Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g461570 Medicago truncatula HOM05D014907 ORTHO05D010556 7.0e-74 280.4 131 100.0
Psat1g126640 Pisum sativum HOM05D014907 ORTHO05D010556 4.0e-37 158.3 131 61.8
TPR.G17735 Trifolium pratense HOM05D014907 ORTHO05D010556 3.1e-29 132.1 134 54.5
Phvul.006G164600 Phaseolus vulgaris HOM05D014907 ORTHO05D010556 1.9e-23 112.8 137 47.4
Glyma.13G218125 Glycine max HOM05D014907 ORTHO05D010556 1.6e-22 109.8 128 45.3
Glyma.13G218100 Glycine max HOM05D014907 ORTHO05D010556 2.0e-20 102.8 131 42.7
Lalb_Chr18g0055471 Lupinus albus HOM05D014907 ORTHO05D010556 1.9e-18 96.3 131 42.7
Cpa.g.sc59.84 Carica papaya HOM05D031968 ORTHO05D010556 1.3e-08 63.5 98 32.7
Cfa014873 Carpinus fangiana HOM05D008849 ORTHO05D010556 1.3e-08 63.5 73 39.7
QL11p022534 Quercus lobata HOM05D008849 ORTHO05D010556 3.0e-08 62.4 105 33.3
CiPaw.01G204700 Carya illinoinensis HOM05D008849 ORTHO05D010556 3.9e-08 62.0 138 30.4
Potri.003G175100 Populus trichocarpa HOM05D008849 ORTHO05D010556 6.7e-08 61.2 137 33.6
Sabra03G0128400 Salix brachista HOM05D005430 ORTHO05D007814 1.1e-07 60.5 108 34.3
FvH4_4g05643 Fragaria vesca HOM05D008849 ORTHO05D010556 1.5e-07 60.1 127 30.7
Thecc.04G213000 Theobroma cacao HOM05D008849 ORTHO05D010556 5.7e-07 58.2 80 36.2
FAN17G2089 Fragaria x ananassa HOM05D008849 ORTHO05D010556 7.4e-07 57.8 128 29.7
Potri.001G053200 Populus trichocarpa HOM05D008849 ORTHO05D010556 9.7e-07 57.4 55 43.6
Manes.15G049200 Manihot esculenta HOM05D008849 ORTHO05D010556 2.8e-06 55.8 73 32.9
RcHm_v2.0_Chr4g0396831 Rosa chinensis HOM05D008849 ORTHO05D010556 3.7e-06 55.5 100 31.0
TPR.G26673 Trifolium pratense HOM05D014907 ORTHO05D010556 3.7e-06 55.5 89 34.8
Psat1g126680 Pisum sativum HOM05D014907 ORTHO05D010556 4.8e-06 55.1 40 60.0
CiPaw.16G074900 Carya illinoinensis HOM05D008849 ORTHO05D010556 6.3e-06 54.7 101 31.7
COL.COLO4_26204 Corchorus olitorius HOM05D008849 ORTHO05D010556 6.3e-06 54.7 99 29.3
FvH4_4g05650 Fragaria vesca HOM05D008849 ORTHO05D010556 6.3e-06 54.7 73 34.2


User provided reference genes

Program Settings