Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 3.3e-248 861.3 443 100.0
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 2.8e-191 672.2 456 77.0
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 4.3e-184 648.3 462 73.4
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 1.6e-183 646.4 447 73.2
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 1.6e-183 646.4 451 78.7
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 3.7e-175 618.6 458 69.9
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 6.3e-175 617.8 458 69.4
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 4.1e-174 615.1 445 72.6
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 6.5e-172 607.8 466 67.2
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 8.2e-167 590.9 477 63.9
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 1.2e-165 587.0 460 65.9
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.8e-164 582.0 453 66.0
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 8.5e-164 580.9 456 65.8
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.2e-162 577.0 458 65.1
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 3.9e-161 572.0 453 63.8
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 5.2e-161 571.6 456 63.6
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 1.5e-160 570.1 457 63.2
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 2.6e-160 569.3 458 64.4
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 7.0e-158 561.2 446 64.8
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 5.9e-157 558.1 463 62.9
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 7.7e-157 557.8 452 63.5
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 5.0e-156 555.1 447 63.1
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 6.5e-156 554.7 467 63.0
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 8.5e-156 554.3 463 62.4
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 8.5e-156 554.3 325 81.8
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 9.4e-155 550.8 450 61.8
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.4e-153 547.0 448 67.2
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 2.3e-153 546.2 461 61.8
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 4.0e-153 545.4 445 62.5
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 5.2e-153 545.0 454 62.1
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 6.8e-153 544.7 445 62.5
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 9.7e-152 540.8 464 60.1
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 1.7e-151 540.0 477 60.4
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 4.8e-151 538.5 446 65.0
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 6.3e-151 538.1 459 61.9
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 8.3e-151 537.7 449 62.4
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 8.3e-151 537.7 461 60.7
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 5.3e-150 535.0 449 62.1
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 5.3e-150 535.0 446 66.6
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 3.5e-149 532.3 459 61.2
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 7.7e-149 531.2 451 65.2
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 5.0e-148 528.5 454 65.9
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 1.5e-147 526.9 459 58.8
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 7.2e-147 524.6 445 60.9
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.6e-146 523.5 448 60.7
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 1.6e-146 523.5 445 60.9
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 4.7e-146 521.9 451 60.5
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 6.1e-146 521.5 455 62.9
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 1.4e-145 520.4 468 60.5
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 1.2e-144 517.3 455 62.0
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 1.5e-144 516.9 444 63.1
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 1.3e-143 513.8 459 63.4
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 1.7e-143 513.5 459 58.8
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 2.2e-143 513.1 456 63.4
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 6.3e-143 511.5 449 63.7
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.2e-141 507.3 307 77.9
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 1.2e-141 507.3 368 74.5
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 4.5e-141 505.4 463 61.3
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 2.9e-140 502.7 430 61.6
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 8.6e-140 501.1 447 59.7
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 1.5e-139 500.4 327 72.8
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 4.2e-139 498.8 456 57.7
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.2e-138 497.3 458 57.2
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 8.0e-138 494.6 461 57.9
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 1.8e-137 493.4 448 62.1
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 3.0e-137 492.7 447 59.1
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 4.0e-137 492.3 301 78.1
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 4.0e-137 492.3 452 58.2
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 6.8e-137 491.5 472 54.7
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 8.9e-137 491.1 451 57.9
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 1.2e-136 490.7 468 56.8
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 3.4e-136 489.2 448 62.7
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 4.4e-136 488.8 445 58.2
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 5.7e-136 488.4 449 59.0
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 7.5e-136 488.0 448 59.4
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 3.2e-134 482.6 475 57.9
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 1.0e-132 477.6 481 55.1
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.3e-132 477.2 471 53.7
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 1.7e-132 476.9 322 70.2
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 5.0e-132 475.3 447 57.5
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 4.3e-131 472.2 446 57.0
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 4.3e-131 472.2 456 56.1
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 1.0e-129 467.6 455 57.1
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 9.8e-128 461.1 479 55.5
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 1.3e-127 460.7 444 55.2
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 7.8e-125 451.4 420 58.8
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 1.3e-124 450.7 523 48.9
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 4.3e-123 445.7 302 67.9
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 1.0e-116 424.5 295 69.5
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 3.1e-113 412.9 278 70.9
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 5.2e-113 412.1 328 59.5
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 5.2e-113 412.1 328 59.5
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 1.3e-108 397.5 313 60.4
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 1.7e-108 397.1 448 47.5
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 8.1e-106 388.3 333 57.4
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.1e-105 386.3 406 54.4
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 1.2e-104 384.4 304 61.5
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 8.4e-103 378.3 230 77.8
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.3e-100 370.9 350 58.0
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 8.1e-98 361.7 220 77.7
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 5.3e-97 359.0 266 64.3
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 5.8e-96 355.5 390 52.8
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 7.6e-96 355.1 348 60.9
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 6.4e-95 352.1 361 54.6
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 9.6e-91 338.2 302 55.3
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 1.4e-78 297.7 203 70.4
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 1.7e-71 274.2 264 49.2
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 2.5e-67 260.4 276 44.9
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 1.1e-65 255.0 167 73.1
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 1.5e-64 251.1 203 59.1
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 1.5e-64 251.1 203 59.1
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 9.1e-57 225.3 120 85.8
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 2.4e-49 200.7 188 60.1
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 2.6e-43 180.6 272 43.0
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 7.0e-41 172.6 190 46.8
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 1.0e-36 158.7 129 57.4
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 5.2e-36 156.4 125 59.2
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 3.5e-32 143.7 80 77.5
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.7e-24 117.5 70 78.6
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 7.2e-22 109.4 68 70.6
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 4.7e-21 106.7 73 65.8
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 2.8e-13 80.9 53 71.7
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 5.2e-12 76.6 118 31.4
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 1.5e-11 75.1 62 51.6
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 9.2e-09 65.9 59 49.2
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 3.9e-07 60.5 41 63.4


User provided reference genes

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