Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g028910 Medicago truncatula HOM05D018130 ORTHO05D017078 1.1e-256 889.4 450 100.0
Medtr8g070580 Medicago truncatula HOM05D018130 ORTHO05D017078 8.9e-60 235.3 434 39.6
TPR.G12444 Trifolium pratense HOM05D000017 ORTHO05D000013 2.1e-37 161.0 361 32.4
TPR.G39607 Trifolium pratense HOM05D000017 ORTHO05D017078 2.2e-26 124.4 295 32.5
TPR.G28212 Trifolium pratense HOM05D000017 ORTHO05D000013 1.1e-25 122.1 361 28.8
Ca_04121_v3 Cicer arietinum L. HOM05D008026 ORTHO05D011894 1.8e-20 104.8 284 28.9
Ca_26785_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 1.8e-20 104.8 184 35.9
Ca_12153_v3 Cicer arietinum L. HOM05D000017 ORTHO05D010612 2.4e-20 104.4 184 35.9
Ca_19677_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 9.0e-20 102.4 154 39.0
Ca_26364_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 1.5e-19 101.7 184 34.8
TPR.G35629 Trifolium pratense HOM05D000017 ORTHO05D000013 1.2e-16 92.0 270 30.7
Ca_20518_v3 Cicer arietinum L. HOM05D008026 ORTHO05D010612 3.9e-15 87.0 255 29.0
Ca_12200_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 3.3e-14 84.0 154 35.1
Ca_02376_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 2.6e-11 74.3 83 45.8
Hma1.2p1_0787F.1_g217970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.8e-11 73.2 186 30.1
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.8e-11 73.2 186 30.1
Medtr5g058575 Medicago truncatula HOM05D018130 ORTHO05D017078 1.0e-10 72.4 49 71.4
Ca_14314_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 2.9e-10 70.9 78 48.7
Hma1.2p1_1264F.1_g271275 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.9e-10 70.9 187 29.9
Medtr8g066265 Medicago truncatula HOM05D018130 ORTHO05D017078 6.5e-10 69.7 42 81.0
Medtr0005s0240 Medicago truncatula HOM05D010737 ORTHO05D017078 1.1e-09 68.9 44 75.0
Hma1.2p1_0014F.1_g010150 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.9e-09 68.2 317 25.9
FvH4_6g13324 Fragaria vesca HOM05D000017 ORTHO05D000013 5.5e-09 66.6 154 28.6
Medtr8g467130 Medicago truncatula HOM05D018130 ORTHO05D017078 1.2e-08 65.5 44 77.3
ECA234G1268 Erigeron canadensis HOM05D000017 ORTHO05D003113 1.6e-08 65.1 174 25.9
Ca_24002_v3 Cicer arietinum L. HOM05D008026 ORTHO05D010612 2.1e-08 64.7 105 36.2
Dinv06190 Davidia involucrata HOM05D000017 ORTHO05D000013 2.1e-08 64.7 176 29.5
Rhsim04G0059700 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.7e-08 64.3 144 29.9
Hma1.2p1_0561F.1_g178910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.6e-08 63.5 162 27.2
Rhsim13G0069300 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.6e-08 63.5 163 26.4
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.1e-08 63.2 191 26.7
TWI31G0311 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.1e-08 63.2 95 30.5
Medtr5g081480 Medicago truncatula HOM05D000017 ORTHO05D009934 7.9e-08 62.8 93 33.3
HanXRQChr05g0162391 Helianthus annuus HOM05D000017 ORTHO05D000013 1.0e-07 62.4 135 34.8
Medtr0009s0290 Medicago truncatula HOM05D018130 ORTHO05D017078 1.0e-07 62.4 43 72.1
TWI77G0979 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.0e-07 62.4 92 34.8
Rhsim08G0208800 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.8e-07 61.6 311 23.5
Atru.chr6.3056 Acer truncatum HOM05D000017 ORTHO05D000013 3.0e-07 60.8 280 22.5
TWI79G0005 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.0e-07 60.8 90 31.1
A04p20160 Brassica napus HOM05D000017 ORTHO05D000013 6.7e-07 59.7 159 27.7
Ca_13615_v3 Cicer arietinum L. HOM05D008773 ORTHO05D010496 8.7e-07 59.3 94 27.7
Rhsim02G0014700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.1e-06 58.9 158 25.9
TWI34G1997 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.1e-06 58.9 89 31.5
Medtr1g046450 Medicago truncatula HOM05D018130 ORTHO05D017078 1.5e-06 58.5 47 57.4
Rhsim02G0213500 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.5e-06 58.5 175 27.4
Rhsim01G0131900 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.9e-06 58.2 258 24.8
Hma1.2p1_3404F.1_g335820 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.5e-06 57.8 183 24.0
Medtr6g059380 Medicago truncatula HOM05D000291 ORTHO05D010447 2.5e-06 57.8 42 59.5
TWI53G0878 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.5e-06 57.8 269 24.5
TWI59G0255 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.5e-06 57.8 90 28.9
Hma1.2p1_1233F.1_g268990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.3e-06 57.4 196 23.5
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.3e-06 57.4 158 25.9
Hma1.2p1_0184F.1_g081220 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.3e-06 57.0 330 23.6
Medtr4g133395 Medicago truncatula HOM05D009496 ORTHO05D017078 4.3e-06 57.0 42 71.4
QL09p032027 Quercus lobata HOM05D000017 ORTHO05D000013 4.3e-06 57.0 115 28.7
CANSAT54G2672 Cannabis sativa HOM05D000017 ORTHO05D000013 5.7e-06 56.6 205 23.9
ECA236G3026 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.7e-06 56.6 162 29.0
RcHm_v2.0_Chr7g0223891 Rosa chinensis HOM05D000017 ORTHO05D000013 5.7e-06 56.6 309 22.0
Rhsim07G0202700 Rhododendron simsii HOM05D000017 ORTHO05D000013 9.7e-06 55.8 258 24.8


User provided reference genes

Program Settings