Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g023580 Medicago truncatula HOM05D000147 ORTHO05D004093 6.8e-98 360.5 168 100.0
TPR.G26136 Trifolium pratense HOM05D000147 ORTHO05D001254 2.4e-26 122.9 133 47.4
TPR.G12197 Trifolium pratense HOM05D000147 ORTHO05D004093 7.0e-18 94.7 128 39.8
Medtr7g053400 Medicago truncatula HOM05D000147 ORTHO05D004093 1.1e-15 87.4 108 41.7
Medtr6g453270 Medicago truncatula HOM05D000147 ORTHO05D004093 2.5e-15 86.3 144 35.4
TPR.G22171 Trifolium pratense HOM05D000147 ORTHO05D004093 8.0e-14 81.3 79 48.1
Medtr4g035890 Medicago truncatula HOM05D000147 ORTHO05D004093 1.0e-13 80.9 155 34.2
Psat5g258880 Pisum sativum HOM05D000147 ORTHO05D004093 1.4e-13 80.5 121 33.1
Medtr3g085360 Medicago truncatula HOM05D000147 ORTHO05D004093 2.3e-13 79.7 112 34.8
Medtr8g028785 Medicago truncatula HOM05D000147 ORTHO05D004093 2.3e-13 79.7 128 39.1
Medtr8g036780 Medicago truncatula HOM05D000147 ORTHO05D004093 5.2e-13 78.6 69 59.4
Medtr1g087480 Medicago truncatula HOM05D000147 ORTHO05D004093 6.8e-13 78.2 149 32.2
Medtr2g102247 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-12 77.4 83 38.6
Medtr8g039080 Medicago truncatula HOM05D000147 ORTHO05D004093 1.3e-11 73.9 114 36.8
TPR.G15289 Trifolium pratense HOM05D000147 ORTHO05D004093 2.2e-11 73.2 133 35.3
Medtr2g017550 Medicago truncatula HOM05D000147 ORTHO05D004093 4.9e-11 72.0 153 29.4
Medtr6g045427 Medicago truncatula HOM05D000147 ORTHO05D004093 8.3e-11 71.2 152 27.6
Medtr8g027950 Medicago truncatula HOM05D000147 ORTHO05D004093 1.4e-10 70.5 77 39.0
Medtr1g050488 Medicago truncatula HOM05D000147 ORTHO05D004093 1.8e-10 70.1 128 32.8
Medtr3g116210 Medicago truncatula HOM05D000147 ORTHO05D004093 9.2e-10 67.8 121 34.7
TPR.G29999 Trifolium pratense HOM05D000147 ORTHO05D004093 9.2e-10 67.8 104 38.5
TPR.G397 Trifolium pratense HOM05D000147 ORTHO05D004093 9.2e-10 67.8 79 48.1
Medtr7g036825 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-09 67.4 78 33.3
Medtr8g031080 Medicago truncatula HOM05D000147 ORTHO05D004093 1.2e-09 67.4 132 34.1
Medtr4g046027 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-09 67.0 123 33.3
TPR.G3250 Trifolium pratense HOM05D011238 ORTHO05D004093 7.8e-09 64.7 127 28.3
Medtr0015s0120 Medicago truncatula HOM05D000147 ORTHO05D004093 2.3e-08 63.2 128 29.7
Medtr1g054905 Medicago truncatula HOM05D000147 ORTHO05D004093 3.9e-08 62.4 135 26.7
Medtr4g029360 Medicago truncatula HOM05D000147 ORTHO05D004093 3.9e-08 62.4 135 28.1
Medtr5g049680 Medicago truncatula HOM05D000147 ORTHO05D004093 5.0e-08 62.0 68 45.6
CANSAT25G2418 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-07 60.8 108 31.5
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.5e-07 60.5 124 24.2
Medtr8g008800 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-07 60.1 56 51.8
Medtr8g031330 Medicago truncatula HOM05D058715 ORTHO05D048961 2.5e-07 59.7 75 37.3
Lj6P602T49 Lonicera japonica HOM05D000003 ORTHO05D000167 3.3e-07 59.3 94 35.1
Medtr8g038340 Medicago truncatula HOM05D000147 ORTHO05D004093 3.3e-07 59.3 67 43.3
TPR.G16970 Trifolium pratense HOM05D011238 ORTHO05D004093 4.3e-07 58.9 81 33.3
Medtr2g451430 Medicago truncatula HOM05D000147 ORTHO05D004093 7.3e-07 58.2 109 33.9
Medtr1g088650 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-06 57.0 73 38.4
Medtr6g016265 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-06 57.0 71 39.4
Medtr8g006720 Medicago truncatula HOM05D000003 ORTHO05D000004 1.6e-06 57.0 100 35.0
Medtr1g081930 Medicago truncatula HOM05D000147 ORTHO05D004093 2.1e-06 56.6 67 43.3
Medtr5g036320 Medicago truncatula HOM05D000147 ORTHO05D004093 2.1e-06 56.6 87 36.8
TPR.G33654 Trifolium pratense HOM05D000147 ORTHO05D004093 2.1e-06 56.6 85 38.8
Medtr8g022750 Medicago truncatula HOM05D000147 ORTHO05D004093 2.8e-06 56.2 111 29.7
Medtr8g031800 Medicago truncatula HOM05D000147 ORTHO05D004093 2.8e-06 56.2 66 40.9
TPR.G14874 Trifolium pratense HOM05D000147 ORTHO05D004093 3.6e-06 55.8 150 27.3
Medtr1g034430 Medicago truncatula HOM05D000147 ORTHO05D004093 4.7e-06 55.5 125 28.8
Psat5g003480 Pisum sativum HOM05D000147 ORTHO05D004093 6.2e-06 55.1 65 41.5
TPR.G35514 Trifolium pratense HOM05D015550 ORTHO05D014649 6.2e-06 55.1 103 28.2
TPR.G7978 Trifolium pratense HOM05D000147 ORTHO05D004093 6.2e-06 55.1 107 28.0
Lj9P419T24 Lonicera japonica HOM05D000003 ORTHO05D000167 8.0e-06 54.7 76 36.8


User provided reference genes

Program Settings