Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g103630 Medicago truncatula HOM05D000135 ORTHO05D000816 4.1e-19 98.6 49 100.0
Medtr4g103655 Medicago truncatula HOM05D000135 ORTHO05D000816 2.2e-17 92.8 49 93.9
TPR.G30002 Trifolium pratense HOM05D000135 ORTHO05D000816 2.5e-16 89.4 49 89.8
Medtr4g103650 Medicago truncatula HOM05D000135 ORTHO05D000816 3.2e-16 89.0 45 97.8
Psat0s3961g0120 Pisum sativum HOM05D000135 ORTHO05D000816 6.1e-15 84.7 48 85.4
Ca_00913_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 1.8e-14 83.2 49 83.7
Ca_29979_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 1.8e-14 83.2 49 83.7
Psat0s3961g0080 Pisum sativum HOM05D000135 ORTHO05D000816 3.0e-14 82.4 46 87.0
Psat4g065400 Pisum sativum HOM05D000135 ORTHO05D000816 1.5e-13 80.1 48 83.3
Lalb_Chr08g0237071 Lupinus albus HOM05D000135 ORTHO05D000816 7.0e-11 71.2 49 65.3
Glyma.17G128900 Glycine max HOM05D000135 ORTHO05D000816 7.7e-10 67.8 48 66.7
Lj4g0011466 Lotus japonicus HOM05D000135 ORTHO05D000816 1.7e-09 66.6 45 68.9
CsaV3_1G000650 Cucumis sativus L. HOM05D000135 ORTHO05D000816 2.9e-09 65.9 49 59.2
Lj4g0025643 Lotus japonicus HOM05D000135 ORTHO05D000816 6.5e-09 64.7 44 68.2
Prupe.5G152700 Prunus persica HOM05D000135 ORTHO05D000816 6.5e-09 64.7 48 62.5
Glyma.05G047100 Glycine max HOM05D000135 ORTHO05D000816 8.5e-09 64.3 47 63.8
Glyma.04G136300 Glycine max HOM05D000135 ORTHO05D000816 1.1e-08 63.9 48 62.5
Glyma.04G136600 Glycine max HOM05D000135 ORTHO05D000816 1.1e-08 63.9 48 62.5
RcHm_v2.0_Chr7g0190421 Rosa chinensis HOM05D000135 ORTHO05D000816 1.1e-08 63.9 47 61.7
Glyma.11G157100 Glycine max HOM05D000135 ORTHO05D000816 1.5e-08 63.5 44 68.2
Glyma.04G136200 Glycine max HOM05D000135 ORTHO05D000816 1.9e-08 63.2 48 62.5
Glyma.11G157200 Glycine max HOM05D000135 ORTHO05D000816 1.9e-08 63.2 44 68.2
Lalb_Chr12g0202161 Lupinus albus HOM05D000135 ORTHO05D000816 2.5e-08 62.8 44 65.9
MELO3C026214.2 Cucumis melo HOM05D000135 ORTHO05D000816 3.2e-08 62.4 48 58.3
Lj1g0021536 Lotus japonicus HOM05D000135 ORTHO05D000816 5.5e-08 61.6 49 57.1
Medtr3g089070 Medicago truncatula HOM05D000135 ORTHO05D000816 7.2e-08 61.2 49 61.2
Phvul.005G026000 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 7.2e-08 61.2 45 62.2
Gohir.D11G039500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 9.4e-08 60.8 49 57.1
Gorai.007G042400 Gossypium raimondii HOM05D000135 ORTHO05D000816 9.4e-08 60.8 49 57.1
Ca_24507_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 1.6e-07 60.1 49 57.1
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.6e-07 60.1 47 57.4
FAN13G0461 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.6e-07 60.1 47 57.4
Lalb_Chr11g0069631 Lupinus albus HOM05D000135 ORTHO05D000816 1.6e-07 60.1 45 57.8
Sed0012230 Sechium edule HOM05D000135 ORTHO05D000816 1.6e-07 60.1 43 62.8
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 2.1e-07 59.7 47 57.4
MD14G1158700 Malus domestica HOM05D000135 ORTHO05D000816 2.1e-07 59.7 48 56.2
Medtr3g089090 Medicago truncatula HOM05D000135 ORTHO05D000816 2.7e-07 59.3 46 63.0
Gohir.A11G035900 Gossypium hirsutum HOM05D000135 ORTHO05D000816 3.6e-07 58.9 49 55.1
Phvul.005G026100 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 3.6e-07 58.9 45 60.0
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 4.7e-07 58.5 47 55.3
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 4.7e-07 58.5 47 55.3
ClCG06G017800 Citrullus lanatus HOM05D000135 ORTHO05D000816 6.1e-07 58.2 49 55.1
Thecc.03G127000 Theobroma cacao HOM05D000135 ORTHO05D000816 6.1e-07 58.2 48 58.3
Duzib084G0108 Durio zibethinus HOM05D000135 ORTHO05D000816 1.0e-06 57.4 44 56.8
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 1.4e-06 57.0 49 51.0
Glyma.06G171150 Glycine max HOM05D000135 ORTHO05D000816 1.4e-06 57.0 49 53.1
Ciclev10022753m.g Citrus clementina HOM05D000135 ORTHO05D000816 1.8e-06 56.6 51 52.9
Psat0s14g0160 Pisum sativum HOM05D000135 ORTHO05D000816 1.8e-06 56.6 43 58.1
Glyma.04G194800 Glycine max HOM05D000135 ORTHO05D000816 2.3e-06 56.2 49 53.1
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 3.0e-06 55.8 48 54.2
Psat5g140800 Pisum sativum HOM05D000135 ORTHO05D000816 3.0e-06 55.8 43 58.1
Lj3g0020733 Lotus japonicus HOM05D000135 ORTHO05D000816 4.0e-06 55.5 46 54.3
Eucgr.B00124 Eucalyptus grandis HOM05D000135 ORTHO05D000816 5.2e-06 55.1 44 54.5
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 5.2e-06 55.1 44 56.8
Eucgr.B00128 Eucalyptus grandis HOM05D000135 ORTHO05D000816 5.2e-06 55.1 43 58.1
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 6.7e-06 54.7 48 50.0
Peaxi162Scf00098g00156 Petunia axillaris HOM05D000135 ORTHO05D000816 8.8e-06 54.3 46 52.2


User provided reference genes

Program Settings