Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr3g007340 Medicago truncatula HOM05D000013 ORTHO05D262909 2.5e-40 168.3 85 100.0
VMungo1127G0340 Vigna mungo HOM05D000013 ORTHO05D000011 2.2e-12 75.5 62 56.5
TPR.G24506 Trifolium pratense HOM05D000013 ORTHO05D000011 2.9e-12 75.1 62 58.1
Glyma.12G103700 Glycine max HOM05D000013 ORTHO05D000011 3.8e-12 74.7 62 54.8
Lalb_Chr19g0135591 Lupinus albus HOM05D000013 ORTHO05D000011 3.8e-12 74.7 60 53.3
Phvul.011G108700 Phaseolus vulgaris HOM05D000013 ORTHO05D000011 3.2e-11 71.6 62 53.2
Prupe.3G226000 Prunus persica HOM05D000013 ORTHO05D000011 9.4e-11 70.1 59 50.8
Haze_13006 Corylus avellana HOM05D000013 ORTHO05D000011 3.6e-10 68.2 59 50.8
Ciclev10014273m.g Citrus clementina HOM05D000013 ORTHO05D000011 1.8e-09 65.9 60 43.3
Haze_18869 Corylus avellana HOM05D000013 ORTHO05D000011 3.0e-09 65.1 59 49.2
Cfa014487 Carpinus fangiana HOM05D000013 ORTHO05D000011 5.1e-09 64.3 59 45.8
Lj3g0017496 Lotus japonicus HOM05D000013 ORTHO05D000011 3.3e-08 61.6 61 50.8
FAN14G5895 Fragaria x ananassa HOM05D000013 ORTHO05D000011 5.7e-08 60.8 60 41.7
Atru.chr6.3101 Acer truncatum HOM05D000013 ORTHO05D000011 9.7e-08 60.1 59 42.4
QL08p034580 Quercus lobata HOM05D000013 ORTHO05D000011 9.7e-08 60.1 80 36.2
CiPaw.03G166000 Carya illinoinensis HOM05D000013 ORTHO05D000011 1.3e-07 59.7 61 45.9
FAN09G1411 Fragaria x ananassa HOM05D000013 ORTHO05D000011 1.3e-07 59.7 60 41.7
Medtr1g052880 Medicago truncatula HOM05D000013 ORTHO05D000011 1.3e-07 59.7 71 45.1
ClCG02G001470 Citrullus lanatus HOM05D000013 ORTHO05D000011 2.2e-07 58.9 60 45.0
Dinv02566 Davidia involucrata HOM05D000013 ORTHO05D000011 2.8e-07 58.5 60 45.0
FAN02G3386 Fragaria x ananassa HOM05D000013 ORTHO05D000011 3.7e-07 58.2 60 43.3
Glyma.12G198100 Glycine max HOM05D000013 ORTHO05D000011 4.8e-07 57.8 58 44.8
FvH4_6g44243 Fragaria vesca HOM05D000013 ORTHO05D000011 6.3e-07 57.4 60 38.3
TWI36G0092 Tripterygium wilfordii HOM05D000013 ORTHO05D000011 6.3e-07 57.4 59 42.4
arahy.Tifrunner.gnm1.ann1.8YG9UQ Arachis hypogaea HOM05D000013 ORTHO05D000011 8.2e-07 57.0 64 45.3
MD17G1087900 Malus domestica HOM05D000013 ORTHO05D000011 8.2e-07 57.0 60 50.0
Potri.013G150800 Populus trichocarpa HOM05D000013 ORTHO05D000011 8.2e-07 57.0 58 39.7
RcHm_v2.0_Chr2g0161021 Rosa chinensis HOM05D000013 ORTHO05D000011 8.2e-07 57.0 60 40.0
Dinv18573 Davidia involucrata HOM05D000013 ORTHO05D000011 1.1e-06 56.6 50 50.0
Thecc.02G166200 Theobroma cacao HOM05D000013 ORTHO05D000011 1.1e-06 56.6 81 35.8
arahy.Tifrunner.gnm1.ann1.RN8X55 Arachis hypogaea HOM05D000013 ORTHO05D000011 1.4e-06 56.2 64 43.8
CANSAT64G1465 Cannabis sativa HOM05D000013 ORTHO05D000011 1.4e-06 56.2 60 36.7
CiPaw.03G166400 Carya illinoinensis HOM05D000013 ORTHO05D000011 1.4e-06 56.2 61 44.3
Dinv02565 Davidia involucrata HOM05D000013 ORTHO05D000011 1.4e-06 56.2 55 45.5
Haze_13017 Corylus avellana HOM05D000013 ORTHO05D000011 2.4e-06 55.5 60 45.0
Dinv02568 Davidia involucrata HOM05D000013 ORTHO05D000011 2.4e-06 55.5 60 45.0
Glyma.12G198000 Glycine max HOM05D000013 ORTHO05D000011 2.4e-06 55.5 59 42.4
Glyma.13G303800 Glycine max HOM05D000013 ORTHO05D000011 3.1e-06 55.1 57 43.9
Cc04_g13490 Coffea canephora HOM05D000013 ORTHO05D000011 4.1e-06 54.7 57 45.6
Haze_13011 Corylus avellana HOM05D000013 ORTHO05D000011 4.1e-06 54.7 60 38.3
Dinv12209 Davidia involucrata HOM05D000013 ORTHO05D000011 4.1e-06 54.7 63 42.9
Sed0016677 Sechium edule HOM05D000013 ORTHO05D000011 4.1e-06 54.7 60 40.0
COL.COLO4_13054 Corchorus olitorius HOM05D000013 ORTHO05D000011 5.3e-06 54.3 60 38.3
Dinv02567 Davidia involucrata HOM05D000013 ORTHO05D000011 5.3e-06 54.3 54 42.6
THA.LOC104801193 Tarenaya hassleriana HOM05D000013 ORTHO05D000011 5.3e-06 54.3 83 34.9
VMungo1080G0506 Vigna mungo HOM05D000013 ORTHO05D000011 5.3e-06 54.3 60 41.7
CANSAT64G1603 Cannabis sativa HOM05D000013 ORTHO05D000011 6.9e-06 53.9 60 41.7
PGR142G1736 Punica granatum HOM05D000013 ORTHO05D000011 6.9e-06 53.9 61 39.3
QL08p034629 Quercus lobata HOM05D000013 ORTHO05D000011 6.9e-06 53.9 57 40.4
CAN.G640.12 Capsicum annuum HOM05D000013 ORTHO05D000011 9.1e-06 53.5 57 42.1
Eucgr.K00885 Eucalyptus grandis HOM05D000013 ORTHO05D000011 9.1e-06 53.5 66 40.9


User provided reference genes

Program Settings