Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g084920 Medicago truncatula HOM05D000439 ORTHO05D002302 1.6e-172 609.4 320 100.0
Medtr2g010420 Medicago truncatula HOM05D000439 ORTHO05D002302 7.5e-53 211.8 593 32.5
TPR.G32660 Trifolium pratense HOM05D000439 ORTHO05D002302 2.2e-52 210.3 519 36.0
Ca_01454_v3 Cicer arietinum L. HOM05D000439 ORTHO05D002302 1.3e-33 147.9 295 37.6
Medtr3g110385 Medicago truncatula HOM05D000439 ORTHO05D002302 2.1e-31 140.6 109 68.8
TPR.G33824 Trifolium pratense HOM05D000439 ORTHO05D002302 2.1e-31 140.6 544 28.5
TPR.G11256 Trifolium pratense HOM05D000439 ORTHO05D002302 8.3e-28 128.6 100 69.0
Medtr2g104190 Medicago truncatula HOM05D000439 ORTHO05D002302 7.1e-27 125.6 387 31.8
TPR.G12457 Trifolium pratense HOM05D000439 ORTHO05D002302 7.8e-26 122.1 107 64.5
TPR.G20709 Trifolium pratense HOM05D000439 ORTHO05D002302 2.8e-23 113.6 100 64.0
Medtr2g091260 Medicago truncatula HOM05D000439 ORTHO05D002302 8.1e-23 112.1 119 55.5
Medtr2g091370 Medicago truncatula HOM05D000439 ORTHO05D002302 1.4e-22 111.3 98 65.3
Medtr2g091285 Medicago truncatula HOM05D000439 ORTHO05D002302 1.8e-22 110.9 391 29.7
Medtr2g091290 Medicago truncatula HOM05D000439 ORTHO05D002302 2.0e-21 107.5 100 60.0
Medtr2g090980 Medicago truncatula HOM05D000439 ORTHO05D002302 2.6e-21 107.1 105 61.0
TPR.G20713 Trifolium pratense HOM05D000439 ORTHO05D002302 2.6e-21 107.1 104 61.5
Medtr2g091025 Medicago truncatula HOM05D000439 ORTHO05D002302 3.4e-21 106.7 122 54.1
TPR.G11525 Trifolium pratense HOM05D000439 ORTHO05D002302 9.9e-21 105.1 107 56.1
TPR.G11570 Trifolium pratense HOM05D000439 ORTHO05D002302 1.3e-20 104.8 125 53.6
TPR.G11624 Trifolium pratense HOM05D000439 ORTHO05D002302 1.7e-20 104.4 103 56.3
TPR.G20706 Trifolium pratense HOM05D000439 ORTHO05D002302 2.2e-20 104.0 103 58.3
Medtr2g091105 Medicago truncatula HOM05D000439 ORTHO05D002302 2.9e-20 103.6 103 59.2
TPR.G22517 Trifolium pratense HOM05D000439 ORTHO05D002302 6.4e-20 102.4 100 58.0
Medtr2g091080 Medicago truncatula HOM05D000439 ORTHO05D002302 1.1e-19 101.7 122 51.6
Medtr6g045183 Medicago truncatula HOM05D000439 ORTHO05D002302 1.1e-19 101.7 114 52.6
Medtr2g091030 Medicago truncatula HOM05D000439 ORTHO05D002302 1.9e-19 100.9 128 52.3
Medtr2g091070 Medicago truncatula HOM05D000439 ORTHO05D002302 4.1e-19 99.8 87 65.5
TPR.G11588 Trifolium pratense HOM05D000439 ORTHO05D002302 7.1e-19 99.0 103 54.4
TPR.G20707 Trifolium pratense HOM05D000439 ORTHO05D002302 9.2e-19 98.6 104 57.7
Psat0s1858g0280 Pisum sativum HOM05D000439 ORTHO05D002302 1.2e-18 98.2 90 61.1
Psat5g275960 Pisum sativum HOM05D000439 ORTHO05D002302 2.1e-18 97.4 107 56.1
Medtr2g091240 Medicago truncatula HOM05D000439 ORTHO05D002302 2.7e-18 97.1 121 50.4
Psat5g276040 Pisum sativum HOM05D000439 ORTHO05D002302 1.3e-17 94.7 103 53.4
Medtr2g091090 Medicago truncatula HOM05D000439 ORTHO05D002302 3.0e-17 93.6 124 47.6
Medtr5g078510 Medicago truncatula HOM05D000439 ORTHO05D002302 6.6e-17 92.4 109 51.4
arahy.Tifrunner.gnm1.ann1.9L902K Arachis hypogaea HOM05D000439 ORTHO05D002302 1.5e-16 91.3 102 49.0
Ca_20059_v3 Cicer arietinum L. HOM05D000439 ORTHO05D002302 1.9e-16 90.9 105 52.4
Glyma.12G015800 Glycine max HOM05D000439 ORTHO05D002302 1.9e-16 90.9 109 53.2
Lj3g0018169 Lotus japonicus HOM05D000439 ORTHO05D002302 1.9e-16 90.9 107 52.3
Medtr2g093010 Medicago truncatula HOM05D000439 ORTHO05D002302 2.5e-16 90.5 95 62.1
Medtr2g091015 Medicago truncatula HOM05D000439 ORTHO05D002302 4.3e-16 89.7 112 53.6
Lalb_Chr01g0000841 Lupinus albus HOM05D000439 ORTHO05D002302 7.3e-16 89.0 108 50.9
Lj4g0018346 Lotus japonicus HOM05D000439 ORTHO05D002302 2.8e-15 87.0 337 30.0
Medtr2g091250 Medicago truncatula HOM05D000439 ORTHO05D002302 2.8e-15 87.0 106 50.0
Medtr2g091245 Medicago truncatula HOM05D000439 ORTHO05D002302 3.6e-15 86.7 113 46.9
Medtr2g091110 Medicago truncatula HOM05D000439 ORTHO05D002302 1.1e-14 85.1 106 51.9
Lalb_Chr14g0367481 Lupinus albus HOM05D000439 ORTHO05D002302 1.8e-14 84.3 105 48.6
Lj3g0018557 Lotus japonicus HOM05D000439 ORTHO05D002302 4.0e-14 83.2 111 48.6
TPR.G20714 Trifolium pratense HOM05D000439 ORTHO05D002302 5.2e-14 82.8 83 61.4
Glyma.11G109500 Glycine max HOM05D000439 ORTHO05D002302 1.5e-13 81.3 103 47.6
arahy.Tifrunner.gnm1.ann1.8T23IY Arachis hypogaea HOM05D000439 ORTHO05D002302 4.4e-13 79.7 102 45.1
Psat5g276000 Pisum sativum HOM05D000439 ORTHO05D002302 4.4e-13 79.7 407 25.6
TPR.G20710 Trifolium pratense HOM05D000439 ORTHO05D002302 2.9e-12 77.0 101 50.5
TPR.G11522 Trifolium pratense HOM05D000439 ORTHO05D002302 8.4e-12 75.5 84 51.2
TPR.G8353 Trifolium pratense HOM05D000439 ORTHO05D002302 1.4e-11 74.7 76 53.9
Medtr2g091010 Medicago truncatula HOM05D000439 ORTHO05D002302 2.4e-11 73.9 180 32.8
Medtr2g091005 Medicago truncatula HOM05D000439 ORTHO05D002302 4.2e-11 73.2 169 32.5
Medtr2g091335 Medicago truncatula HOM05D000439 ORTHO05D002302 5.4e-11 72.8 431 25.3
MD04G1214600 Malus domestica HOM05D000439 ORTHO05D002302 7.1e-11 72.4 98 45.9
arahy.Tifrunner.gnm1.ann1.4R5PNE Arachis hypogaea HOM05D008486 ORTHO05D010657 9.3e-11 72.0 110 48.2
arahy.Tifrunner.gnm1.ann1.MSPK7M Arachis hypogaea HOM05D000439 ORTHO05D002302 1.6e-10 71.2 138 38.4
Medtr2g103620 Medicago truncatula HOM05D000439 ORTHO05D002302 1.6e-10 71.2 137 42.3
arahy.Tifrunner.gnm1.ann1.824BKL Arachis hypogaea HOM05D000439 ORTHO05D002302 2.1e-10 70.9 138 38.4
arahy.Tifrunner.gnm1.ann1.825KYQ Arachis hypogaea HOM05D000439 ORTHO05D002302 2.7e-10 70.5 117 40.2
Medtr2g103640 Medicago truncatula HOM05D000439 ORTHO05D002302 6.0e-10 69.3 157 40.1
arahy.Tifrunner.gnm1.ann1.BZ4NKF Arachis hypogaea HOM05D008486 ORTHO05D010657 1.0e-09 68.6 111 46.8
Dinv26588 Davidia involucrata HOM05D000439 ORTHO05D002302 1.0e-09 68.6 100 47.0
arahy.Tifrunner.gnm1.ann1.Z2T2IJ Arachis hypogaea HOM05D000439 ORTHO05D002302 2.3e-09 67.4 111 44.1
arahy.Tifrunner.gnm1.ann1.5F1FKW Arachis hypogaea HOM05D000439 ORTHO05D002302 5.1e-09 66.2 111 44.1
TPR.G23211 Trifolium pratense HOM05D000439 ORTHO05D002302 7.3e-08 62.4 62 56.5
Medtr5g038810 Medicago truncatula HOM05D000439 ORTHO05D002302 1.6e-07 61.2 403 23.8
Medtr2g091315 Medicago truncatula HOM05D000439 ORTHO05D002302 2.1e-07 60.8 173 30.6
CSS0048396 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D002302 4.8e-07 59.7 129 37.2
Manes.09G160800 Manihot esculenta HOM05D000439 ORTHO05D012413 8.1e-07 58.9 98 41.8
Medtr2g091325 Medicago truncatula HOM05D000439 ORTHO05D002302 1.4e-06 58.2 86 40.7
QL03p002736 Quercus lobata HOM05D000439 ORTHO05D002302 1.4e-06 58.2 96 39.6
Medtr2g091330 Medicago truncatula HOM05D000439 ORTHO05D002302 1.8e-06 57.8 186 30.1
Medtr4g046660 Medicago truncatula HOM05D000439 ORTHO05D002302 1.8e-06 57.8 99 40.4
Thecc.05G251700 Theobroma cacao HOM05D000439 ORTHO05D002302 1.8e-06 57.8 96 37.5
TPR.G20711 Trifolium pratense HOM05D000439 ORTHO05D413265 1.8e-06 57.8 87 47.1
FvH4_6g04550 Fragaria vesca HOM05D000439 ORTHO05D002302 3.1e-06 57.0 101 36.6
Prupe.6G334600 Prunus persica HOM05D000439 ORTHO05D002302 3.1e-06 57.0 98 38.8
TPR.G8900 Trifolium pratense HOM05D000439 ORTHO05D002302 3.1e-06 57.0 45 60.0
QL03p002724 Quercus lobata HOM05D000439 ORTHO05D002302 4.0e-06 56.6 96 39.6
CSS0004188 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D002302 5.3e-06 56.2 129 35.7
FAN14G4589 Fragaria x ananassa HOM05D000439 ORTHO05D002302 6.9e-06 55.8 192 27.6
Lj7C482G14 Lonicera japonica HOM05D000439 ORTHO05D002302 6.9e-06 55.8 143 34.3
vmacro05061 Vaccinium macrocarpon HOM05D000439 ORTHO05D002302 6.9e-06 55.8 95 43.2
Duzib177G0767 Durio zibethinus HOM05D000439 ORTHO05D002302 9.0e-06 55.5 120 35.8
Medtr7g056313 Medicago truncatula HOM05D000439 ORTHO05D002302 9.0e-06 55.5 115 34.8


User provided reference genes

Program Settings