Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 9.9e-107 390.2 206 100.0
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 8.7e-95 350.5 207 87.4
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 1.9e-94 349.4 207 88.4
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 1.6e-80 303.1 188 86.2
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 3.7e-77 292.0 207 75.8
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 1.1e-76 290.4 207 75.8
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 1.8e-76 289.7 207 74.9
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 1.0e-74 283.9 206 73.8
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 1.0e-74 283.9 206 73.8
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 8.5e-74 280.8 207 74.4
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 1.2e-72 276.9 211 70.1
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 1.0e-71 273.9 207 70.5
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 5.1e-71 271.6 209 68.9
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 6.7e-71 271.2 213 72.3
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 8.7e-71 270.8 211 68.7
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 1.1e-70 270.4 208 69.7
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 1.9e-70 269.6 212 68.4
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 4.3e-70 268.5 212 70.3
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 9.7e-70 267.3 211 68.2
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 9.7e-70 267.3 211 68.2
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 9.7e-70 267.3 208 69.2
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 1.6e-69 266.5 210 69.0
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 4.8e-69 265.0 222 68.0
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 1.8e-68 263.1 212 69.3
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 2.4e-68 262.7 217 67.3
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 6.9e-68 261.2 215 67.9
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 2.0e-67 259.6 210 68.1
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 2.6e-67 259.2 215 67.4
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 4.5e-67 258.5 211 68.2
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 4.5e-67 258.5 215 67.9
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 7.7e-67 257.7 210 67.6
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 1.0e-66 257.3 212 67.0
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 1.7e-66 256.5 224 63.8
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 1.7e-66 256.5 224 63.8
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 2.9e-66 255.8 207 66.7
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 5.0e-66 255.0 215 67.4
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 5.0e-66 255.0 210 66.7
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 2.5e-65 252.7 217 65.4
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 3.2e-65 252.3 163 79.8
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 3.2e-65 252.3 211 64.9
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 5.5e-65 251.5 219 64.4
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 9.4e-65 250.8 149 86.6
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.1e-64 249.6 220 63.6
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 2.1e-64 249.6 218 64.2
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 2.7e-64 249.2 166 77.7
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 2.7e-64 249.2 208 66.3
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 7.9e-64 247.7 213 64.8
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 2.3e-63 246.1 166 75.9
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 3.9e-63 245.4 223 62.3
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 5.1e-63 245.0 175 75.4
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 5.1e-63 245.0 212 63.7
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 1.1e-62 243.8 216 63.0
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 1.1e-62 243.8 206 63.6
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 1.1e-62 243.8 215 63.7
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 1.1e-62 243.8 211 64.5
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 2.0e-62 243.0 164 78.7
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 2.0e-62 243.0 210 65.2
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 2.6e-62 242.7 214 61.7
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 9.7e-62 240.7 207 65.7
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 9.7e-62 240.7 217 61.8
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 1.3e-61 240.4 211 63.0
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.3e-61 240.4 212 62.7
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 1.7e-61 240.0 148 82.4
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 2.2e-61 239.6 204 65.2
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 2.8e-61 239.2 131 90.1
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 4.8e-61 238.4 258 55.8
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 1.4e-60 236.9 214 59.3
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 1.8e-60 236.5 226 60.2
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 6.9e-60 234.6 207 62.8
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 9.1e-60 234.2 157 77.1
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.2e-59 233.8 237 57.8
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 2.0e-59 233.0 166 74.7
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 2.6e-59 232.6 198 66.2
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 1.3e-58 230.3 164 71.3
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.2e-58 229.6 130 88.5
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 2.2e-58 229.6 234 57.3
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 2.2e-58 229.6 217 58.5
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 8.5e-58 227.6 235 57.0
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 1.1e-57 227.3 210 59.5
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 3.2e-57 225.7 189 65.1
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 7.2e-57 224.6 206 60.7
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 1.2e-56 223.8 221 58.4
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 1.6e-56 223.4 149 75.2
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 2.1e-56 223.0 213 58.2
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 2.1e-56 223.0 149 74.5
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 2.7e-56 222.6 163 72.4
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 4.7e-56 221.9 149 74.5
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 6.1e-56 221.5 211 58.3
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 6.1e-56 221.5 279 49.5
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 1.4e-55 220.3 147 74.8
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 2.3e-55 219.5 199 62.8
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 2.3e-55 219.5 149 73.8
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.3e-55 219.5 183 62.8
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 3.9e-55 218.8 137 77.4
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 5.2e-55 218.4 149 73.2
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 6.7e-55 218.0 149 72.5
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 6.7e-55 218.0 149 72.5
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 6.7e-55 218.0 207 58.5
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 6.7e-55 218.0 149 72.5
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 6.7e-55 218.0 149 73.2
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 1.1e-54 217.2 149 73.2
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 4.4e-54 215.3 147 72.8
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 5.7e-54 214.9 129 82.2
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 1.3e-53 213.8 217 58.1
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 6.3e-53 211.5 172 62.2
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 8.2e-53 211.1 207 60.4
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 1.4e-52 210.3 120 87.5
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 3.1e-52 209.1 202 60.9
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 3.1e-52 209.1 287 47.0
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 9.1e-52 207.6 194 59.8
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 9.1e-52 207.6 148 70.3
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 1.6e-51 206.8 160 70.0
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 5.0e-50 201.8 133 75.2
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 1.9e-49 199.9 191 60.2
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 7.2e-49 198.0 159 63.5
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 3.6e-48 195.7 144 66.0
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 8.0e-48 194.5 208 54.8
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 8.8e-47 191.0 170 61.8
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 3.3e-46 189.1 175 60.0
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 5.7e-46 188.3 161 64.0
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 7.5e-46 188.0 208 54.3
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 1.7e-45 186.8 130 71.5
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 1.7e-45 186.8 120 75.8
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 1.8e-44 183.3 189 55.0
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 2.9e-42 176.0 124 67.7
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 3.8e-42 175.6 146 65.1
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 1.9e-41 173.3 189 54.0
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 3.2e-41 172.6 133 64.7
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 9.4e-41 171.0 134 67.9
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 2.1e-40 169.9 206 51.5
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.7e-40 169.5 131 66.4
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 3.6e-40 169.1 134 65.7
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 4.7e-40 168.7 121 71.1
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 1.0e-39 167.5 130 67.7
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 1.0e-39 167.5 203 53.7
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 1.4e-39 167.2 166 58.4
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 2.3e-39 166.4 118 72.0
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 4.0e-39 165.6 164 57.9
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 2.6e-38 162.9 137 62.8
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 6.3e-37 158.3 104 76.9
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.1e-36 157.5 103 78.6
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 4.1e-36 155.6 133 57.1
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 1.2e-35 154.1 148 58.8
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 1.7e-26 123.6 159 45.9
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 5.6e-25 118.6 138 44.9
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 2.2e-21 106.7 87 64.4
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 4.1e-20 102.4 62 83.9
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 9.5e-17 91.3 174 35.6
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 2.8e-16 89.7 88 54.5
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 1.5e-14 84.0 116 37.1
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 6.6e-10 68.6 38 84.2
TAR636G2964 Trochodendron aralioides HOM05D002231 ORTHO05D006103 1.4e-07 60.8 35 82.9
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 8.9e-07 58.2 39 61.5


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