Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr3g014760 Medicago truncatula HOM05D011422 ORTHO05D011575 7.9e-169 597.0 304 100.0
Medtr1g050140 Medicago truncatula HOM05D011422 ORTHO05D011575 4.5e-164 581.3 310 96.5
Medtr4g131860 Medicago truncatula HOM05D011422 ORTHO05D011575 5.8e-164 580.9 310 97.1
Medtr7g102530 Medicago truncatula HOM05D011422 ORTHO05D011575 4.9e-163 577.8 310 96.8
Medtr1g054570 Medicago truncatula HOM05D011422 ORTHO05D011575 1.9e-77 293.5 153 99.3
Medtr3g037620 Medicago truncatula HOM05D011422 ORTHO05D011575 2.6e-71 273.1 153 94.1
Lj5g0006938 Lotus japonicus HOM05D011422 ORTHO05D011575 1.6e-36 157.5 164 45.7
Lj1g0003267 Lotus japonicus HOM05D011422 ORTHO05D011575 6.7e-35 152.1 164 44.5
Medtr6g464160 Medicago truncatula HOM05D011422 ORTHO05D011575 3.6e-28 129.8 77 85.7
Lj3g0025460 Lotus japonicus HOM05D011422 ORTHO05D011575 5.7e-26 122.5 163 39.9
VMungo0251G2311 Vigna mungo HOM05D009237 ORTHO05D010310 3.4e-23 113.2 149 39.6
VMungo0251G1137 Vigna mungo HOM05D012259 ORTHO05D008631 1.3e-22 111.3 161 37.3
VMungo0540G2361 Vigna mungo HOM05D012259 ORTHO05D008631 3.8e-22 109.8 161 37.3
VMungo0464G0039 Vigna mungo HOM05D012259 ORTHO05D008631 6.5e-22 109.0 161 37.3
VMungo1383G1008 Vigna mungo HOM05D012259 ORTHO05D008631 8.5e-22 108.6 161 37.3
VMungo0251G2546 Vigna mungo HOM05D013610 ORTHO05D010310 1.2e-20 104.8 174 35.1
VMungo0720G1609 Vigna mungo HOM05D013610 ORTHO05D010310 1.2e-20 104.8 374 25.7
Medtr6g044400 Medicago truncatula HOM05D011422 ORTHO05D011575 2.1e-20 104.0 67 83.6
TPR.G10672 Trifolium pratense HOM05D020642 ORTHO05D011575 2.7e-20 103.6 212 30.2
TPR.G18321 Trifolium pratense HOM05D011422 ORTHO05D011575 2.3e-19 100.5 316 26.3
VMungo1309G1997 Vigna mungo HOM05D002593 ORTHO05D006476 1.1e-18 98.2 158 34.8
Phvul.003G085101 Phaseolus vulgaris HOM05D015555 ORTHO05D010310 2.0e-18 97.4 132 37.1
VMungo0464G1806 Vigna mungo HOM05D009237 ORTHO05D010310 1.8e-16 90.9 158 34.8
Medtr0186s0120 Medicago truncatula HOM05D020734 ORTHO05D011575 3.1e-16 90.1 120 35.0
VMungo0540G0383 Vigna mungo HOM05D000040 ORTHO05D001305 4.1e-16 89.7 157 30.6
VMungo1309G0517 Vigna mungo HOM05D008141 ORTHO05D008631 2.0e-15 87.4 150 32.7
VMungo1215G1052 Vigna mungo HOM05D009237 ORTHO05D010310 7.7e-15 85.5 107 40.2
VMungo0720G0480 Vigna mungo HOM05D008141 ORTHO05D008631 1.3e-14 84.7 131 33.6
VMungo1080G1255 Vigna mungo HOM05D008141 ORTHO05D008631 1.3e-14 84.7 147 27.9
VMungo1127G1126 Vigna mungo HOM05D000005 ORTHO05D000012 2.2e-14 84.0 152 32.9
VMungo1383G2226 Vigna mungo HOM05D008141 ORTHO05D008631 2.2e-14 84.0 131 32.1
TPR.G9420 Trifolium pratense HOM05D011422 ORTHO05D011575 3.2e-13 80.1 154 39.0
VMungo1127G0057 Vigna mungo HOM05D008141 ORTHO05D008631 4.2e-13 79.7 130 30.8
VMungo1309G2316 Vigna mungo HOM05D008141 ORTHO05D008631 9.4e-13 78.6 130 30.0
GSVIVG01030186001 Vitis vinifera HOM05D000176 ORTHO05D000106 1.8e-11 74.3 152 33.6
Phvul.002G203500 Phaseolus vulgaris HOM05D015555 ORTHO05D010310 3.0e-11 73.6 106 34.0
Duzib151G0015 Durio zibethinus HOM05D000176 ORTHO05D000106 6.7e-11 72.4 148 33.1
AUR62029727 Chenopodium quinoa HOM05D000176 ORTHO05D000106 1.5e-10 71.2 147 32.7
Hund03714 Selenicereus undatus HOM05D000176 ORTHO05D000106 2.0e-10 70.9 148 34.5
VMungo0331G0996 Vigna mungo HOM05D008141 ORTHO05D008631 2.0e-10 70.9 142 27.5
VMungo0464G0937 Vigna mungo HOM05D008141 ORTHO05D008631 2.0e-10 70.9 205 26.3
Peaxi162Scf00146g01211 Petunia axillaris HOM05D000176 ORTHO05D000106 2.6e-10 70.5 139 33.8
VMungo0464G1275 Vigna mungo HOM05D009237 ORTHO05D010310 3.3e-10 70.1 89 40.4
Gorai.011G127800 Gossypium raimondii HOM05D000176 ORTHO05D000106 9.7e-10 68.6 149 30.9
ScUNg0001080 Simmondsia chinensis HOM05D007651 ORTHO05D000106 9.7e-10 68.6 152 31.6
AUR62006387 Chenopodium quinoa HOM05D000176 ORTHO05D000106 1.3e-09 68.2 148 32.4
Nn5g26857 Nelumbo nucifera HOM05D000176 ORTHO05D000106 1.3e-09 68.2 143 29.4
Sc02g0000190 Simmondsia chinensis HOM05D000176 ORTHO05D000106 1.7e-09 67.8 161 29.8
Actinidia29034 Actinidia chinensis HOM05D000176 ORTHO05D000106 2.2e-09 67.4 139 33.8
Nitab4.5_0008402g0020 Nicotiana tabacum HOM05D000176 ORTHO05D000106 2.2e-09 67.4 145 33.1
Phvul.003G065600 Phaseolus vulgaris HOM05D015555 ORTHO05D010310 2.8e-09 67.0 105 36.2
VMungo1383G1970 Vigna mungo HOM05D009237 ORTHO05D010310 3.7e-09 66.6 88 37.5
Medtr3g462550 Medicago truncatula HOM05D011422 ORTHO05D011575 4.8e-09 66.2 59 59.3
Dinv11360 Davidia involucrata HOM05D000176 ORTHO05D000106 6.3e-09 65.9 140 34.3
Dinv16983 Davidia involucrata HOM05D000176 ORTHO05D000106 6.3e-09 65.9 140 34.3
Nitab4.5_0000381g0110 Nicotiana tabacum HOM05D000176 ORTHO05D000106 6.3e-09 65.9 145 33.8
Solyc10g085700.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 8.2e-09 65.5 143 32.9
VMungo0647G2586 Vigna mungo HOM05D009237 ORTHO05D010310 8.2e-09 65.5 89 37.1
EL10Ac2g02958 Beta vulgaris HOM05D000176 ORTHO05D000106 2.4e-08 63.9 148 32.4
Cpa.g.sc0.116 Carica papaya HOM05D000176 ORTHO05D000106 4.1e-08 63.2 139 33.1
VMungo0251G1542 Vigna mungo HOM05D013610 ORTHO05D010310 4.1e-08 63.2 138 29.7
Aqoxy4G02403 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 9.1e-08 62.0 175 28.6
CANSAT35G1276 Cannabis sativa HOM05D000176 ORTHO05D000106 9.1e-08 62.0 151 28.5
TPR.G22870 Trifolium pratense HOM05D002391 ORTHO05D011575 9.1e-08 62.0 220 26.8
Eucgr.K01284 Eucalyptus grandis HOM05D007651 ORTHO05D000106 2.0e-07 60.8 137 32.8
VMungo1309G2242 Vigna mungo HOM05D013610 ORTHO05D010310 2.7e-07 60.5 85 34.1
Ah.08g209460 Amaranthus hybridus HOM05D000176 ORTHO05D000106 3.5e-07 60.1 148 30.4
COL.COLO4_16369 Corchorus olitorius HOM05D000176 ORTHO05D000106 3.5e-07 60.1 113 30.1
Haze_21153 Corylus avellana HOM05D007651 ORTHO05D000106 4.5e-07 59.7 139 30.9
VMungo1309G2786 Vigna mungo HOM05D004183 ORTHO05D005022 4.5e-07 59.7 83 37.3
HanXRQChr06g0181031 Helianthus annuus HOM05D000176 ORTHO05D000106 5.9e-07 59.3 153 30.1
Medtr3g014770 Medicago truncatula HOM05D020734 ORTHO05D011575 5.9e-07 59.3 70 38.6
VMungo0720G1221 Vigna mungo HOM05D013610 ORTHO05D010310 7.7e-07 58.9 264 23.9
VMungo1309G1393 Vigna mungo HOM05D002362 ORTHO05D010310 7.7e-07 58.9 149 26.8
Lalb_Chr12g0207711 Lupinus albus HOM05D000176 ORTHO05D000106 1.3e-06 58.2 138 30.4
VMungo1127G0442 Vigna mungo HOM05D008141 ORTHO05D008631 1.3e-06 58.2 107 26.2
Medtr1g050130 Medicago truncatula HOM05D020734 ORTHO05D011575 2.2e-06 57.4 70 37.1
Medtr1g054565 Medicago truncatula HOM05D020734 ORTHO05D011575 2.2e-06 57.4 70 37.1
Medtr4g131870 Medicago truncatula HOM05D020734 ORTHO05D011575 2.2e-06 57.4 70 37.1
vmacro20367 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 2.2e-06 57.4 141 32.6
VMungo1127G1584 Vigna mungo HOM05D001774 ORTHO05D001663 2.2e-06 57.4 68 41.2
VMungo1127G2178 Vigna mungo HOM05D000202 ORTHO05D000117 2.9e-06 57.0 68 41.2
TPR.G28634 Trifolium pratense HOM05D011422 ORTHO05D011575 3.8e-06 56.6 110 37.3
VMungo0720G0463 Vigna mungo HOM05D000002 ORTHO05D000001 8.5e-06 55.5 58 41.4


User provided reference genes

Program Settings