Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr3g030260 Medicago truncatula HOM05D009488 ORTHO05D011222 2.2e-123 445.7 230 100.0
Medtr2g009950 Medicago truncatula HOM05D009488 ORTHO05D011222 3.1e-117 425.2 227 96.5
Medtr7g016020 Medicago truncatula HOM05D008332 ORTHO05D010135 2.0e-95 352.8 195 95.4
Medtr2g083020 Medicago truncatula HOM05D008332 ORTHO05D010135 5.7e-95 351.3 197 93.9
Medtr6g033455 Medicago truncatula HOM05D009488 ORTHO05D011222 2.2e-75 286.2 232 65.9
Medtr0510s0010 Medicago truncatula HOM05D009488 ORTHO05D011222 8.9e-56 221.1 232 54.3
Medtr5g454260 Medicago truncatula HOM05D008332 ORTHO05D262187 8.3e-46 188.0 127 82.7
TPR.G14044 Trifolium pratense HOM05D009488 ORTHO05D011222 1.2e-41 174.1 243 43.6
TPR.G35321 Trifolium pratense HOM05D009488 ORTHO05D011222 5.2e-40 168.7 253 41.9
Medtr0012s0290 Medicago truncatula HOM05D000005 ORTHO05D000012 1.6e-36 157.1 134 61.2
TPR.G708 Trifolium pratense HOM05D009488 ORTHO05D011222 1.0e-35 154.5 131 58.0
TPR.G20426 Trifolium pratense HOM05D009488 ORTHO05D011222 1.3e-35 154.1 190 46.3
TPR.G36440 Trifolium pratense HOM05D009488 ORTHO05D011222 1.2e-33 147.5 157 50.3
TPR.G26782 Trifolium pratense HOM05D009488 ORTHO05D011222 1.6e-33 147.1 124 57.3
TPR.G29704 Trifolium pratense HOM05D009488 ORTHO05D011222 1.1e-32 144.4 197 44.2
TPR.G28536 Trifolium pratense HOM05D009488 ORTHO05D011222 1.2e-31 141.0 139 53.2
Medtr7g045350 Medicago truncatula HOM05D009488 ORTHO05D011222 7.6e-31 138.3 150 50.7
TPR.G23240 Trifolium pratense HOM05D009488 ORTHO05D011222 6.4e-30 135.2 239 39.7
TPR.G485 Trifolium pratense HOM05D009488 ORTHO05D011222 4.2e-29 132.5 260 35.8
TPR.G23242 Trifolium pratense HOM05D009488 ORTHO05D011222 4.6e-28 129.0 112 58.0
Medtr0053s0080 Medicago truncatula HOM05D008332 ORTHO05D010135 7.8e-28 128.3 190 47.4
TPR.G31905 Trifolium pratense HOM05D009488 ORTHO05D011222 5.1e-27 125.6 230 36.5
TPR.G7322 Trifolium pratense HOM05D009488 ORTHO05D011222 1.1e-26 124.4 239 36.8
Medtr7g074720 Medicago truncatula HOM05D009488 ORTHO05D011222 4.3e-26 122.5 74 77.0
Medtr8g461570 Medicago truncatula HOM05D009488 ORTHO05D011222 4.3e-26 122.5 79 73.4
TPR.G4951 Trifolium pratense HOM05D000025 ORTHO05D000040 1.6e-25 120.6 227 36.1
TPR.G29351 Trifolium pratense HOM05D009488 ORTHO05D011222 8.1e-25 118.2 167 45.5
TPR.G32032 Trifolium pratense HOM05D009488 ORTHO05D011222 9.3e-21 104.8 92 56.5
TPR.G24434 Trifolium pratense HOM05D009488 ORTHO05D011222 2.1e-20 103.6 81 60.5
TPR.G4083 Trifolium pratense HOM05D009488 ORTHO05D011222 6.9e-16 88.6 69 58.0
TPR.G15155 Trifolium pratense HOM05D000014 ORTHO05D011222 1.5e-15 87.4 57 66.7
TPR.G3663 Trifolium pratense HOM05D009488 ORTHO05D011222 2.2e-14 83.6 57 64.9
TPR.G40667 Trifolium pratense HOM05D009488 ORTHO05D011222 2.2e-14 83.6 206 32.0
Medtr3g026190 Medicago truncatula HOM05D000572 ORTHO05D002399 1.9e-13 80.5 113 44.2
Medtr0718s0010 Medicago truncatula HOM05D012401 ORTHO05D014590 1.7e-06 57.4 60 46.7
TPR.G412 Trifolium pratense HOM05D009488 ORTHO05D413357 1.7e-06 57.4 156 32.7


User provided reference genes

Program Settings