Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g026420 Medicago truncatula HOM05D001200 ORTHO05D009713 1.7e-47 192.2 89 100.0
Glyma.18G155300 Glycine max HOM05D001200 ORTHO05D009713 7.2e-14 80.5 77 53.2
Sed0023939 Sechium edule HOM05D001200 ORTHO05D009713 3.6e-13 78.2 75 54.7
CARHR258570 Cardamine hirsuta HOM05D001200 ORTHO05D009713 5.7e-11 70.9 38 84.2
TPR.G6643 Trifolium pratense HOM05D001044 ORTHO05D008486 9.8e-11 70.1 38 81.6
C09p40360 Brassica napus HOM05D001200 ORTHO05D009713 1.7e-10 69.3 48 68.8
BolC9t56924H Brassica oleracea HOM05D001200 ORTHO05D009713 1.7e-10 69.3 48 68.8
Gorai.004G082100 Gossypium raimondii HOM05D001200 ORTHO05D009713 1.7e-10 69.3 48 68.8
AL9U11952 Arabidopsis lyrata HOM05D001200 ORTHO05D009713 3.7e-10 68.2 38 81.6
C07p33440 Brassica napus HOM05D001200 ORTHO05D009713 3.7e-10 68.2 38 81.6
C09p24630 Brassica napus HOM05D001200 ORTHO05D009713 3.7e-10 68.2 38 81.6
C09p40200 Brassica napus HOM05D001200 ORTHO05D009713 3.7e-10 68.2 38 81.6
MELO3C027236.2 Cucumis melo HOM05D001200 ORTHO05D009713 3.7e-10 68.2 38 81.6
BolC9t56806H Brassica oleracea HOM05D001200 ORTHO05D009713 6.3e-10 67.4 38 78.9
Gohir.D08G077250 Gossypium hirsutum HOM05D001200 ORTHO05D009713 3.1e-09 65.1 48 66.7
Potri.019G014344 Populus trichocarpa HOM05D001200 ORTHO05D009713 4.1e-09 64.7 76 44.7
Nitab4.5_0007979g0060 Nicotiana tabacum HOM05D001200 ORTHO05D009778 7.0e-09 63.9 67 52.2
HanXRQChr14g0428461 Helianthus annuus HOM05D001200 ORTHO05D009713 9.2e-09 63.5 38 76.3
MELO3C029829.2 Cucumis melo HOM05D001200 ORTHO05D009713 2.0e-08 62.4 38 76.3
Solyc02g011760.1 Solanum lycopersicum HOM05D001200 ORTHO05D009713 2.0e-08 62.4 53 60.4
TPR.G30364 Trifolium pratense HOM05D001200 ORTHO05D009713 4.5e-08 61.2 34 79.4
CAN.G8.22 Capsicum annuum HOM05D001200 ORTHO05D009713 3.9e-07 58.2 38 71.1
Hund10653 Selenicereus undatus HOM05D001200 ORTHO05D002731 3.9e-07 58.2 30 86.7
SMO086G0058 Selaginella moellendorffii HOM05D001200 ORTHO05D009713 8.6e-07 57.0 74 47.3
Os09g0485201 Oryza sativa ssp. japonica HOM05D001200 ORTHO05D009713 1.5e-06 56.2 77 45.5
arahy.Tifrunner.gnm1.ann1.WH1VZM Arachis hypogaea HOM05D001200 ORTHO05D009713 3.3e-06 55.1 77 42.9
Oeu043656.1 Olea europaea HOM05D001200 ORTHO05D009713 5.6e-06 54.3 77 45.5
Medtr4g050960 Medicago truncatula HOM05D001200 ORTHO05D009713 7.3e-06 53.9 77 44.2
Lalb_Chr13g0292811 Lupinus albus HOM05D001200 ORTHO05D009713 9.5e-06 53.5 42 61.9


User provided reference genes

Program Settings