Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr3g068135 Medicago truncatula HOM05D008036 ORTHO05D025835 4.4e-115 417.9 206 100.0
Medtr3g046650 Medicago truncatula HOM05D008036 ORTHO05D025835 7.0e-20 101.7 133 37.6
Medtr8g005940 Medicago truncatula HOM05D008036 ORTHO05D000174 2.1e-16 90.1 115 48.7
Medtr3g036220 Medicago truncatula HOM05D008036 ORTHO05D000174 1.5e-14 84.0 117 47.0
Medtr1g105785 Medicago truncatula HOM05D008036 ORTHO05D000174 2.0e-14 83.6 207 28.0
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 3.7e-13 79.3 205 27.8
Medtr4g060433 Medicago truncatula HOM05D062515 ORTHO05D025835 8.3e-13 78.2 108 39.8
Medtr7g451880 Medicago truncatula HOM05D008036 ORTHO05D000174 5.4e-12 75.5 148 37.8
Medtr2g005490 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-11 74.3 148 37.8
Medtr2g007410 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-11 74.3 148 37.8
Medtr2g010270 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-11 74.3 147 37.4
Medtr2g010570 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-11 74.3 148 37.8
Medtr3g031190 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-11 74.3 148 37.8
Medtr5g030110 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-11 74.3 148 37.8
Medtr5g056290 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-11 74.3 148 37.8
Medtr5g081190 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-11 74.3 148 37.8
Medtr5g091480 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-11 74.3 148 37.8
Medtr6g087820 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-11 74.3 148 37.8
Medtr7g024060 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-11 74.3 148 37.8
Medtr8g446640 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-11 74.3 148 37.8
Medtr4g058660 Medicago truncatula HOM05D008036 ORTHO05D000174 2.7e-11 73.2 148 37.2
Medtr7g110100 Medicago truncatula HOM05D008036 ORTHO05D000174 1.0e-10 71.2 205 25.9
Medtr7g051400 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-10 70.9 182 25.8
Medtr0048s0080 Medicago truncatula HOM05D008036 ORTHO05D000174 2.3e-10 70.1 188 28.7
Medtr5g071020 Medicago truncatula HOM05D008036 ORTHO05D000174 5.0e-10 68.9 96 47.9
Medtr5g045850 Medicago truncatula HOM05D008036 ORTHO05D000174 6.6e-10 68.6 130 39.2
Medtr3g452170 Medicago truncatula HOM05D008036 ORTHO05D000174 1.5e-09 67.4 201 24.4
Medtr7g074180 Medicago truncatula HOM05D008036 ORTHO05D000174 7.3e-09 65.1 147 34.0
Medtr5g012180 Medicago truncatula HOM05D008036 ORTHO05D000174 1.6e-08 63.9 131 37.4
Medtr8g104590 Medicago truncatula HOM05D062515 ORTHO05D025835 3.6e-08 62.8 91 39.6
Medtr3g007260 Medicago truncatula HOM05D008036 ORTHO05D000174 6.2e-08 62.0 36 75.0
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 6.2e-08 62.0 167 29.9
Medtr1g011490 Medicago truncatula HOM05D008036 ORTHO05D000174 5.2e-07 58.9 142 33.1
Medtr1g023370 Medicago truncatula HOM05D008036 ORTHO05D000174 6.8e-07 58.5 129 37.2
TPR.G21729 Trifolium pratense HOM05D003813 ORTHO05D004557 6.8e-07 58.5 170 26.5
Medtr2g435900 Medicago truncatula HOM05D008036 ORTHO05D000174 8.9e-07 58.2 33 84.8
Medtr3g015660 Medicago truncatula HOM05D008036 ORTHO05D000174 8.9e-07 58.2 33 84.8
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 8.9e-07 58.2 169 26.6
TPR.G13367 Trifolium pratense HOM05D008036 ORTHO05D000174 1.2e-06 57.8 36 66.7
Medtr5g019960 Medicago truncatula HOM05D008036 ORTHO05D000174 2.0e-06 57.0 36 69.4
Medtr4g032565 Medicago truncatula HOM05D002441 ORTHO05D002376 2.6e-06 56.6 78 34.6
Medtr6g073570 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-06 56.6 36 75.0
Medtr7g045450 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-06 56.6 36 75.0
Medtr4g032585 Medicago truncatula HOM05D000353 ORTHO05D002376 3.4e-06 56.2 78 34.6
Medtr3g449160 Medicago truncatula HOM05D008036 ORTHO05D000174 4.4e-06 55.8 33 78.8
Medtr0105s0080 Medicago truncatula HOM05D008036 ORTHO05D000174 5.8e-06 55.5 33 81.8
Medtr1g052715 Medicago truncatula HOM05D008036 ORTHO05D000174 5.8e-06 55.5 174 28.7
TPR.G23662 Trifolium pratense HOM05D008036 ORTHO05D000174 7.5e-06 55.1 146 30.1
Medtr6g024030 Medicago truncatula HOM05D008036 ORTHO05D000174 9.9e-06 54.7 34 70.6
Medtr6g465570 Medicago truncatula HOM05D008036 ORTHO05D008317 9.9e-06 54.7 36 63.9


User provided reference genes

Program Settings