Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g065780 Medicago truncatula HOM05D000520 ORTHO05D006660 5.2e-145 517.7 263 100.0
Medtr1g107565 Medicago truncatula HOM05D000520 ORTHO05D006660 1.4e-20 104.4 83 65.1
TPR.G13856 Trifolium pratense HOM05D000520 ORTHO05D006660 3.9e-15 86.3 66 74.2
Medtr1g055015 Medicago truncatula HOM05D000470 ORTHO05D262561 1.9e-14 84.0 42 95.2
arahy.Tifrunner.gnm1.ann1.Y3J10V Arachis hypogaea HOM05D000520 ORTHO05D006660 3.3e-14 83.2 102 50.0
Duzib268G0327 Durio zibethinus HOM05D000520 ORTHO05D006660 1.6e-13 80.9 69 62.3
arahy.Tifrunner.gnm1.ann1.BFI5I2 Arachis hypogaea HOM05D000520 ORTHO05D006660 2.1e-13 80.5 102 49.0
Cpa.g.sc211.1 Carica papaya HOM05D000520 ORTHO05D006660 2.8e-13 80.1 92 52.2
CiPaw.05G248300 Carya illinoinensis HOM05D000520 ORTHO05D006660 2.8e-13 80.1 68 57.4
Lalb_Chr06g0165561 Lupinus albus HOM05D000520 ORTHO05D006660 6.2e-13 79.0 67 64.2
Thecc.02G279600 Theobroma cacao HOM05D000520 ORTHO05D006660 1.4e-12 77.8 72 62.5
Duzib251G0101 Durio zibethinus HOM05D000520 ORTHO05D006660 5.3e-12 75.9 70 57.1
Phvul.007G038000 Phaseolus vulgaris HOM05D000520 ORTHO05D006660 6.9e-12 75.5 64 60.9
Duzib248G0732 Durio zibethinus HOM05D000520 ORTHO05D006660 2.0e-11 73.9 72 58.3
Glyma.20G126300 Glycine max HOM05D000520 ORTHO05D006660 2.6e-11 73.6 65 60.0
Haze_11022 Corylus avellana HOM05D000520 ORTHO05D006660 1.3e-10 71.2 62 62.9
VMungo0720G2306 Vigna mungo HOM05D000520 ORTHO05D006660 2.2e-10 70.5 66 56.1
CiPaw.06G012700 Carya illinoinensis HOM05D000520 ORTHO05D006660 1.9e-09 67.4 60 61.7
Prupe.1G323100 Prunus persica HOM05D000520 ORTHO05D006660 3.2e-09 66.6 64 62.5
Lalb_Chr21g0308471 Lupinus albus HOM05D000520 ORTHO05D006660 4.2e-09 66.2 64 59.4
QL01p002036 Quercus lobata HOM05D000520 ORTHO05D006660 5.5e-09 65.9 63 57.1
Lj5g0008903 Lotus japonicus HOM05D000520 ORTHO05D006660 7.1e-09 65.5 57 61.4
Potri.008G128400 Populus trichocarpa HOM05D000520 ORTHO05D006660 1.2e-08 64.7 56 58.9
RcHm_v2.0_Chr4g0441051 Rosa chinensis HOM05D000520 ORTHO05D006660 1.2e-08 64.7 60 56.7
Psat6g220320 Pisum sativum HOM05D000520 ORTHO05D006660 1.6e-08 64.3 44 68.2
FAN07G1117 Fragaria x ananassa HOM05D000520 ORTHO05D006660 2.7e-08 63.5 62 53.2
FAN22G1850 Fragaria x ananassa HOM05D000520 ORTHO05D006660 2.7e-08 63.5 62 53.2
Glyma.10G264000 Glycine max HOM05D000520 ORTHO05D006660 3.5e-08 63.2 66 56.1
Cfa008592 Carpinus fangiana HOM05D000520 ORTHO05D006660 6.0e-08 62.4 64 57.8
FvH4_4g32260 Fragaria vesca HOM05D000520 ORTHO05D006660 1.0e-07 61.6 63 47.6
FAN12G2402 Fragaria x ananassa HOM05D000520 ORTHO05D006660 1.0e-07 61.6 63 47.6
COL.COLO4_20462 Corchorus olitorius HOM05D000520 ORTHO05D006660 1.8e-07 60.8 65 58.5
MD16G1029800 Malus domestica HOM05D000520 ORTHO05D006660 1.8e-07 60.8 59 57.6
Oeu045880.1 Olea europaea HOM05D000520 ORTHO05D006660 6.7e-07 58.9 60 56.7
FAN17G1289 Fragaria x ananassa HOM05D000520 ORTHO05D006660 7.4e-06 55.5 71 43.7


User provided reference genes

Program Settings