Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g064210 Medicago truncatula HOM05D004998 ORTHO05D006104 2.8e-28 127.9 64 100.0
Phvul.L006843 Phaseolus vulgaris HOM05D004998 ORTHO05D006104 5.4e-11 70.5 56 62.5
VMungo1080G1028 Vigna mungo HOM05D004998 ORTHO05D006104 2.0e-10 68.6 56 60.7
Lj3g0014072 Lotus japonicus HOM05D004998 ORTHO05D006104 6.0e-10 67.0 56 58.9
Lalb_Chr03g0026531 Lupinus albus HOM05D004998 ORTHO05D006104 6.0e-10 67.0 56 62.5
Glyma.15G036800 Glycine max HOM05D004998 ORTHO05D006104 1.7e-09 65.5 56 57.1
Oeu002429.1 Olea europaea HOM05D004998 ORTHO05D006104 3.0e-09 64.7 59 54.2
Medtr2g097480 Medicago truncatula HOM05D004998 ORTHO05D006104 3.9e-09 64.3 56 55.4
CiPaw.13G091800 Carya illinoinensis HOM05D004998 ORTHO05D006104 1.1e-08 62.8 52 53.8
Glyma.13G337700 Glycine max HOM05D004998 ORTHO05D006104 1.1e-08 62.8 56 55.4
Psat5g285160 Pisum sativum HOM05D004998 ORTHO05D006104 1.1e-08 62.8 56 55.4
TPR.G5593 Trifolium pratense HOM05D004998 ORTHO05D006104 1.1e-08 62.8 56 55.4
arahy.Tifrunner.gnm1.ann1.AD2TJP Arachis hypogaea HOM05D004998 ORTHO05D006104 1.5e-08 62.4 56 55.4
arahy.Tifrunner.gnm1.ann1.JSTV8M Arachis hypogaea HOM05D004998 ORTHO05D006104 1.5e-08 62.4 56 55.4
PGR102G0830 Punica granatum HOM05D004998 ORTHO05D006104 1.2e-07 59.3 54 51.9
Lj1A149T62 Lonicera japonica HOM05D004998 ORTHO05D006104 2.1e-07 58.5 56 51.8
SEGI_30466 Sequoiadendron giganteum HOM05D004998 ORTHO05D006104 2.1e-07 58.5 37 67.6
MELO3C025903.2 Cucumis melo HOM05D004998 ORTHO05D006104 2.8e-07 58.2 56 57.1
Peaxi162Scf00122g01415 Petunia axillaris HOM05D004998 ORTHO05D006104 2.8e-07 58.2 36 66.7
Cfa011521 Carpinus fangiana HOM05D004998 ORTHO05D006104 3.6e-07 57.8 52 51.9
CsaV3_6G016720 Cucumis sativus L. HOM05D004998 ORTHO05D006104 3.6e-07 57.8 56 57.1
HPP92_006623 Vanilla planifolia HOM05D004998 ORTHO05D006104 3.6e-07 57.8 51 54.9
ClCG02G020020 Citrullus lanatus HOM05D004998 ORTHO05D006104 4.7e-07 57.4 32 81.2
Nn2g11147 Nelumbo nucifera HOM05D004998 ORTHO05D006104 8.1e-07 56.6 48 52.1
Haze_24126 Corylus avellana HOM05D004998 ORTHO05D006104 1.4e-06 55.8 50 52.0
QL01p031100 Quercus lobata HOM05D004998 ORTHO05D006104 1.4e-06 55.8 52 48.1
Actinidia34418 Actinidia chinensis HOM05D004998 ORTHO05D006104 1.8e-06 55.5 32 75.0
ATR0559G067 Amborella trichopoda HOM05D004998 ORTHO05D006104 1.8e-06 55.5 50 52.0
MBI14_g12121_MAGBIO Magnolia biondii HOM05D004998 ORTHO05D006104 1.8e-06 55.5 55 52.7
CSS0032367 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 2.3e-06 55.1 49 55.1
GSVIVG01024930001 Vitis vinifera HOM05D004998 ORTHO05D006104 3.1e-06 54.7 50 56.0
Actinidia23927 Actinidia chinensis HOM05D004998 ORTHO05D006104 4.0e-06 54.3 32 71.9
Migut.D02075 Erythranthe guttata HOM05D004998 ORTHO05D006104 4.0e-06 54.3 53 47.2
Solyc06g005600.3 Solanum lycopersicum HOM05D004998 ORTHO05D006104 4.0e-06 54.3 32 68.8
Sopen06g001560 Solanum pennellii HOM05D004998 ORTHO05D006104 4.0e-06 54.3 32 68.8
PGSC0003DMG400002149 Solanum tuberosum HOM05D004998 ORTHO05D006104 4.0e-06 54.3 32 68.8
EL10Ac7g16043 Beta vulgaris HOM05D004998 ORTHO05D006104 5.2e-06 53.9 33 66.7
Dinv06259 Davidia involucrata HOM05D004998 ORTHO05D006104 5.2e-06 53.9 59 45.8
Dinv17028 Davidia involucrata HOM05D004998 ORTHO05D006104 5.2e-06 53.9 56 48.2
Dinv42976 Davidia involucrata HOM05D004998 ORTHO05D006104 5.2e-06 53.9 56 48.2
Dinv43123 Davidia involucrata HOM05D004998 ORTHO05D006104 5.2e-06 53.9 56 48.2
Rhsim13G0078800 Rhododendron simsii HOM05D004998 ORTHO05D006104 5.2e-06 53.9 34 70.6
SalBow3G1756 Salvia bowleyana HOM05D004998 ORTHO05D006104 5.2e-06 53.9 54 48.1
Ah.08g219770 Amaranthus hybridus HOM05D004998 ORTHO05D006104 6.8e-06 53.5 43 55.8
CANSAT54G1321 Cannabis sativa HOM05D004998 ORTHO05D006104 6.8e-06 53.5 41 63.4
MD11G1097800 Malus domestica HOM05D004998 ORTHO05D006104 6.8e-06 53.5 56 51.8
COL.COLO4_18543 Corchorus olitorius HOM05D004998 ORTHO05D006104 8.9e-06 53.1 38 60.5
Nn2g13381 Nelumbo nucifera HOM05D004998 ORTHO05D006104 8.9e-06 53.1 53 50.9


User provided reference genes

Program Settings