Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr3g020880 Medicago truncatula HOM05D007791 ORTHO05D000653 4.2e-40 167.5 82 100.0
Medtr3g020970 Medicago truncatula HOM05D007791 ORTHO05D000653 2.2e-25 118.6 99 64.6
Medtr3g020930 Medicago truncatula HOM05D007791 ORTHO05D000653 6.4e-25 117.1 69 87.0
Glyma.11G151000 Glycine max HOM05D007791 ORTHO05D000653 8.4e-25 116.7 99 63.6
Phvul.005G032000 Phaseolus vulgaris HOM05D007791 ORTHO05D000653 2.3e-22 108.6 96 63.5
TPR.G3886 Trifolium pratense HOM05D007791 ORTHO05D000653 5.6e-21 104.0 99 57.6
Medtr3g020800 Medicago truncatula HOM05D007791 ORTHO05D000653 1.6e-20 102.4 99 57.6
TPR.G3882 Trifolium pratense HOM05D007791 ORTHO05D000653 8.1e-20 100.1 97 52.6
TPR.G35313 Trifolium pratense HOM05D007791 ORTHO05D000653 5.3e-19 97.4 99 54.5
Psat1g089000 Pisum sativum HOM05D007791 ORTHO05D000653 3.4e-18 94.7 99 54.5
Lj3g0002224 Lotus japonicus HOM05D007791 ORTHO05D000653 3.8e-17 91.3 96 55.2
arahy.Tifrunner.gnm1.ann1.NKRP5F Arachis hypogaea HOM05D007791 ORTHO05D000653 7.1e-16 87.0 100 48.0
arahy.Tifrunner.gnm1.ann1.0A2T8K Arachis hypogaea HOM05D007791 ORTHO05D000653 3.0e-14 81.6 100 45.0
TWI74G0823 Tripterygium wilfordii HOM05D007791 ORTHO05D000653 1.8e-11 72.4 93 48.4
Cc04_g14510 Coffea canephora HOM05D007791 ORTHO05D000653 2.4e-11 72.0 99 44.4
Oeu006881.1 Olea europaea HOM05D007791 ORTHO05D000653 9.0e-11 70.1 64 54.7
PSO063G1561 Papaver somniferum HOM05D007791 ORTHO05D000653 9.0e-11 70.1 79 48.1
Ciclev10013177m.g Citrus clementina HOM05D007791 ORTHO05D000653 1.5e-10 69.3 63 54.0
Dinv37146 Davidia involucrata HOM05D007791 ORTHO05D000653 1.5e-10 69.3 90 44.4
CsaV3_4G025200 Cucumis sativus L. HOM05D007791 ORTHO05D000653 2.0e-10 68.9 66 54.5
Atru.chr8.2026 Acer truncatum HOM05D007791 ORTHO05D000653 5.8e-10 67.4 103 40.8
Peaxi162Scf00013g00738 Petunia axillaris HOM05D007791 ORTHO05D000653 5.8e-10 67.4 86 41.9
CSS0008915 Camellia sinensis var. sinensis HOM05D007791 ORTHO05D000653 1.0e-09 66.6 64 57.8
PGSC0003DMG400004064 Solanum tuberosum HOM05D007791 ORTHO05D000653 2.2e-09 65.5 88 40.9
Atru.chr8.2017 Acer truncatum HOM05D007791 ORTHO05D000653 2.9e-09 65.1 103 41.7
ECA248G2888 Erigeron canadensis HOM05D007791 ORTHO05D000653 2.9e-09 65.1 87 41.4
Nitab4.5_0002449g0040 Nicotiana tabacum HOM05D002101 ORTHO05D002126 2.9e-09 65.1 78 43.6
ATR0559G001 Amborella trichopoda HOM05D007791 ORTHO05D000653 3.8e-09 64.7 66 47.0
CSS0023434 Camellia sinensis var. sinensis HOM05D007791 ORTHO05D000653 5.0e-09 64.3 96 49.0
CSS0036268 Camellia sinensis var. sinensis HOM05D007791 ORTHO05D000653 5.0e-09 64.3 96 49.0
Potri.006G088700 Populus trichocarpa HOM05D007791 ORTHO05D000653 5.0e-09 64.3 68 51.5
Cpa.g.sc228.1 Carica papaya HOM05D007791 ORTHO05D000653 6.5e-09 63.9 64 53.1
Manes.09G094800 Manihot esculenta HOM05D007791 ORTHO05D000653 6.5e-09 63.9 77 46.8
Nitab4.5_0007505g0010 Nicotiana tabacum HOM05D002101 ORTHO05D002126 6.5e-09 63.9 64 46.9
Lsat_1_v5_gn_5_153840 Lactuca sativa HOM05D007791 ORTHO05D000653 8.4e-09 63.5 88 44.3
Potri.006G088500 Populus trichocarpa HOM05D007791 ORTHO05D000653 8.4e-09 63.5 68 51.5
Potri.006G088616 Populus trichocarpa HOM05D007791 ORTHO05D000653 8.4e-09 63.5 68 51.5
Rhsim05G0195200 Rhododendron simsii HOM05D007791 ORTHO05D000653 8.4e-09 63.5 88 50.0
Solyc06g069400.4 Solanum lycopersicum HOM05D002101 ORTHO05D002126 8.4e-09 63.5 96 39.6
GSVIVG01034125001 Vitis vinifera HOM05D007791 ORTHO05D000653 1.9e-08 62.4 64 48.4
Migut.J00302 Erythranthe guttata HOM05D007791 ORTHO05D000653 2.5e-08 62.0 90 45.6
HanXRQChr05g0136961 Helianthus annuus HOM05D007791 ORTHO05D000653 2.5e-08 62.0 88 44.3
Potri.006G088664 Populus trichocarpa HOM05D007791 ORTHO05D000653 3.2e-08 61.6 68 51.5
CAN.G587.57 Capsicum annuum HOM05D007791 ORTHO05D000653 4.2e-08 61.2 64 46.9
Rhsim05G0195100 Rhododendron simsii HOM05D007791 ORTHO05D000653 4.2e-08 61.2 81 43.2
Sopen06g026680 Solanum pennellii HOM05D007791 ORTHO05D000653 4.2e-08 61.2 96 38.5
Gohir.D04G122900 Gossypium hirsutum HOM05D007791 ORTHO05D000653 7.1e-08 60.5 64 51.6
DCAR_010421 Daucus carota HOM05D007791 ORTHO05D000653 9.3e-08 60.1 93 37.6
Gohir.A04G084100 Gossypium hirsutum HOM05D007791 ORTHO05D000653 9.3e-08 60.1 64 51.6
COL.COLO4_14751 Corchorus olitorius HOM05D007791 ORTHO05D000653 1.6e-07 59.3 68 50.0
Gorai.012G105800 Gossypium raimondii HOM05D007791 ORTHO05D000653 1.6e-07 59.3 64 50.0
Eucgr.A01291 Eucalyptus grandis HOM05D007791 ORTHO05D000653 3.5e-07 58.2 67 46.3
Thecc.05G034600 Theobroma cacao HOM05D007791 ORTHO05D000653 4.6e-07 57.8 93 40.9
Duzib106G0108 Durio zibethinus HOM05D007791 ORTHO05D000653 6.1e-07 57.4 94 40.4
Duzib106G0736 Durio zibethinus HOM05D007791 ORTHO05D000653 6.1e-07 57.4 93 39.8
Rhsim05G0195400 Rhododendron simsii HOM05D007791 ORTHO05D000653 6.1e-07 57.4 88 45.5
PGR031G1849 Punica granatum HOM05D007791 ORTHO05D000653 7.9e-07 57.0 106 38.7
Zm00001eb138720 Zea mays HOM05D007791 ORTHO05D000653 7.9e-07 57.0 62 43.5
TAR623G1446 Trochodendron aralioides HOM05D007791 ORTHO05D000653 1.8e-06 55.8 85 40.0
HPP92_012980 Vanilla planifolia HOM05D007791 ORTHO05D000653 3.0e-06 55.1 77 37.7
Thecc.05G034800 Theobroma cacao HOM05D007791 ORTHO05D000653 6.7e-06 53.9 93 38.7
SEGI_12735 Sequoiadendron giganteum HOM05D007791 ORTHO05D000653 8.7e-06 53.5 101 35.6


User provided reference genes

Program Settings