Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g065770 Medicago truncatula HOM05D004894 ORTHO05D005689 1.8e-102 375.9 187 100.0
Medtr6g037940 Medicago truncatula HOM05D004894 ORTHO05D005689 4.6e-34 148.7 175 50.3
Medtr6g038010 Medicago truncatula HOM05D004894 ORTHO05D005689 4.6e-26 122.1 177 42.4
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 6.0e-26 121.7 175 38.3
Psat1g101040 Pisum sativum HOM05D004894 ORTHO05D005689 1.0e-25 120.9 187 39.0
Medtr6g037920 Medicago truncatula HOM05D004894 ORTHO05D005689 1.9e-24 116.7 168 42.9
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 3.3e-24 115.9 176 43.8
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 4.3e-24 115.5 176 40.3
TPR.G36348 Trifolium pratense HOM05D004894 ORTHO05D005689 7.3e-24 114.8 177 37.9
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 1.2e-23 114.0 173 37.6
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 2.8e-23 112.8 150 42.0
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 2.8e-23 112.8 177 40.7
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 1.1e-22 110.9 173 38.7
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 1.1e-22 110.9 173 38.7
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 1.8e-22 110.2 174 38.5
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 3.1e-22 109.4 188 37.8
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 4.0e-22 109.0 190 36.8
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 4.0e-22 109.0 175 36.0
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 4.0e-22 109.0 175 36.0
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 5.2e-22 108.6 172 37.2
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 2.6e-21 106.3 168 40.5
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 5.8e-21 105.1 175 39.4
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 2.9e-20 102.8 146 42.5
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 2.9e-20 102.8 176 36.9
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 4.9e-20 102.1 175 36.0
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 4.9e-20 102.1 169 39.1
Medtr6g037710 Medicago truncatula HOM05D004894 ORTHO05D005689 6.4e-20 101.7 174 40.2
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 1.1e-19 100.9 170 34.7
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 1.4e-19 100.5 173 34.1
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 1.4e-19 100.5 181 34.8
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 1.4e-19 100.5 146 36.3
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 5.4e-19 98.6 178 37.6
TPR.G28009 Trifolium pratense HOM05D004894 ORTHO05D005689 5.4e-19 98.6 177 37.3
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 7.1e-19 98.2 176 36.4
Medtr6g037700 Medicago truncatula HOM05D004894 ORTHO05D005689 1.2e-18 97.4 173 37.6
Phvul.007G082200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 6.0e-18 95.1 175 34.3
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 7.8e-18 94.7 177 35.0
Medtr6g034800 Medicago truncatula HOM05D004894 ORTHO05D005689 7.8e-18 94.7 183 39.3
Medtr6g037880 Medicago truncatula HOM05D004894 ORTHO05D005689 2.3e-17 93.2 147 42.2
Psat1g101000 Pisum sativum HOM05D004894 ORTHO05D005689 2.3e-17 93.2 175 34.9
VMungo0720G1196 Vigna mungo HOM05D004894 ORTHO05D005689 3.9e-17 92.4 171 35.1
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 5.1e-17 92.0 176 36.4
Medtr6g039260 Medicago truncatula HOM05D004894 ORTHO05D005689 1.1e-16 90.9 182 37.9
Phvul.007G082100 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.9e-16 90.1 175 34.3
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 3.3e-16 89.4 185 32.4
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 4.3e-16 89.0 177 35.6
Medtr6g037680 Medicago truncatula HOM05D004894 ORTHO05D005689 5.6e-16 88.6 178 36.0
TPR.G36349 Trifolium pratense HOM05D004894 ORTHO05D005689 5.6e-16 88.6 166 34.9
Ca_10673_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 1.6e-15 87.0 147 32.7
Psat0s6062g0040 Pisum sativum HOM05D004894 ORTHO05D005689 2.1e-15 86.7 172 34.9
VMungo0647G0768 Vigna mungo HOM05D004894 ORTHO05D005689 2.1e-15 86.7 186 30.6
VMungo0720G2185 Vigna mungo HOM05D004894 ORTHO05D005689 4.7e-15 85.5 170 32.9
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 8.1e-15 84.7 173 32.4
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 4.0e-14 82.4 176 30.7
Medtr6g037820 Medicago truncatula HOM05D004894 ORTHO05D005689 6.8e-14 81.6 181 33.1
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 8.9e-14 81.3 166 30.1
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 1.5e-13 80.5 176 33.5
Lalb_Chr02g0141491 Lupinus albus HOM05D004894 ORTHO05D005689 3.4e-13 79.3 179 33.5
Psat3g039600 Pisum sativum HOM05D004894 ORTHO05D005689 3.7e-12 75.9 182 30.8
TPR.G36461 Trifolium pratense HOM05D004894 ORTHO05D005689 3.7e-12 75.9 122 35.2
Medtr1g098430 Medicago truncatula HOM05D004894 ORTHO05D005689 8.4e-12 74.7 122 31.1
Medtr6g034580 Medicago truncatula HOM05D004894 ORTHO05D005689 8.4e-12 74.7 181 33.7
arahy.Tifrunner.gnm1.ann1.56TCJ2 Arachis hypogaea HOM05D004894 ORTHO05D005689 1.4e-11 73.9 181 28.7
Glyma.02G262600 Glycine max HOM05D004894 ORTHO05D005689 1.9e-11 73.6 174 30.5
Glyma.02G262800 Glycine max HOM05D004894 ORTHO05D005689 1.9e-11 73.6 174 30.5
Glyma.02G262900 Glycine max HOM05D004894 ORTHO05D005689 1.9e-11 73.6 174 30.5
Glyma.02G263000 Glycine max HOM05D004894 ORTHO05D005689 1.9e-11 73.6 174 30.5
Glyma.02G263100 Glycine max HOM05D004894 ORTHO05D005689 2.4e-11 73.2 176 29.5
Medtr6g037800 Medicago truncatula HOM05D004894 ORTHO05D005689 2.4e-11 73.2 162 34.6
Cfa018298 Carpinus fangiana HOM05D004894 ORTHO05D005689 3.2e-11 72.8 170 30.6
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 5.4e-11 72.0 150 32.7
Medtr6g037780 Medicago truncatula HOM05D004894 ORTHO05D005689 9.2e-11 71.2 179 31.8
CiPaw.16G009500 Carya illinoinensis HOM05D004894 ORTHO05D005689 2.7e-10 69.7 177 26.6
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 3.5e-10 69.3 182 30.2
Medtr1g055290 Medicago truncatula HOM05D004894 ORTHO05D005689 1.0e-09 67.8 181 32.6
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 1.7e-09 67.0 122 29.5
TPR.G36147 Trifolium pratense HOM05D004894 ORTHO05D005689 3.0e-09 66.2 158 32.9
Glyma.14G020900 Glycine max HOM05D004894 ORTHO05D005689 5.1e-09 65.5 143 32.2
TPR.G21506 Trifolium pratense HOM05D004894 ORTHO05D005689 5.1e-09 65.5 157 32.5
Lalb_Chr03g0035441 Lupinus albus HOM05D004894 ORTHO05D005689 6.6e-09 65.1 190 32.1
Glyma.14G020600 Glycine max HOM05D004894 ORTHO05D005689 1.1e-08 64.3 142 31.7
Medtr4g036790 Medicago truncatula HOM05D004894 ORTHO05D005689 1.5e-08 63.9 180 33.9
TPR.G14498 Trifolium pratense HOM05D004894 ORTHO05D005689 1.2e-07 60.8 174 31.6
Lalb_Chr14g0362601 Lupinus albus HOM05D004894 ORTHO05D005689 2.1e-07 60.1 107 35.5
FAN27G2788 Fragaria x ananassa HOM05D004894 ORTHO05D009560 1.4e-06 57.4 134 30.6
Lalb_Chr15g0089571 Lupinus albus HOM05D004894 ORTHO05D005689 5.2e-06 55.5 189 28.0


User provided reference genes

Program Settings