Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr3g040760 Medicago truncatula HOM05D009185 ORTHO05D010768 1.8e-78 295.8 142 100.0
TPR.G18586 Trifolium pratense HOM05D002881 ORTHO05D000589 8.5e-25 117.5 87 63.2
Medtr8g059190 Medicago truncatula HOM05D009185 ORTHO05D010768 1.4e-22 110.2 74 63.5
TPR.G22842 Trifolium pratense HOM05D000047 ORTHO05D000044 6.8e-22 107.8 87 57.5
Medtr0157s0040 Medicago truncatula HOM05D009185 ORTHO05D010768 3.4e-21 105.5 128 46.9
Medtr1g050415 Medicago truncatula HOM05D009185 ORTHO05D010768 7.5e-21 104.4 79 58.2
Medtr5g057715 Medicago truncatula HOM05D009185 ORTHO05D010768 2.8e-20 102.4 100 49.0
Medtr8g095235 Medicago truncatula HOM05D009185 ORTHO05D010768 3.7e-20 102.1 87 54.0
Medtr0014s0410 Medicago truncatula HOM05D009185 ORTHO05D010768 8.3e-20 100.9 66 71.2
Medtr0362s0010 Medicago truncatula HOM05D009185 ORTHO05D010768 7.0e-19 97.8 60 75.0
Medtr0001s0260 Medicago truncatula HOM05D009185 ORTHO05D010768 1.2e-18 97.1 73 57.5
Medtr7g034030 Medicago truncatula HOM05D009185 ORTHO05D010768 2.7e-18 95.9 67 65.7
Medtr0155s0050 Medicago truncatula HOM05D009185 ORTHO05D010768 6.5e-17 91.3 60 65.0
Medtr7g095830 Medicago truncatula HOM05D009185 ORTHO05D010768 1.1e-16 90.5 107 42.1
Medtr4g045717 Medicago truncatula HOM05D009185 ORTHO05D010768 1.5e-16 90.1 73 54.8
Medtr4g045943 Medicago truncatula HOM05D009185 ORTHO05D010768 3.3e-16 89.0 73 54.8
Medtr6g471190 Medicago truncatula HOM05D009185 ORTHO05D010768 3.3e-16 89.0 94 52.1
Medtr1g036650 Medicago truncatula HOM05D009185 ORTHO05D010768 4.7e-15 85.1 65 58.5
Medtr0005s0250 Medicago truncatula HOM05D009185 ORTHO05D010768 4.0e-14 82.0 59 66.1
Medtr0441s0020 Medicago truncatula HOM05D009185 ORTHO05D010768 5.2e-14 81.6 64 56.2
Medtr3g090210 Medicago truncatula HOM05D009185 ORTHO05D010768 1.7e-12 76.6 64 54.7
Medtr0389s0020 Medicago truncatula HOM05D009185 ORTHO05D010768 3.7e-12 75.5 75 44.0
Medtr3g463110 Medicago truncatula HOM05D009185 ORTHO05D010768 8.3e-12 74.3 74 44.6
Medtr0015s0170 Medicago truncatula HOM05D009185 ORTHO05D010768 1.4e-11 73.6 72 48.6
Medtr0002s0070 Medicago truncatula HOM05D009185 ORTHO05D010768 3.1e-11 72.4 72 47.2
Medtr8g461950 Medicago truncatula HOM05D021403 ORTHO05D264271 2.7e-10 69.3 50 62.0
Medtr0159s0060 Medicago truncatula HOM05D011496 ORTHO05D010768 4.5e-10 68.6 87 43.7
Medtr3g020105 Medicago truncatula HOM05D011496 ORTHO05D010768 4.5e-10 68.6 87 43.7
Medtr2g076103 Medicago truncatula HOM05D011496 ORTHO05D010768 5.9e-10 68.2 87 43.7
Medtr5g057040 Medicago truncatula HOM05D011496 ORTHO05D000589 7.8e-10 67.8 87 43.7
Medtr0260s0010 Medicago truncatula HOM05D011496 ORTHO05D000301 1.0e-09 67.4 87 43.7
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 5.0e-09 65.1 87 35.6
Ca_06778_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 5.0e-09 65.1 88 35.2
Medtr3g048545 Medicago truncatula HOM05D011496 ORTHO05D010768 6.6e-09 64.7 87 41.4
Medtr7g081462 Medicago truncatula HOM05D011496 ORTHO05D010768 6.6e-09 64.7 87 41.4
Medtr2g064025 Medicago truncatula HOM05D011496 ORTHO05D010768 8.6e-09 64.3 87 41.4
Medtr0600s0020 Medicago truncatula HOM05D008900 ORTHO05D010768 1.9e-08 63.2 46 60.9
Medtr1g071213 Medicago truncatula HOM05D021403 ORTHO05D262188 1.9e-08 63.2 48 62.5
Medtr2g461620 Medicago truncatula HOM05D021403 ORTHO05D264758 2.5e-08 62.8 48 60.4
Medtr2g037220 Medicago truncatula HOM05D011496 ORTHO05D010768 4.3e-08 62.0 87 41.4
Ca_01749_v3 Cicer arietinum L. HOM05D011496 ORTHO05D010768 1.6e-07 60.1 122 30.3
Ca_15675_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.6e-07 60.1 87 35.6
TPR.G10789 Trifolium pratense HOM05D000047 ORTHO05D000589 1.6e-07 60.1 87 33.3
Medtr6g015335 Medicago truncatula HOM05D009185 ORTHO05D010768 3.6e-07 58.9 52 51.9
TPR.G22869 Trifolium pratense HOM05D056069 ORTHO05D010768 3.6e-07 58.9 79 31.6
Duzib268G0258 Durio zibethinus HOM05D000047 ORTHO05D000589 4.7e-07 58.5 92 37.0
Medtr6g464470 Medicago truncatula HOM05D002881 ORTHO05D002983 6.1e-07 58.2 65 49.2
TPR.G19305 Trifolium pratense HOM05D000047 ORTHO05D000589 6.1e-07 58.2 87 31.0
Medtr1g036660 Medicago truncatula HOM05D021403 ORTHO05D266169 8.0e-07 57.8 48 58.3
Medtr5g053355 Medicago truncatula HOM05D021403 ORTHO05D257766 8.0e-07 57.8 48 60.4
Potri.008G142920 Populus trichocarpa HOM05D000047 ORTHO05D000589 1.0e-06 57.4 109 28.4
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 1.4e-06 57.0 119 30.3
Medtr1g071170 Medicago truncatula HOM05D009185 ORTHO05D010768 1.4e-06 57.0 52 51.9
TPR.G33037 Trifolium pratense HOM05D000047 ORTHO05D000589 1.4e-06 57.0 87 29.9
Medtr4g033680 Medicago truncatula HOM05D009185 ORTHO05D010768 1.8e-06 56.6 112 34.8
Medtr7g010878 Medicago truncatula HOM05D011496 ORTHO05D010768 1.8e-06 56.6 79 41.8
Medtr3g090200 Medicago truncatula HOM05D009185 ORTHO05D010768 4.0e-06 55.5 52 50.0


User provided reference genes

Program Settings