Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g059910 Medicago truncatula HOM05D002824 ORTHO05D007162 1.2e-74 283.1 142 100.0
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 2.7e-47 192.2 134 78.4
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 2.0e-45 186.0 141 70.9
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 5.7e-45 184.5 141 68.8
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 1.7e-44 183.0 104 85.6
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 1.7e-44 183.0 141 70.2
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 1.7e-44 183.0 104 85.6
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 1.7e-44 183.0 104 85.6
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 3.7e-44 181.8 107 82.2
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 3.7e-44 181.8 107 82.2
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 3.7e-44 181.8 107 82.2
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 3.7e-44 181.8 141 68.8
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 3.7e-44 181.8 141 68.8
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 4.8e-44 181.4 104 85.6
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 1.1e-43 180.3 107 81.3
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 1.1e-43 180.3 107 81.3
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 1.1e-43 180.3 107 81.3
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 1.1e-43 180.3 107 81.3
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 1.1e-43 180.3 107 81.3
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 1.4e-43 179.9 107 81.3
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 1.4e-43 179.9 107 81.3
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 1.8e-43 179.5 101 88.1
Gohir.A05G396400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.1e-43 178.3 107 81.3
Gohir.D11G307000 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.1e-43 178.3 107 82.2
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 4.1e-43 178.3 104 82.7
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 4.1e-43 178.3 104 82.7
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 4.1e-43 178.3 104 82.7
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 4.1e-43 178.3 104 82.7
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 4.1e-43 178.3 104 82.7
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 4.1e-43 178.3 104 82.7
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 4.1e-43 178.3 104 82.7
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 5.3e-43 177.9 107 81.3
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 5.3e-43 177.9 107 80.4
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 5.3e-43 177.9 107 82.2
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 5.3e-43 177.9 107 82.2
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 6.9e-43 177.6 104 83.7
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 1.2e-42 176.8 107 80.4
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 1.5e-42 176.4 104 82.7
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 2.6e-42 175.6 141 67.4
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 2.6e-42 175.6 104 83.7
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 4.5e-42 174.9 104 80.8
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.9e-41 172.2 107 79.4
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 2.9e-41 172.2 104 82.7
HanXRQChr11g0345281 Helianthus annuus HOM05D002824 ORTHO05D007162 1.4e-40 169.9 104 78.8
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 3.2e-40 168.7 104 80.8
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 4.2e-40 168.3 104 81.7
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 5.5e-40 167.9 104 82.7
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 1.4e-38 163.3 141 65.2
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 1.8e-38 162.9 96 85.4
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 5.2e-38 161.4 107 75.7
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.8e-36 154.8 94 81.9
Gohir.A12G228400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.2e-36 154.1 91 81.3
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-34 149.4 100 77.0
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 3.5e-34 148.7 91 80.2
Lsat_1_v5_gn_1_116300 Lactuca sativa HOM05D002824 ORTHO05D007162 1.7e-33 146.4 102 73.5
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 6.5e-33 144.4 98 76.5
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 8.5e-33 144.1 118 65.3
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.9e-32 142.9 118 64.4
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 2.1e-31 139.4 83 83.1
Gorai.005G065900 Gossypium raimondii HOM05D002824 ORTHO05D007162 2.7e-31 139.0 105 68.6
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 2.7e-31 139.0 94 74.5
SEGI_33981 Sequoiadendron giganteum HOM05D002824 ORTHO05D007162 7.0e-27 124.4 103 62.1
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.9e-26 121.3 86 73.3
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 7.7e-26 120.9 72 80.6
Phvul.001G158000 Phaseolus vulgaris HOM05D002824 ORTHO05D007162 3.2e-24 115.5 70 81.4
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 4.0e-22 108.6 68 79.4
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 1.7e-20 103.2 64 79.7
EL10As15g24111 Beta vulgaris HOM05D002824 ORTHO05D007162 8.3e-20 100.9 91 56.0
Medtr3g035490 Medicago truncatula HOM05D001133 ORTHO05D000941 5.4e-19 98.2 52 92.3
Thhalv10027382m.g Eutrema salsugineum HOM05D002824 ORTHO05D007162 2.7e-18 95.9 61 77.0
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 3.5e-18 95.5 63 77.8
C09p46990 Brassica napus HOM05D002824 ORTHO05D007162 7.7e-18 94.4 56 82.1
Nitab4.5_0020737g0030 Nicotiana tabacum HOM05D002824 ORTHO05D007162 1.3e-17 93.6 68 69.1
Nitab4.5_0000173g0110 Nicotiana tabacum HOM05D002824 ORTHO05D007162 3.8e-17 92.0 56 80.4
Gohir.D08G062280 Gossypium hirsutum HOM05D002824 ORTHO05D007162 5.0e-17 91.7 107 52.3
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea HOM05D002824 ORTHO05D007162 8.6e-17 90.9 61 78.7
Gohir.D08G194656 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.9e-16 89.7 141 43.3
SMO086G0055 Selaginella moellendorffii HOM05D002824 ORTHO05D007162 2.5e-16 89.4 104 47.1
Lalb_Chr20g0114531 Lupinus albus HOM05D002824 ORTHO05D007162 2.2e-12 76.3 78 56.4
Gorai.013G136400 Gossypium raimondii HOM05D002824 ORTHO05D007162 8.3e-12 74.3 44 81.8
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 1.8e-11 73.2 51 74.5
MBI05_g05353_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D007162 7.8e-10 67.8 48 68.8
Hund08020 Selenicereus undatus HOM05D002824 ORTHO05D007162 7.8e-10 67.8 75 53.3
Gohir.D13G121750 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.0e-09 67.4 50 68.0
Gohir.A08G063166 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.7e-07 58.5 66 51.5
Nitab4.5_0000173g0100 Nicotiana tabacum HOM05D000964 ORTHO05D001488 1.0e-06 57.4 29 89.7
BolSC56t61248H Brassica oleracea HOM05D002824 ORTHO05D007162 2.3e-06 56.2 32 81.2
BraSC59t46570Z Brassica rapa HOM05D002824 ORTHO05D007162 2.3e-06 56.2 32 81.2
MELO3C027652.2 Cucumis melo HOM05D002824 ORTHO05D007162 2.3e-06 56.2 68 51.5


User provided reference genes

Program Settings