Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 2.0e-236 822.0 402 100.0
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 1.2e-217 759.6 402 92.3
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 3.9e-208 728.0 402 88.1
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 2.7e-201 705.3 370 93.2
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 4.1e-197 691.4 409 83.6
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 4.3e-191 671.4 404 80.4
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 4.1e-189 664.8 404 80.4
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 2.9e-187 658.7 407 80.1
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 2.3e-184 649.0 401 79.3
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 1.5e-183 646.4 394 79.4
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 1.8e-157 559.7 412 68.2
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 1.3e-155 553.5 399 68.4
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 3.8e-155 552.0 399 68.7
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 1.8e-152 543.1 408 66.2
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 2.3e-152 542.7 407 65.8
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 1.7e-150 536.6 407 65.6
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 2.2e-150 536.2 399 66.4
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 2.2e-150 536.2 404 64.9
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 3.7e-150 535.4 395 65.8
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 6.3e-150 534.6 399 66.4
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 8.3e-150 534.3 415 64.6
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 1.4e-149 533.5 404 65.6
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.1e-149 532.3 391 66.2
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 7.0e-149 531.2 403 66.0
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 3.5e-148 528.9 378 67.5
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 1.0e-147 527.3 378 67.7
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 2.3e-147 526.2 378 66.1
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 6.6e-147 524.6 387 66.4
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 1.1e-146 523.9 408 63.7
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 4.3e-146 521.9 401 63.6
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 1.2e-145 520.4 396 65.2
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 2.1e-145 519.6 383 64.5
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 3.6e-145 518.8 376 67.0
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 1.0e-144 517.3 394 64.2
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 2.3e-144 516.2 373 66.5
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 4.0e-144 515.4 412 64.1
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 1.5e-143 513.5 410 62.7
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 1.5e-143 513.5 408 63.0
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 3.4e-143 512.3 406 61.6
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 4.4e-143 511.9 397 64.0
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 9.8e-143 510.8 411 61.8
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 2.2e-142 509.6 408 62.0
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.2e-142 509.6 411 61.8
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 3.7e-142 508.8 410 62.4
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 2.4e-141 506.1 397 64.0
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 5.4e-141 505.0 412 62.1
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 7.0e-141 504.6 407 63.9
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 5.9e-140 501.5 396 62.4
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.3e-139 499.6 372 65.6
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 3.9e-139 498.8 396 61.9
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 8.6e-139 497.7 399 61.4
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 8.6e-139 497.7 376 63.8
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.2e-137 493.8 387 62.0
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 1.2e-137 493.8 292 80.8
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 2.0e-135 486.5 402 61.2
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 5.8e-135 485.0 382 63.9
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 1.3e-134 483.8 409 60.9
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 3.7e-134 482.3 380 60.8
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 4.9e-134 481.9 409 60.6
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 4.9e-134 481.9 409 60.6
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 4.1e-133 478.8 385 63.1
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 7.0e-133 478.0 369 64.2
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 1.2e-132 477.2 369 63.4
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 1.6e-132 476.9 378 62.2
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.6e-132 476.9 429 57.3
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 1.7e-131 473.4 444 56.8
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 3.9e-131 472.2 400 59.8
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 3.3e-130 469.2 417 58.8
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 9.5e-130 467.6 446 55.6
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 9.5e-130 467.6 369 61.8
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 2.1e-129 466.5 391 58.6
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.1e-128 462.6 400 59.5
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 4.4e-127 458.8 412 57.8
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 9.8e-127 457.6 368 60.3
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 1.3e-126 457.2 333 64.9
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 1.7e-123 446.8 372 58.6
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 1.8e-120 436.8 443 53.7
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 2.2e-118 429.9 311 66.9
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.4e-117 427.2 374 58.3
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 5.4e-117 425.2 398 55.8
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 3.0e-115 419.5 369 59.1
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.5e-114 416.4 295 67.1
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 2.6e-111 406.4 286 67.1
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 6.4e-110 401.7 386 53.1
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 1.1e-104 384.4 305 60.7
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 7.9e-100 368.2 284 61.3
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 4.8e-97 359.0 287 65.2
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 4.9e-94 349.0 314 54.5
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 1.7e-86 323.9 229 68.6
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 4.9e-86 322.4 241 66.4
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 1.1e-82 311.2 302 52.3
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 5.3e-80 302.4 393 44.5
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.5e-77 293.5 257 58.8
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 2.1e-76 290.4 186 80.6
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 1.3e-75 287.7 255 58.0
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 2.2e-65 253.8 215 59.1
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 6.3e-65 252.3 387 38.5
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 2.6e-58 230.3 201 58.7
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 2.3e-51 207.2 105 95.2
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.5e-50 204.5 158 64.6
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 4.2e-45 186.4 141 61.0
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 7.2e-45 185.7 394 32.7
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.9e-37 161.0 145 57.2
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.2e-34 151.8 153 49.7
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 4.5e-31 139.8 107 69.2
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.0e-22 110.5 75 65.3
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 5.0e-22 109.8 359 27.9
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 6.6e-22 109.4 87 59.8
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.9e-21 107.8 380 26.3
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 4.3e-21 106.7 403 27.8
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 4.0e-19 100.1 139 40.3
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 4.4e-18 96.7 74 70.3
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 4.9e-17 93.2 374 24.9
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 1.9e-13 81.3 67 64.2
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 8.9e-11 72.4 65 50.8
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 2.0e-10 71.2 76 52.6
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.3e-09 68.6 64 43.8
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 2.2e-09 67.8 68 50.0


User provided reference genes

Program Settings