Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 4.5e-65 251.1 128 100.0
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 2.6e-49 198.7 140 72.1
TPR.G21773 Trifolium pratense HOM05D006722 ORTHO05D007944 1.8e-34 149.4 117 67.5
Ca_05301_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 7.2e-31 137.5 135 60.0
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 4.4e-28 128.3 134 56.7
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 1.7e-27 126.3 115 62.6
Lalb_Chr19g0135361 Lupinus albus HOM05D006722 ORTHO05D007944 1.7e-27 126.3 128 58.6
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 8.2e-27 124.0 110 60.9
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 1.2e-25 120.2 137 53.3
Phvul.011G113200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 4.5e-25 118.2 160 46.9
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 5.5e-23 111.3 121 53.7
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 1.6e-22 109.8 135 51.1
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 5.2e-21 104.8 133 54.1
VMungo1080G0484 Vigna mungo HOM05D006722 ORTHO05D007944 1.1e-20 103.6 129 50.4
Psat0s3526g0040 Pisum sativum HOM05D006722 ORTHO05D007944 5.7e-20 101.3 128 50.0
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 7.4e-20 100.9 108 55.6
Psat5g270720 Pisum sativum HOM05D006722 ORTHO05D007944 2.2e-19 99.4 138 46.4
Ca_01515_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 1.1e-18 97.1 134 50.0
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 5.3e-18 94.7 110 50.9
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 9.1e-18 94.0 116 48.3
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 2.0e-17 92.8 113 49.6
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 2.0e-17 92.8 121 50.4
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 4.5e-17 91.7 112 47.3
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 1.7e-16 89.7 104 52.9
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 2.9e-16 89.0 119 47.9
Phvul.005G106200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 3.8e-16 88.6 166 40.4
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 8.5e-16 87.4 129 46.5
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 1.9e-15 86.3 115 46.1
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 4.2e-15 85.1 107 49.5
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 5.5e-15 84.7 125 44.0
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 7.2e-15 84.3 108 48.1
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 1.2e-14 83.6 141 42.6
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.4e-13 80.1 135 43.7
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 2.3e-13 79.3 120 44.2
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 2.3e-13 79.3 120 44.2
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 2.3e-13 79.3 116 45.7
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 2.3e-13 79.3 116 45.7
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 2.3e-13 79.3 116 45.7
Manes.13G149300 Manihot esculenta HOM05D006722 ORTHO05D007944 2.3e-13 79.3 129 42.6
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 2.3e-13 79.3 121 43.8
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 4.0e-13 78.6 115 44.3
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 3.4e-12 75.5 111 44.1
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 5.7e-12 74.7 148 36.5
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 9.8e-12 73.9 137 39.4
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 8.3e-11 70.9 120 44.2
ClCG02G017440 Citrullus lanatus HOM05D006722 ORTHO05D007944 1.8e-10 69.7 109 40.4
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 1.8e-10 69.7 122 41.8
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 2.4e-10 69.3 140 35.7
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 2.4e-10 69.3 114 42.1
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 5.4e-10 68.2 138 36.2
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.2e-09 67.0 104 43.3
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.2e-09 67.0 129 38.8
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 1.2e-09 67.0 121 40.5
Gohir.D06G117266 Gossypium hirsutum HOM05D006722 ORTHO05D007944 5.9e-09 64.7 112 40.2
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 7.7e-09 64.3 122 36.9
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 1.0e-08 63.9 113 42.5
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 2.2e-08 62.8 118 38.1
Gohir.D01G197650 Gossypium hirsutum HOM05D006722 ORTHO05D007944 3.8e-08 62.0 112 39.3
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 5.0e-08 61.6 127 33.9
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 6.5e-08 61.2 128 37.5
Hma1.2p1_0875F.1_g231430 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 6.5e-08 61.2 89 46.1
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 6.5e-08 61.2 135 37.8
Actinidia09877 Actinidia chinensis HOM05D006722 ORTHO05D007944 1.5e-07 60.1 135 34.1
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 1.5e-07 60.1 109 39.4
BcaC07g41191 Brassica carinata HOM05D006722 ORTHO05D007944 2.5e-07 59.3 117 34.2
C08p41970 Brassica napus HOM05D006722 ORTHO05D007944 2.5e-07 59.3 117 34.2
BolC8t51760H Brassica oleracea HOM05D006722 ORTHO05D007944 2.5e-07 59.3 117 34.2
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 3.2e-07 58.9 118 39.0
AT2G20870 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 7.2e-07 57.8 125 32.0
BraA09t41254Z Brassica rapa HOM05D006722 ORTHO05D007944 7.2e-07 57.8 117 32.5
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 7.2e-07 57.8 117 33.3
A09p58680 Brassica napus HOM05D006722 ORTHO05D007944 9.4e-07 57.4 117 32.5
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 1.2e-06 57.0 124 31.5
BcaB08g34945 Brassica carinata HOM05D006722 ORTHO05D007944 1.2e-06 57.0 117 33.3
DCAR_023670 Daucus carota HOM05D006722 ORTHO05D007944 2.1e-06 56.2 126 38.9
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 2.7e-06 55.8 83 45.8
Cpa.g.sc34.125 Carica papaya HOM05D006722 ORTHO05D007944 3.6e-06 55.5 38 68.4
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 3.6e-06 55.5 117 34.2
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 6.1e-06 54.7 119 37.0
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 8.0e-06 54.3 125 32.8
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 8.0e-06 54.3 105 36.2
Lsat_1_v5_gn_4_70120 Lactuca sativa HOM05D006722 ORTHO05D007944 8.0e-06 54.3 137 35.0
PGSC0003DMG400018315 Solanum tuberosum HOM05D006722 ORTHO05D007944 8.0e-06 54.3 128 36.7


User provided reference genes

Program Settings