Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g035845 Medicago truncatula HOM05D000158 ORTHO05D001651 1.2e-118 429.9 212 100.0
Medtr5g068980 Medicago truncatula HOM05D000158 ORTHO05D001651 2.1e-83 312.8 193 81.9
TPR.G32354 Trifolium pratense HOM05D000158 ORTHO05D001651 2.7e-22 109.8 67 73.1
Medtr1g043440 Medicago truncatula HOM05D000593 ORTHO05D004526 1.4e-18 97.4 75 68.0
Medtr4g120790 Medicago truncatula HOM05D000593 ORTHO05D004526 3.0e-18 96.3 51 90.2
Medtr4g100470 Medicago truncatula HOM05D000593 ORTHO05D004526 2.6e-17 93.2 51 90.2
Glyma.02G164000 Glycine max HOM05D000158 ORTHO05D001651 1.6e-14 84.0 71 49.3
Medtr0599s0020 Medicago truncatula HOM05D007688 ORTHO05D004526 2.7e-14 83.2 55 78.2
Medtr3g034840 Medicago truncatula HOM05D007688 ORTHO05D004526 2.7e-14 83.2 55 78.2
Glyma.01G087200 Glycine max HOM05D000158 ORTHO05D001651 3.5e-14 82.8 71 47.9
Glyma.09G079300 Glycine max HOM05D000158 ORTHO05D001651 3.5e-14 82.8 71 47.9
Glyma.05G086300 Glycine max HOM05D000158 ORTHO05D001651 5.9e-14 82.0 71 47.9
arahy.Tifrunner.gnm1.ann1.UD6UQ7 Arachis hypogaea HOM05D000158 ORTHO05D001651 1.5e-12 77.4 71 43.7
Glyma.01G067400 Glycine max HOM05D000158 ORTHO05D001651 1.5e-12 77.4 68 45.6
arahy.Tifrunner.gnm1.ann1.3JH9SV Arachis hypogaea HOM05D000158 ORTHO05D001651 2.5e-12 76.6 66 42.4
arahy.Tifrunner.gnm1.ann1.7AD5C9 Arachis hypogaea HOM05D000158 ORTHO05D001651 4.3e-12 75.9 67 41.8
Medtr2g027000 Medicago truncatula HOM05D007688 ORTHO05D004526 4.3e-12 75.9 57 75.4
Glyma.06G274600 Glycine max HOM05D000158 ORTHO05D001651 5.6e-12 75.5 71 46.5
arahy.Tifrunner.gnm1.ann1.36PX7W Arachis hypogaea HOM05D000158 ORTHO05D001651 7.3e-12 75.1 67 43.3
arahy.Tifrunner.gnm1.ann1.B6618T Arachis hypogaea HOM05D000158 ORTHO05D001651 7.3e-12 75.1 71 40.8
arahy.Tifrunner.gnm1.ann1.EB82CG Arachis hypogaea HOM05D000158 ORTHO05D001651 7.3e-12 75.1 67 43.3
arahy.Tifrunner.gnm1.ann1.F56KYL Arachis hypogaea HOM05D000158 ORTHO05D001651 7.3e-12 75.1 71 40.8
arahy.Tifrunner.gnm1.ann1.IZN6QE Arachis hypogaea HOM05D000158 ORTHO05D001651 7.3e-12 75.1 67 43.3
arahy.Tifrunner.gnm1.ann1.FX7YCE Arachis hypogaea HOM05D000158 ORTHO05D000197 9.5e-12 74.7 67 41.8
arahy.Tifrunner.gnm1.ann1.JQ4SFM Arachis hypogaea HOM05D000158 ORTHO05D001651 9.5e-12 74.7 67 41.8
arahy.Tifrunner.gnm1.ann1.NZ73MH Arachis hypogaea HOM05D000158 ORTHO05D000197 9.5e-12 74.7 67 41.8
arahy.Tifrunner.gnm1.ann1.VCIQ09 Arachis hypogaea HOM05D000158 ORTHO05D001651 9.5e-12 74.7 67 41.8
arahy.Tifrunner.gnm1.ann1.8778WX Arachis hypogaea HOM05D000158 ORTHO05D001651 1.2e-11 74.3 67 41.8
arahy.Tifrunner.gnm1.ann1.HEB9RX Arachis hypogaea HOM05D000158 ORTHO05D001651 1.2e-11 74.3 67 41.8
arahy.Tifrunner.gnm1.ann1.QI14Z6 Arachis hypogaea HOM05D000158 ORTHO05D001651 1.2e-11 74.3 61 44.3
arahy.Tifrunner.gnm1.ann1.QTA153 Arachis hypogaea HOM05D000158 ORTHO05D001651 1.6e-11 73.9 63 44.4
arahy.Tifrunner.gnm1.ann1.390B12 Arachis hypogaea HOM05D000158 ORTHO05D000197 2.1e-11 73.6 67 41.8
arahy.Tifrunner.gnm1.ann1.JB5G6S Arachis hypogaea HOM05D000158 ORTHO05D000197 2.1e-11 73.6 67 41.8
arahy.Tifrunner.gnm1.ann1.NMX4R1 Arachis hypogaea HOM05D000158 ORTHO05D001651 2.1e-11 73.6 71 39.4
arahy.Tifrunner.gnm1.ann1.57V53W Arachis hypogaea HOM05D000158 ORTHO05D001651 2.8e-11 73.2 64 43.8
arahy.Tifrunner.gnm1.ann1.5R798I Arachis hypogaea HOM05D000158 ORTHO05D001651 2.8e-11 73.2 67 41.8
arahy.Tifrunner.gnm1.ann1.70M392 Arachis hypogaea HOM05D000158 ORTHO05D001651 2.8e-11 73.2 67 41.8
arahy.Tifrunner.gnm1.ann1.BCFP52 Arachis hypogaea HOM05D000158 ORTHO05D000197 2.8e-11 73.2 67 41.8
arahy.Tifrunner.gnm1.ann1.C0CXNP Arachis hypogaea HOM05D000158 ORTHO05D001651 2.8e-11 73.2 67 41.8
arahy.Tifrunner.gnm1.ann1.N9660C Arachis hypogaea HOM05D000158 ORTHO05D000197 2.8e-11 73.2 67 41.8
arahy.Tifrunner.gnm1.ann1.RY0Z86 Arachis hypogaea HOM05D000158 ORTHO05D001651 2.8e-11 73.2 67 41.8
arahy.Tifrunner.gnm1.ann1.XF3T5B Arachis hypogaea HOM05D000158 ORTHO05D000197 2.8e-11 73.2 67 41.8
arahy.Tifrunner.gnm1.ann1.CPST4T Arachis hypogaea HOM05D000158 ORTHO05D001651 3.6e-11 72.8 66 43.9
arahy.Tifrunner.gnm1.ann1.580H8T Arachis hypogaea HOM05D000158 ORTHO05D001651 6.1e-11 72.0 67 40.3
arahy.Tifrunner.gnm1.ann1.E4NK8R Arachis hypogaea HOM05D000158 ORTHO05D001651 6.1e-11 72.0 67 41.8
Glyma.20G030000 Glycine max HOM05D000158 ORTHO05D001651 6.1e-11 72.0 71 38.0
arahy.Tifrunner.gnm1.ann1.M290N6 Arachis hypogaea HOM05D000158 ORTHO05D001651 8.0e-11 71.6 75 38.7
arahy.Tifrunner.gnm1.ann1.Q77YYM Arachis hypogaea HOM05D000158 ORTHO05D001651 8.0e-11 71.6 67 40.3
Glyma.05G072800 Glycine max HOM05D000158 ORTHO05D001651 8.0e-11 71.6 71 39.4
Glyma.05G073000 Glycine max HOM05D000158 ORTHO05D001651 8.0e-11 71.6 71 39.4
Glyma.06G226300 Glycine max HOM05D000158 ORTHO05D001651 8.0e-11 71.6 71 39.4
Glyma.09G151100 Glycine max HOM05D000158 ORTHO05D001651 8.0e-11 71.6 71 39.4
Glyma.12G108700 Glycine max HOM05D000158 ORTHO05D001651 8.0e-11 71.6 71 39.4
Glyma.12G108800 Glycine max HOM05D000158 ORTHO05D001651 8.0e-11 71.6 71 39.4
Glyma.15G204900 Glycine max HOM05D000158 ORTHO05D001651 8.0e-11 71.6 71 39.4
Glyma.17G210600 Glycine max HOM05D000158 ORTHO05D001651 8.0e-11 71.6 67 43.3
arahy.Tifrunner.gnm1.ann1.QZ91BD Arachis hypogaea HOM05D000158 ORTHO05D001651 1.0e-10 71.2 67 40.3
Glyma.05G072700 Glycine max HOM05D000158 ORTHO05D001651 1.0e-10 71.2 71 39.4
Glyma.06G226100 Glycine max HOM05D000158 ORTHO05D001651 1.0e-10 71.2 71 39.4
Glyma.08G277500 Glycine max HOM05D000158 ORTHO05D001651 1.0e-10 71.2 71 39.4
Glyma.09G081200 Glycine max HOM05D000158 ORTHO05D001651 1.0e-10 71.2 71 39.4
Glyma.12G108750 Glycine max HOM05D000158 ORTHO05D001651 1.0e-10 71.2 71 39.4
Glyma.20G037300 Glycine max HOM05D000158 ORTHO05D001651 1.0e-10 71.2 71 39.4
Glyma.01G103900 Glycine max HOM05D000158 ORTHO05D001651 1.4e-10 70.9 67 40.3
Glyma.13G028700 Glycine max HOM05D000158 ORTHO05D001651 1.4e-10 70.9 71 39.4
Glyma.19G068200 Glycine max HOM05D000158 ORTHO05D001651 1.4e-10 70.9 71 39.4
arahy.Tifrunner.gnm1.ann1.NH35X9 Arachis hypogaea HOM05D000158 ORTHO05D001651 1.8e-10 70.5 71 42.3
Glyma.07G145200 Glycine max HOM05D000158 ORTHO05D001651 1.8e-10 70.5 71 36.6
Glyma.15G177300 Glycine max HOM05D000158 ORTHO05D000197 1.8e-10 70.5 71 38.0
arahy.Tifrunner.gnm1.ann1.1XX62H Arachis hypogaea HOM05D000158 ORTHO05D001651 2.3e-10 70.1 67 40.3
arahy.Tifrunner.gnm1.ann1.88WVD3 Arachis hypogaea HOM05D000158 ORTHO05D001651 2.3e-10 70.1 71 39.4
arahy.Tifrunner.gnm1.ann1.BSH03F Arachis hypogaea HOM05D000158 ORTHO05D001651 2.3e-10 70.1 71 39.4
arahy.Tifrunner.gnm1.ann1.DILN7M Arachis hypogaea HOM05D000158 ORTHO05D000197 2.3e-10 70.1 71 39.4
arahy.Tifrunner.gnm1.ann1.K985UN Arachis hypogaea HOM05D000158 ORTHO05D000197 2.3e-10 70.1 71 39.4
arahy.Tifrunner.gnm1.ann1.PNX89E Arachis hypogaea HOM05D000158 ORTHO05D000197 2.3e-10 70.1 71 39.4
arahy.Tifrunner.gnm1.ann1.QFB33Z Arachis hypogaea HOM05D000158 ORTHO05D000197 2.3e-10 70.1 71 39.4
arahy.Tifrunner.gnm1.ann1.QR4X03 Arachis hypogaea HOM05D000158 ORTHO05D001651 2.3e-10 70.1 67 40.3
arahy.Tifrunner.gnm1.ann1.XS500A Arachis hypogaea HOM05D000158 ORTHO05D001651 2.3e-10 70.1 71 43.7
arahy.Tifrunner.gnm1.ann1.YKB7VN Arachis hypogaea HOM05D000158 ORTHO05D000197 2.3e-10 70.1 71 39.4
Glyma.06G289100 Glycine max HOM05D000158 ORTHO05D001651 2.3e-10 70.1 64 43.8
Glyma.09G086300 Glycine max HOM05D000158 ORTHO05D001651 2.3e-10 70.1 71 38.0
Glyma.09G086400 Glycine max HOM05D000158 ORTHO05D001651 2.3e-10 70.1 71 38.0
Glyma.19G068100 Glycine max HOM05D000158 ORTHO05D001651 2.3e-10 70.1 71 39.4
arahy.Tifrunner.gnm1.ann1.44H41D Arachis hypogaea HOM05D000158 ORTHO05D000197 3.0e-10 69.7 67 40.3
arahy.Tifrunner.gnm1.ann1.B0GSRU Arachis hypogaea HOM05D000158 ORTHO05D001651 3.0e-10 69.7 89 38.2
arahy.Tifrunner.gnm1.ann1.UQ4A0Q Arachis hypogaea HOM05D000158 ORTHO05D000197 3.0e-10 69.7 71 39.4
Glyma.11G160700 Glycine max HOM05D000158 ORTHO05D001651 3.0e-10 69.7 65 41.5
arahy.Tifrunner.gnm1.ann1.MA1WTI Arachis hypogaea HOM05D000158 ORTHO05D001651 4.0e-10 69.3 71 42.3
Glyma.19G100400 Glycine max HOM05D000158 ORTHO05D001651 4.0e-10 69.3 71 38.0
arahy.Tifrunner.gnm1.ann1.LBF2HU Arachis hypogaea HOM05D000158 ORTHO05D001651 5.2e-10 68.9 71 38.0
Lj5g0021917 Lotus japonicus HOM05D000158 ORTHO05D001651 6.8e-10 68.6 66 47.0
LjContig00408g0026416 Lotus japonicus HOM05D000158 ORTHO05D000197 6.8e-10 68.6 64 48.4
arahy.Tifrunner.gnm1.ann1.1CR7W6 Arachis hypogaea HOM05D000158 ORTHO05D001651 8.9e-10 68.2 71 38.0
arahy.Tifrunner.gnm1.ann1.L849KL Arachis hypogaea HOM05D000158 ORTHO05D000197 8.9e-10 68.2 71 38.0
arahy.Tifrunner.gnm1.ann1.NZ0BB7 Arachis hypogaea HOM05D000158 ORTHO05D001651 8.9e-10 68.2 67 40.3
arahy.Tifrunner.gnm1.ann1.Y4Y8ET Arachis hypogaea HOM05D000158 ORTHO05D001651 8.9e-10 68.2 71 38.0
arahy.Tifrunner.gnm1.ann1.B8TUXN Arachis hypogaea HOM05D000158 ORTHO05D001651 1.2e-09 67.8 61 42.6
Glyma.15G218100 Glycine max HOM05D000158 ORTHO05D001651 1.2e-09 67.8 71 38.0
Glyma.04G122800 Glycine max HOM05D000158 ORTHO05D001651 1.5e-09 67.4 67 37.3
Glyma.20G057000 Glycine max HOM05D000158 ORTHO05D001651 1.5e-09 67.4 64 39.1
Lj2g0025940 Lotus japonicus HOM05D000158 ORTHO05D000197 1.5e-09 67.4 54 55.6
arahy.Tifrunner.gnm1.ann1.D3KQFI Arachis hypogaea HOM05D000158 ORTHO05D000197 2.0e-09 67.0 71 38.0
Lj1g0004876 Lotus japonicus HOM05D000158 ORTHO05D000197 2.0e-09 67.0 66 45.5
Lj1g0012427 Lotus japonicus HOM05D000158 ORTHO05D002858 2.0e-09 67.0 66 45.5
Lj3g0021112 Lotus japonicus HOM05D000158 ORTHO05D000197 2.0e-09 67.0 66 45.5
Lj4g0010253 Lotus japonicus HOM05D000158 ORTHO05D001651 2.0e-09 67.0 66 45.5
Lj4g0012100 Lotus japonicus HOM05D000158 ORTHO05D001651 2.0e-09 67.0 66 45.5
arahy.Tifrunner.gnm1.ann1.KB372Z Arachis hypogaea HOM05D000158 ORTHO05D000197 2.6e-09 66.6 71 36.6
Lj1g0016672 Lotus japonicus HOM05D000158 ORTHO05D000197 2.6e-09 66.6 54 51.9
arahy.Tifrunner.gnm1.ann1.95K0JB Arachis hypogaea HOM05D000158 ORTHO05D001651 3.4e-09 66.2 84 39.3
Lj2g0004387 Lotus japonicus HOM05D000158 ORTHO05D000197 3.4e-09 66.2 108 32.4
Glyma.19G053700 Glycine max HOM05D000158 ORTHO05D001651 5.7e-09 65.5 71 36.6
arahy.Tifrunner.gnm1.ann1.H0MY7H Arachis hypogaea HOM05D000158 ORTHO05D001651 7.5e-09 65.1 59 42.4
arahy.Tifrunner.gnm1.ann1.J91UE5 Arachis hypogaea HOM05D000158 ORTHO05D001651 7.5e-09 65.1 73 38.4
Lj4g0023820 Lotus japonicus HOM05D000158 ORTHO05D000197 7.5e-09 65.1 54 50.0
arahy.Tifrunner.gnm1.ann1.H03N3X Arachis hypogaea HOM05D000158 ORTHO05D001651 9.8e-09 64.7 71 36.6
arahy.Tifrunner.gnm1.ann1.FI399H Arachis hypogaea HOM05D000158 ORTHO05D001651 1.3e-08 64.3 62 43.5
arahy.Tifrunner.gnm1.ann1.5X2MV2 Arachis hypogaea HOM05D000158 ORTHO05D001651 1.7e-08 63.9 64 40.6
arahy.Tifrunner.gnm1.ann1.B92ZG9 Arachis hypogaea HOM05D000158 ORTHO05D001651 1.7e-08 63.9 60 41.7
arahy.Tifrunner.gnm1.ann1.BA8MPA Arachis hypogaea HOM05D000158 ORTHO05D001651 1.7e-08 63.9 56 46.4
Lj4g0023280 Lotus japonicus HOM05D000158 ORTHO05D000197 2.2e-08 63.5 54 48.1
arahy.Tifrunner.gnm1.ann1.C8LA1K Arachis hypogaea HOM05D000158 ORTHO05D001651 2.9e-08 63.2 68 41.2
arahy.Tifrunner.gnm1.ann1.FD48RC Arachis hypogaea HOM05D000158 ORTHO05D001651 2.9e-08 63.2 61 42.6
arahy.Tifrunner.gnm1.ann1.LIAR5B Arachis hypogaea HOM05D000158 ORTHO05D001651 2.9e-08 63.2 67 37.3
arahy.Tifrunner.gnm1.ann1.LLGK2E Arachis hypogaea HOM05D000158 ORTHO05D001651 2.9e-08 63.2 61 42.6
arahy.Tifrunner.gnm1.ann1.YV3MK7 Arachis hypogaea HOM05D034975 ORTHO05D001651 2.9e-08 63.2 88 40.9
LjContig00080g0019961 Lotus japonicus HOM05D000158 ORTHO05D000197 2.9e-08 63.2 54 48.1
arahy.Tifrunner.gnm1.ann1.7XT6FG Arachis hypogaea HOM05D000158 ORTHO05D001651 3.7e-08 62.8 56 44.6
arahy.Tifrunner.gnm1.ann1.EG66XE Arachis hypogaea HOM05D000158 ORTHO05D001651 3.7e-08 62.8 74 36.5
arahy.Tifrunner.gnm1.ann1.XMNF3Y Arachis hypogaea HOM05D000158 ORTHO05D001651 4.9e-08 62.4 61 41.0
arahy.Tifrunner.gnm1.ann1.P3SFGS Arachis hypogaea HOM05D000158 ORTHO05D001651 8.3e-08 61.6 52 48.1
arahy.Tifrunner.gnm1.ann1.7HTQ4L Arachis hypogaea HOM05D000158 ORTHO05D001651 1.1e-07 61.2 56 42.9
arahy.Tifrunner.gnm1.ann1.QNS4LJ Arachis hypogaea HOM05D000158 ORTHO05D001651 1.1e-07 61.2 71 36.6
arahy.Tifrunner.gnm1.ann1.R3MF3M Arachis hypogaea HOM05D000158 ORTHO05D001651 1.4e-07 60.8 61 39.3
Medtr7g034570 Medicago truncatula HOM05D007688 ORTHO05D004526 1.4e-07 60.8 50 70.0
arahy.Tifrunner.gnm1.ann1.ML98PJ Arachis hypogaea HOM05D000158 ORTHO05D001651 7.0e-07 58.5 64 37.5
arahy.Tifrunner.gnm1.ann1.CDRG1U Arachis hypogaea HOM05D000158 ORTHO05D000197 1.2e-06 57.8 51 43.1
arahy.Tifrunner.gnm1.ann1.EAQK8C Arachis hypogaea HOM05D000158 ORTHO05D001651 1.6e-06 57.4 61 42.6
arahy.Tifrunner.gnm1.ann1.EDK5BP Arachis hypogaea HOM05D000158 ORTHO05D001651 1.6e-06 57.4 120 30.8
arahy.Tifrunner.gnm1.ann1.MN53AH Arachis hypogaea HOM05D000158 ORTHO05D001651 1.6e-06 57.4 68 36.8
arahy.Tifrunner.gnm1.ann1.PD9AJT Arachis hypogaea HOM05D000158 ORTHO05D001651 1.6e-06 57.4 54 40.7
arahy.Tifrunner.gnm1.ann1.1691EG Arachis hypogaea HOM05D000158 ORTHO05D001651 4.6e-06 55.8 52 40.4


User provided reference genes

Program Settings