Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g022870 Medicago truncatula HOM05D002545 ORTHO05D002335 2.5e-172 608.6 293 100.0
TPR.G11793 Trifolium pratense HOM05D002545 ORTHO05D002335 1.6e-33 147.5 108 54.6
TPR.G33155 Trifolium pratense HOM05D002545 ORTHO05D002335 5.1e-32 142.5 106 56.6
TPR.G1298 Trifolium pratense HOM05D002545 ORTHO05D002335 2.2e-27 127.1 92 60.9
TPR.G35652 Trifolium pratense HOM05D002545 ORTHO05D002335 4.6e-25 119.4 91 56.0
Medtr6g060510 Medicago truncatula HOM05D000001 ORTHO05D011690 1.9e-23 114.0 108 48.1
TPR.G35310 Trifolium pratense HOM05D002545 ORTHO05D002335 3.7e-22 109.8 132 44.7
TPR.G5246 Trifolium pratense HOM05D002545 ORTHO05D002335 6.9e-21 105.5 131 45.8
TPR.G14179 Trifolium pratense HOM05D002545 ORTHO05D002335 3.2e-18 96.7 165 30.9
TPR.G25559 Trifolium pratense HOM05D002545 ORTHO05D002335 3.2e-18 96.7 83 48.2
TPR.G29823 Trifolium pratense HOM05D000003 ORTHO05D002335 4.2e-18 96.3 76 51.3
TPR.G16000 Trifolium pratense HOM05D002545 ORTHO05D002335 1.4e-16 91.3 100 36.0
Psat0s4795g0040 Pisum sativum HOM05D000003 ORTHO05D000004 7.4e-15 85.5 69 47.8
Medtr2g095160 Medicago truncatula HOM05D002545 ORTHO05D002335 6.3e-14 82.4 165 29.7
TPR.G8857 Trifolium pratense HOM05D002545 ORTHO05D002335 9.1e-13 78.6 70 47.1
Medtr4g081960 Medicago truncatula HOM05D002545 ORTHO05D002335 1.5e-12 77.8 121 32.2
Medtr1g046260 Medicago truncatula HOM05D002545 ORTHO05D002335 2.6e-12 77.0 94 37.2
TPR.G35893 Trifolium pratense HOM05D007105 ORTHO05D009304 1.3e-11 74.7 70 50.0
Medtr5g054985 Medicago truncatula HOM05D002545 ORTHO05D002335 1.7e-11 74.3 99 29.3
Medtr4g079520 Medicago truncatula HOM05D002545 ORTHO05D002335 2.5e-10 70.5 96 29.2
Medtr8g074940 Medicago truncatula HOM05D002545 ORTHO05D002335 2.5e-10 70.5 97 34.0
Medtr7g033295 Medicago truncatula HOM05D002545 ORTHO05D002335 3.2e-10 70.1 94 30.9
Medtr7g052100 Medicago truncatula HOM05D002545 ORTHO05D002335 7.2e-10 68.9 100 29.0
Medtr3g052690 Medicago truncatula HOM05D002545 ORTHO05D002335 1.2e-09 68.2 100 29.0
Medtr4g097730 Medicago truncatula HOM05D002545 ORTHO05D002335 1.2e-09 68.2 99 28.3
Lalb_Chr18g0059261 Lupinus albus HOM05D011108 ORTHO05D002335 2.1e-09 67.4 158 26.6
Medtr4g061240 Medicago truncatula HOM05D002545 ORTHO05D002335 2.7e-09 67.0 105 28.6
Medtr2g040320 Medicago truncatula HOM05D002545 ORTHO05D002335 4.7e-09 66.2 93 31.2
Medtr5g007390 Medicago truncatula HOM05D000003 ORTHO05D002335 4.7e-09 66.2 105 27.6
Medtr6g072515 Medicago truncatula HOM05D000003 ORTHO05D002335 6.1e-09 65.9 99 28.3
Medtr4g036525 Medicago truncatula HOM05D002545 ORTHO05D002335 1.4e-08 64.7 83 34.9
Medtr6g016340 Medicago truncatula HOM05D002545 ORTHO05D002335 1.8e-08 64.3 93 30.1
Medtr3g031290 Medicago truncatula HOM05D002545 ORTHO05D002335 2.3e-08 63.9 104 27.9
Medtr6g033425 Medicago truncatula HOM05D002545 ORTHO05D002335 2.3e-08 63.9 61 47.5
TPR.G37075 Trifolium pratense HOM05D000003 ORTHO05D002335 5.1e-08 62.8 110 30.9
Medtr5g008770 Medicago truncatula HOM05D002545 ORTHO05D002335 6.7e-08 62.4 48 58.3
Medtr8g006020 Medicago truncatula HOM05D002545 ORTHO05D002335 6.7e-08 62.4 99 29.3
TPR.G28501 Trifolium pratense HOM05D002545 ORTHO05D002335 6.7e-08 62.4 98 28.6
Medtr2g089160 Medicago truncatula HOM05D002545 ORTHO05D002335 8.8e-08 62.0 93 26.9
Medtr5g014380 Medicago truncatula HOM05D002545 ORTHO05D002335 8.8e-08 62.0 103 28.2
Medtr5g025040 Medicago truncatula HOM05D002545 ORTHO05D002335 8.8e-08 62.0 93 30.1
TPR.G27738 Trifolium pratense HOM05D000003 ORTHO05D000006 8.8e-08 62.0 116 32.8
TPR.G32089 Trifolium pratense HOM05D000003 ORTHO05D000004 8.8e-08 62.0 155 25.8
Medtr5g027710 Medicago truncatula HOM05D000003 ORTHO05D048906 2.0e-07 60.8 98 28.6
Lj4g0010960 Lotus japonicus HOM05D009310 ORTHO05D010885 2.6e-07 60.5 90 31.1
Medtr1g072480 Medicago truncatula HOM05D002545 ORTHO05D002335 3.3e-07 60.1 69 34.8
Medtr8g024270 Medicago truncatula HOM05D002545 ORTHO05D002335 3.3e-07 60.1 113 30.1
Medtr3g112330 Medicago truncatula HOM05D000003 ORTHO05D002335 7.4e-07 58.9 82 30.5
Medtr1g055370 Medicago truncatula HOM05D002545 ORTHO05D002335 9.7e-07 58.5 91 33.0
TPR.G36671 Trifolium pratense HOM05D002545 ORTHO05D002335 9.7e-07 58.5 155 21.3
ECA246G1196 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.3e-06 58.2 96 29.2
ECA236G3067 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.2e-06 57.4 89 33.7
Medtr1g015073 Medicago truncatula HOM05D000003 ORTHO05D002335 2.2e-06 57.4 151 25.8
Glyma.05G143850 Glycine max HOM05D013446 ORTHO05D017041 3.7e-06 56.6 105 25.7
Medtr3g070320 Medicago truncatula HOM05D000003 ORTHO05D002335 3.7e-06 56.6 76 31.6
Medtr8g037820 Medicago truncatula HOM05D002545 ORTHO05D002335 3.7e-06 56.6 100 29.0
HanXRQChr07g0203731 Helianthus annuus HOM05D000003 ORTHO05D000004 4.8e-06 56.2 99 30.3
Medtr5g036930 Medicago truncatula HOM05D002545 ORTHO05D002335 8.2e-06 55.5 98 29.6
Medtr5g080210 Medicago truncatula HOM05D002545 ORTHO05D002335 8.2e-06 55.5 100 27.0


User provided reference genes

Program Settings