Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 2.8e-103 378.6 197 100.0
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 1.4e-57 226.9 175 71.4
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 4.0e-57 225.3 170 71.2
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 3.0e-44 182.6 177 59.9
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 2.4e-41 172.9 200 53.5
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 5.3e-41 171.8 179 55.9
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 4.5e-40 168.7 194 54.1
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 1.4e-38 163.7 194 50.0
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 2.5e-38 162.9 162 54.9
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 2.5e-38 162.9 195 49.2
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.2e-37 160.6 162 54.9
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.2e-37 160.6 162 54.9
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 2.1e-37 159.8 201 48.8
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 6.1e-37 158.3 185 50.8
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.3e-36 156.4 161 54.0
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 6.7e-36 154.8 136 58.8
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 6.7e-36 154.8 194 49.0
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 6.7e-36 154.8 154 55.2
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 8.7e-36 154.5 161 53.4
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 8.7e-36 154.5 162 53.7
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 1.5e-35 153.7 111 68.5
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 1.5e-35 153.7 186 50.0
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 1.5e-35 153.7 147 54.4
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 2.5e-35 152.9 170 52.9
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.5e-35 152.9 162 53.1
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 2.5e-35 152.9 172 52.3
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 4.3e-35 152.1 145 57.9
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 4.3e-35 152.1 194 50.0
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 1.3e-34 150.6 142 56.3
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 2.2e-34 149.8 190 47.4
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 2.8e-34 149.4 146 56.2
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 2.8e-34 149.4 164 50.0
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 3.7e-34 149.1 166 53.0
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 4.8e-34 148.7 108 64.8
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 4.8e-34 148.7 108 64.8
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 4.8e-34 148.7 139 56.8
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 8.2e-34 147.9 122 70.5
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 8.2e-34 147.9 108 63.9
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 8.2e-34 147.9 164 48.8
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 1.4e-33 147.1 187 47.6
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 4.1e-33 145.6 108 63.9
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 6.9e-33 144.8 194 44.8
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 3.4e-32 142.5 107 64.5
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 4.5e-32 142.1 169 48.5
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 5.9e-32 141.7 171 49.1
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 5.9e-32 141.7 185 47.6
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 5.9e-32 141.7 185 47.6
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 5.9e-32 141.7 185 47.6
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 5.9e-32 141.7 163 51.5
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 1.3e-31 140.6 140 52.9
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.7e-31 140.2 193 45.6
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 1.7e-31 140.2 171 46.8
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 2.9e-31 139.4 127 54.3
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 2.9e-31 139.4 109 63.3
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 2.9e-31 139.4 176 48.3
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 6.5e-31 138.3 111 58.6
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 8.5e-31 137.9 108 64.8
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 8.5e-31 137.9 178 46.6
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 8.5e-31 137.9 199 45.2
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 1.4e-30 137.1 185 46.5
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 1.9e-30 136.7 205 43.9
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 1.9e-30 136.7 136 54.4
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 1.9e-30 136.7 165 46.1
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 1.9e-30 136.7 182 46.2
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 3.2e-30 136.0 174 47.7
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 5.5e-30 135.2 108 60.2
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 5.5e-30 135.2 128 54.7
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 5.5e-30 135.2 112 58.0
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 2.1e-29 133.3 178 44.4
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 2.1e-29 133.3 110 54.5
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 6.1e-29 131.7 203 43.3
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.4e-28 130.6 110 51.8
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 1.8e-28 130.2 103 60.2
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 2.3e-28 129.8 183 45.4
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 3.0e-28 129.4 184 45.7
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 3.0e-28 129.4 204 42.2
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 3.0e-28 129.4 111 55.0
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 3.9e-28 129.0 188 44.1
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 3.9e-28 129.0 168 46.4
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 5.1e-28 128.6 191 43.5
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 1.1e-27 127.5 108 55.6
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 1.1e-27 127.5 194 43.8
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 1.7e-26 123.6 128 51.6
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 1.8e-25 120.2 87 66.7
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 3.1e-25 119.4 109 56.0
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 2.0e-24 116.7 180 41.7
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 5.9e-24 115.2 182 41.8
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 2.2e-23 113.2 101 49.5
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 1.9e-22 110.2 144 43.1
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 7.2e-22 108.2 136 43.4
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 7.4e-19 98.2 148 41.9
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 6.3e-18 95.1 178 33.1
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 1.1e-17 94.4 108 45.4
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 2.6e-16 89.7 108 48.1
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 1.7e-15 87.0 114 42.1
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 8.5e-15 84.7 132 38.6
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 9.4e-14 81.3 158 36.1
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 1.2e-13 80.9 53 67.9
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 3.6e-13 79.3 163 37.4
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 4.7e-13 79.0 79 53.2
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 1.4e-12 77.4 125 42.4
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 1.4e-12 77.4 125 42.4
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 2.8e-10 69.7 105 44.8
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 8.2e-10 68.2 42 66.7
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 1.1e-09 67.8 140 36.4
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.4e-09 66.6 60 53.3
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 3.5e-08 62.8 62 50.0


User provided reference genes

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