 4.5e-10 68.6 48 68.8
CsaV3_1G000650 Cucumis sativus L. HOM05D000135 ORTHO05D000816 2.2e-09 66.2 49 61.2
Glyma.05G047100 Glycine max HOM05D000135 ORTHO05D000816 5.0e-09 65.1 47 66.0
Lj4g0011466 Lotus japonicus HOM05D000135 ORTHO05D000816 6.5e-09 64.7 45 66.7
MELO3C026214.2 Cucumis melo HOM05D000135 ORTHO05D000816 1.9e-08 63.2 48 60.4
Lj4g0025643 Lotus japonicus HOM05D000135 ORTHO05D000816 2.5e-08 62.8 44 65.9
Prupe.5G152700 Prunus persica HOM05D000135 ORTHO05D000816 2.5e-08 62.8 48 60.4
Glyma.04G136300 Glycine max HOM05D000135 ORTHO05D000816 4.2e-08 62.0 48 60.4
Glyma.04G136600 Glycine max HOM05D000135 ORTHO05D000816 4.2e-08 62.0 48 60.4
RcHm_v2.0_Chr7g0190421 Rosa chinensis HOM05D000135 ORTHO05D000816 4.2e-08 62.0 47 59.6
Glyma.11G157100 Glycine max HOM05D000135 ORTHO05D000816 5.5e-08 61.6 44 65.9
Glyma.04G136200 Glycine max HOM05D000135 ORTHO05D000816 7.2e-08 61.2 48 60.4
Glyma.11G157200 Glycine max HOM05D000135 ORTHO05D000816 7.2e-08 61.2 44 65.9
Gohir.D11G039500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 7.2e-08 61.2 49 59.2
Gorai.007G042400 Gossypium raimondii HOM05D000135 ORTHO05D000816 7.2e-08 61.2 49 59.2
Lalb_Chr12g0202161 Lupinus albus HOM05D000135 ORTHO05D000816 9.4e-08 60.8 44 63.6
Sed0012230 Sechium edule HOM05D000135 ORTHO05D000816 9.4e-08 60.8 43 65.1
MD14G1158700 Malus domestica HOM05D000135 ORTHO05D000816 1.2e-07 60.5 48 58.3
Gohir.A11G035900 Gossypium hirsutum HOM05D000135 ORTHO05D000816 2.7e-07 59.3 49 57.1
Lj1g0021536 Lotus japonicus HOM05D000135 ORTHO05D000816 2.7e-07 59.3 49 55.1
Phvul.005G026000 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 2.7e-07 59.3 45 60.0
Medtr3g089070 Medicago truncatula HOM05D000135 ORTHO05D000816 3.6e-07 58.9 49 59.2
Thecc.03G127000 Theobroma cacao HOM05D000135 ORTHO05D000816 3.6e-07 58.9 48 60.4
ClCG06G017800 Citrullus lanatus HOM05D000135 ORTHO05D000816 4.7e-07 58.5 49 57.1
Duzib084G0108 Durio zibethinus HOM05D000135 ORTHO05D000816 6.1e-07 58.2 44 59.1
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 6.1e-07 58.2 47 55.3
FAN13G0461 Fragaria x ananassa HOM05D000135 ORTHO05D000816 6.1e-07 58.2 47 55.3
Lalb_Chr11g0069631 Lupinus albus HOM05D000135 ORTHO05D000816 6.1e-07 58.2 45 55.6
Ca_24507_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 8.0e-07 57.8 49 55.1
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 8.0e-07 57.8 47 55.3
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 1.0e-06 57.4 49 53.1
Medtr3g089090 Medicago truncatula HOM05D000135 ORTHO05D000816 1.0e-06 57.4 46 60.9
Ciclev10022753m.g Citrus clementina HOM05D000135 ORTHO05D000816 1.4e-06 57.0 51 54.9
Phvul.005G026100 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 1.4e-06 57.0 45 57.8
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 1.8e-06 56.6 47 53.2
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.8e-06 56.6 47 53.2
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 1.8e-06 56.6 48 56.2
Gohir.D04G078000 Gossypium hirsutum HOM05D000135 ORTHO05D000816 2.3e-06 56.2 48 52.1
Gorai.012G087800 Gossypium raimondii HOM05D000135 ORTHO05D000816 2.3e-06 56.2 48 52.1
Eucgr.B00124 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.0e-06 55.8 44 56.8
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.0e-06 55.8 44 59.1
Eucgr.B00128 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.0e-06 55.8 43 60.5
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 4.0e-06 55.5 48 52.1
Gohir.A05G339500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 4.0e-06 55.5 48 52.1
Glyma.06G171150 Glycine max HOM05D000135 ORTHO05D000816 6.7e-06 54.7 49 51.0
Lju41C51T3 Lonicera japonica HOM05D000135 ORTHO05D000816 6.7e-06 54.7 47 51.1
Peaxi162Scf00259g00018 Petunia axillaris HOM05D000135 ORTHO05D000816 6.7e-06 54.7 44 52.3
Psat0s14g0160 Pisum sativum HOM05D000135 ORTHO05D000816 6.7e-06 54.7 43 55.8
Eucgr.B00125 Eucalyptus grandis HOM05D000135 ORTHO05D000816 8.8e-06 54.3 44 54.5


User provided reference genes

Program Settings