Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g020870 Medicago truncatula HOM05D000002 ORTHO05D000047 2.3e-99 365.5 179 100.0
Hma1.2p1_0210F.1_g089480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.8e-11 71.6 130 35.4
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.8e-11 71.6 130 35.4
Ca_08364_v3 Cicer arietinum L. HOM05D007163 ORTHO05D009213 4.4e-10 68.9 51 70.6
TPR.G10316 Trifolium pratense HOM05D000002 ORTHO05D000047 9.8e-10 67.8 62 56.5
Ca_24124_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.8e-08 63.5 51 66.7
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-08 62.8 145 31.7
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-08 62.8 157 30.6
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.4e-08 62.0 149 32.2
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-08 62.0 149 32.2
TPR.G20867 Trifolium pratense HOM05D000002 ORTHO05D000047 5.4e-08 62.0 46 67.4
Hma1.2p1_1207F.1_g267040 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-08 61.6 143 34.3
Cpa.g.sc15.92 Carica papaya HOM05D001549 ORTHO05D003098 9.1e-08 61.2 109 36.7
TPR.G9414 Trifolium pratense HOM05D005075 ORTHO05D007097 1.6e-07 60.5 44 65.9
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-07 59.7 68 47.1
Hma1.2p1_0111F.1_g053735 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-07 59.7 68 47.1
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-07 59.7 68 47.1
Hma1.2p1_0308F.1_g120095 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-07 59.7 68 47.1
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-07 59.7 68 47.1
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-07 59.7 68 47.1
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-07 59.7 126 35.7
Oeu044270.1 Olea europaea HOM05D000002 ORTHO05D000047 4.5e-07 58.9 125 33.6
Nn5g30282 Nelumbo nucifera HOM05D000002 ORTHO05D000047 5.9e-07 58.5 99 36.4
Hma1.2p1_0069F.1_g037490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.7e-07 58.2 133 33.8
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.7e-07 58.2 118 35.6
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-06 57.8 145 32.4
Hma1.2p1_0219F.1_g092870 Hydrangea macrophylla HOM05D000384 ORTHO05D000047 1.0e-06 57.8 84 45.2
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 1.0e-06 57.8 161 29.8
CSS0008463 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-06 57.4 137 34.3
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.3e-06 57.4 104 38.5
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-06 57.0 110 37.3
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-06 57.0 129 31.8
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.9e-06 56.2 119 36.1
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.9e-06 56.2 119 36.1
Hma1.2p1_0503F.1_g168010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.9e-06 56.2 46 58.7
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-06 55.8 89 38.2
Hma1.2p1_0079F.1_g041630 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.8e-06 55.8 103 38.8
Cpa.g.sc15.70 Carica papaya HOM05D000002 ORTHO05D000047 5.0e-06 55.5 105 36.2
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.6e-06 55.1 67 47.8
Hma1.2p1_0020F.1_g014090 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.6e-06 55.1 45 60.0
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 6.6e-06 55.1 104 35.6
TPR.G28095 Trifolium pratense HOM05D000002 ORTHO05D000001 6.6e-06 55.1 45 60.0
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-06 54.7 145 31.7
Cpa.g.sc202.10 Carica papaya HOM05D000002 ORTHO05D000047 8.6e-06 54.7 42 64.3


User provided reference genes

Program Settings