Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr3g023970 Medicago truncatula HOM05D007728 ORTHO05D022933 0.0e+00 1113.6 552 100.0
Medtr5g023720 Medicago truncatula HOM05D007728 ORTHO05D009681 1.6e-50 204.9 369 32.0
Medtr0268s0040 Medicago truncatula HOM05D035021 ORTHO05D022933 3.8e-44 183.7 600 27.8
Medtr6g061910 Medicago truncatula HOM05D035021 ORTHO05D022933 1.5e-40 171.8 566 28.1
Lj5g0008262 Lotus japonicus HOM05D007728 ORTHO05D009681 6.2e-39 166.4 258 33.7
Lj4g0006777 Lotus japonicus HOM05D007728 ORTHO05D009681 8.1e-39 166.0 267 35.2
Lj6g0011981 Lotus japonicus HOM05D007728 ORTHO05D009681 3.1e-38 164.1 270 33.3
Lj4g0017512 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-37 161.8 297 33.7
Lj2g0007737 Lotus japonicus HOM05D007728 ORTHO05D009681 1.7e-36 158.3 497 27.4
Medtr5g054010 Medicago truncatula HOM05D035021 ORTHO05D022933 4.9e-36 156.8 351 32.2
TPR.G27876 Trifolium pratense HOM05D061328 ORTHO05D022933 4.9e-36 156.8 419 30.5
Lj3g0019926 Lotus japonicus HOM05D007728 ORTHO05D009681 1.4e-35 155.2 265 32.5
Medtr6g471840 Medicago truncatula HOM05D007728 ORTHO05D009681 2.1e-34 151.4 259 32.8
Lj4g0018110 Lotus japonicus HOM05D007728 ORTHO05D009681 3.5e-34 150.6 299 31.8
Lj1g0008845 Lotus japonicus HOM05D002252 ORTHO05D002451 1.3e-33 148.7 264 32.6
Lj4g0000724 Lotus japonicus HOM05D002252 ORTHO05D002451 1.3e-33 148.7 264 32.6
Lj4g0000914 Lotus japonicus HOM05D007728 ORTHO05D009681 1.8e-33 148.3 257 33.9
Lj6g0010635 Lotus japonicus HOM05D007728 ORTHO05D009681 2.3e-33 147.9 256 34.0
Lj3g0006822 Lotus japonicus HOM05D040744 ORTHO05D009681 7.4e-32 142.9 276 32.6
Lj3g0016118 Lotus japonicus HOM05D007728 ORTHO05D009681 9.6e-32 142.5 262 31.3
Lj3g0002464 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-30 139.0 218 35.3
arahy.Tifrunner.gnm1.ann1.K8WX4Q Arachis hypogaea HOM05D014551 ORTHO05D009681 2.4e-30 137.9 265 29.8
Lj1g0018604 Lotus japonicus HOM05D007728 ORTHO05D009681 2.0e-29 134.8 497 26.4
Lj4g0000181 Lotus japonicus HOM05D007728 ORTHO05D009681 5.8e-29 133.3 199 31.7
Lj4g0001150 Lotus japonicus HOM05D007728 ORTHO05D009681 5.8e-29 133.3 199 31.7
Lj3g0005611 Lotus japonicus HOM05D007728 ORTHO05D009681 7.6e-29 132.9 329 28.9
arahy.Tifrunner.gnm1.ann1.CYJA9T Arachis hypogaea HOM05D007728 ORTHO05D009681 1.3e-28 132.1 293 28.7
Lj1g0027806 Lotus japonicus HOM05D007728 ORTHO05D009681 4.9e-28 130.2 276 30.4
Lj4g0023843 Lotus japonicus HOM05D007728 ORTHO05D009681 6.5e-28 129.8 199 31.2
LjContig00357g0010761 Lotus japonicus HOM05D007728 ORTHO05D009681 2.5e-27 127.9 276 29.3
Lj6g0022050 Lotus japonicus HOM05D007728 ORTHO05D009681 9.3e-27 125.9 303 27.4
arahy.Tifrunner.gnm1.ann1.MRZ5LS Arachis hypogaea HOM05D007728 ORTHO05D009681 2.3e-25 121.3 213 29.6
Lj1g0027147 Lotus japonicus HOM05D007728 ORTHO05D009681 3.9e-25 120.6 276 29.3
arahy.Tifrunner.gnm1.ann1.FLR77E Arachis hypogaea HOM05D007728 ORTHO05D021507 8.7e-25 119.4 235 30.2
Lj4g0022567 Lotus japonicus HOM05D007728 ORTHO05D009681 4.3e-24 117.1 180 31.1
Lj5g0019189 Lotus japonicus HOM05D007728 ORTHO05D009681 4.3e-24 117.1 250 28.8
arahy.Tifrunner.gnm1.ann1.F1MI29 Arachis hypogaea HOM05D008607 ORTHO05D010784 7.4e-24 116.3 257 27.2
Lj4g0019282 Lotus japonicus HOM05D007728 ORTHO05D009681 7.4e-24 116.3 172 33.7
TPR.G37581 Trifolium pratense HOM05D007728 ORTHO05D009681 1.6e-23 115.2 351 26.5
arahy.Tifrunner.gnm1.ann1.26YFK1 Arachis hypogaea HOM05D007728 ORTHO05D021507 2.8e-23 114.4 238 30.3
arahy.Tifrunner.gnm1.ann1.NMLT85 Arachis hypogaea HOM05D007728 ORTHO05D021507 3.7e-23 114.0 235 29.4
Lj1g0007911 Lotus japonicus HOM05D007728 ORTHO05D009681 8.2e-23 112.8 233 29.2
Lj4g0007695 Lotus japonicus HOM05D007728 ORTHO05D009681 1.8e-22 111.7 217 30.9
Lj6g0022916 Lotus japonicus HOM05D007728 ORTHO05D009681 3.1e-22 110.9 311 26.7
arahy.Tifrunner.gnm1.ann1.AR083C Arachis hypogaea HOM05D038934 ORTHO05D021507 4.1e-22 110.5 188 33.5
Lj6g0001515 Lotus japonicus HOM05D007728 ORTHO05D009681 9.0e-22 109.4 221 30.3
TPR.G2699 Trifolium pratense HOM05D000045 ORTHO05D000067 4.5e-21 107.1 234 28.6
Lj5g0007568 Lotus japonicus HOM05D007728 ORTHO05D009681 7.6e-21 106.3 177 29.4
Lj4g0023855 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-20 105.5 162 35.8
Lj4g0015611 Lotus japonicus HOM05D007728 ORTHO05D009681 1.7e-20 105.1 235 28.5
Lj1g0024522 Lotus japonicus HOM05D007728 ORTHO05D009681 8.5e-20 102.8 182 29.7
Lj4g0027426 Lotus japonicus HOM05D007728 ORTHO05D009681 8.5e-20 102.8 499 22.4
Lj3g0004344 Lotus japonicus HOM05D007728 ORTHO05D009681 1.4e-19 102.1 217 29.0
arahy.Tifrunner.gnm1.ann1.RT05UY Arachis hypogaea HOM05D009036 ORTHO05D011872 1.9e-19 101.7 260 27.3
arahy.Tifrunner.gnm1.ann1.S3PUKV Arachis hypogaea HOM05D009036 ORTHO05D011872 7.2e-19 99.8 256 26.2
arahy.Tifrunner.gnm1.ann1.TSP5BT Arachis hypogaea HOM05D009036 ORTHO05D011872 7.2e-19 99.8 177 31.1
arahy.Tifrunner.gnm1.ann1.P8R7I9 Arachis hypogaea HOM05D009036 ORTHO05D011872 2.7e-18 97.8 177 30.5
Medtr1g070355 Medicago truncatula HOM05D000045 ORTHO05D007522 4.6e-18 97.1 283 24.4
arahy.Tifrunner.gnm1.ann1.DQEM0F Arachis hypogaea HOM05D009036 ORTHO05D011872 1.8e-17 95.1 257 26.5
Lj1g0003216 Lotus japonicus HOM05D007728 ORTHO05D009681 1.8e-17 95.1 327 25.4
Lj1g0001720 Lotus japonicus HOM05D007728 ORTHO05D009681 6.7e-17 93.2 314 24.5
Lj6g0019939 Lotus japonicus HOM05D007728 ORTHO05D009681 8.7e-17 92.8 171 27.5
Lj2g0021840 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-16 92.4 260 26.9
Lj5g0026008 Lotus japonicus HOM05D016573 ORTHO05D009681 2.5e-16 91.3 160 31.9
Lj5g0016739 Lotus japonicus HOM05D024850 ORTHO05D025768 3.3e-16 90.9 281 25.3
arahy.Tifrunner.gnm1.ann1.WWA99J Arachis hypogaea HOM05D008607 ORTHO05D010784 4.3e-16 90.5 346 24.6
arahy.Tifrunner.gnm1.ann1.9R8PUV Arachis hypogaea HOM05D008607 ORTHO05D010784 5.7e-16 90.1 257 24.9
arahy.Tifrunner.gnm1.ann1.2QX347 Arachis hypogaea HOM05D009036 ORTHO05D011872 9.7e-16 89.4 265 27.5
arahy.Tifrunner.gnm1.ann1.UYMN7S Arachis hypogaea HOM05D008607 ORTHO05D010784 1.3e-15 89.0 257 24.1
arahy.Tifrunner.gnm1.ann1.F05QJ0 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.2e-15 88.2 328 25.6
Lj4g0006061 Lotus japonicus HOM05D007728 ORTHO05D009681 2.2e-15 88.2 164 31.1
arahy.Tifrunner.gnm1.ann1.6ZP1HE Arachis hypogaea HOM05D007728 ORTHO05D021507 2.8e-15 87.8 176 27.8
arahy.Tifrunner.gnm1.ann1.LCEB5E Arachis hypogaea HOM05D009036 ORTHO05D011872 3.7e-15 87.4 177 29.9
Lj5g0000777 Lotus japonicus HOM05D024850 ORTHO05D025768 6.3e-15 86.7 273 24.2
arahy.Tifrunner.gnm1.ann1.D9VETH Arachis hypogaea HOM05D008607 ORTHO05D010784 1.8e-14 85.1 302 23.8
TPR.G37698 Trifolium pratense HOM05D007728 ORTHO05D025857 1.8e-14 85.1 147 31.3
arahy.Tifrunner.gnm1.ann1.E3DKLZ Arachis hypogaea HOM05D009036 ORTHO05D011872 3.4e-13 80.9 538 21.0
arahy.Tifrunner.gnm1.ann1.RA57MB Arachis hypogaea HOM05D008645 ORTHO05D007788 7.7e-13 79.7 259 25.5
arahy.Tifrunner.gnm1.ann1.8HM2EW Arachis hypogaea HOM05D008607 ORTHO05D010784 2.2e-12 78.2 215 24.7
arahy.Tifrunner.gnm1.ann1.WZZH7X Arachis hypogaea HOM05D008607 ORTHO05D010784 2.2e-12 78.2 215 24.7
arahy.Tifrunner.gnm1.ann1.IPN40Q Arachis hypogaea HOM05D008607 ORTHO05D010784 2.9e-12 77.8 255 23.9
arahy.Tifrunner.gnm1.ann1.3VIF24 Arachis hypogaea HOM05D009036 ORTHO05D011872 6.5e-12 76.6 257 26.1
arahy.Tifrunner.gnm1.ann1.CQ2DU1 Arachis hypogaea HOM05D008607 ORTHO05D010784 9.4e-11 72.8 175 27.4
arahy.Tifrunner.gnm1.ann1.IRL4YX Arachis hypogaea HOM05D008645 ORTHO05D007788 1.6e-10 72.0 259 25.9
arahy.Tifrunner.gnm1.ann1.AXL83M Arachis hypogaea HOM05D008645 ORTHO05D007788 2.7e-10 71.2 274 25.5
TPR.G32079 Trifolium pratense HOM05D061328 ORTHO05D022933 3.6e-10 70.9 173 30.6
Lj3g0012082 Lotus japonicus HOM05D007728 ORTHO05D009681 4.7e-10 70.5 146 26.7
arahy.Tifrunner.gnm1.ann1.6XKL96 Arachis hypogaea HOM05D008645 ORTHO05D007788 6.1e-10 70.1 170 26.5
arahy.Tifrunner.gnm1.ann1.63191C Arachis hypogaea HOM05D014551 ORTHO05D009681 7.9e-10 69.7 289 22.1
Medtr6g045620 Medicago truncatula HOM05D007728 ORTHO05D010784 7.9e-10 69.7 170 29.4
arahy.Tifrunner.gnm1.ann1.PRU9CS Arachis hypogaea HOM05D009036 ORTHO05D011872 1.0e-09 69.3 177 25.4
arahy.Tifrunner.gnm1.ann1.LVQ59A Arachis hypogaea HOM05D008607 ORTHO05D010784 1.4e-09 68.9 214 25.7
arahy.Tifrunner.gnm1.ann1.PLAG74 Arachis hypogaea HOM05D009036 ORTHO05D011872 3.0e-09 67.8 178 27.5
arahy.Tifrunner.gnm1.ann1.5WRS92 Arachis hypogaea HOM05D008645 ORTHO05D007788 3.9e-09 67.4 227 23.8
arahy.Tifrunner.gnm1.ann1.D6JZRQ Arachis hypogaea HOM05D008645 ORTHO05D007788 5.1e-09 67.0 258 24.8
Lalb_Chr06g0171961 Lupinus albus HOM05D007728 ORTHO05D009681 5.1e-09 67.0 125 29.6
arahy.Tifrunner.gnm1.ann1.7CZB22 Arachis hypogaea HOM05D009036 ORTHO05D011872 6.7e-09 66.6 170 22.9
Lj1g0023634 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-08 65.5 136 27.9
arahy.Tifrunner.gnm1.ann1.E81N8H Arachis hypogaea HOM05D009036 ORTHO05D011872 2.6e-08 64.7 187 23.0
Lj1g0000596 Lotus japonicus HOM05D007728 ORTHO05D009681 5.7e-08 63.5 90 33.3
arahy.Tifrunner.gnm1.ann1.LY0M21 Arachis hypogaea HOM05D009036 ORTHO05D086877 7.4e-08 63.2 178 27.5
Lj4g0011622 Lotus japonicus HOM05D016573 ORTHO05D009681 7.4e-08 63.2 262 22.5
TPR.G119 Trifolium pratense HOM05D007728 ORTHO05D036499 7.4e-08 63.2 86 36.0
arahy.Tifrunner.gnm1.ann1.4TSV6W Arachis hypogaea HOM05D008645 ORTHO05D007788 1.3e-07 62.4 255 23.5
arahy.Tifrunner.gnm1.ann1.AL9EYS Arachis hypogaea HOM05D008645 ORTHO05D007788 1.3e-07 62.4 255 23.5
arahy.Tifrunner.gnm1.ann1.GI9T10 Arachis hypogaea HOM05D008645 ORTHO05D007788 1.3e-07 62.4 255 23.5
arahy.Tifrunner.gnm1.ann1.1776EG Arachis hypogaea HOM05D009036 ORTHO05D011872 1.7e-07 62.0 87 34.5
Medtr4g040020 Medicago truncatula HOM05D009725 ORTHO05D007788 3.7e-07 60.8 173 27.7
arahy.Tifrunner.gnm1.ann1.I7VPNZ Arachis hypogaea HOM05D009036 ORTHO05D011872 4.8e-07 60.5 91 30.8
arahy.Tifrunner.gnm1.ann1.M3GBHV Arachis hypogaea HOM05D009036 ORTHO05D011872 4.8e-07 60.5 163 26.4
Lj1g0022308 Lotus japonicus HOM05D024850 ORTHO05D025768 4.8e-07 60.5 156 28.8
arahy.Tifrunner.gnm1.ann1.K1ZRFD Arachis hypogaea HOM05D009036 ORTHO05D011872 6.3e-07 60.1 166 24.1
Lj1g0002377 Lotus japonicus HOM05D024850 ORTHO05D025768 1.1e-06 59.3 153 27.5
Lj5g0007878 Lotus japonicus HOM05D024850 ORTHO05D025768 1.1e-06 59.3 148 28.4
Glyma.05G077850 Glycine max HOM05D007728 ORTHO05D009681 1.8e-06 58.5 105 30.5
arahy.Tifrunner.gnm1.ann1.Y9CTG1 Arachis hypogaea HOM05D008645 ORTHO05D007788 2.4e-06 58.2 132 27.3
arahy.Tifrunner.gnm1.ann1.TLC2KB Arachis hypogaea HOM05D009036 ORTHO05D011872 5.3e-06 57.0 124 23.4
Lj4g0022736 Lotus japonicus HOM05D000045 ORTHO05D007788 6.9e-06 56.6 257 23.0


User provided reference genes

Program Settings